Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037861_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:140078685:140083862:1 gene:Zm00001d037861 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hexokinase8 description: hexokinase8
Sequence

ATGGGGAAGGCGCAGTGGTTGAGCGTAGCCTTGGGCTGCGCGGCGGCGGTGACGTGCGCG
GTGGCGACGGCGCTGGTAGCGAGGCGGGCGGTGGCGCGGTCTCGGTGGAGCAGAGCCGTG
GCGGTGGTGCGCAGGTTCGAGGAGGACTGCGCCACGCCCACGGAGCGCCTGCAGCGGATC
GTCAACTCCCTCTCCGTCGAGATGTTCGCGGGGCTCGCGTCCGAGGGCGCCAGCAAGGTC
CGGATGCTGCTCACCTGCGTAGACACGCTCCCCGACGGGAGTGAGGAAGGCGTCTACTAC
TCTGTTGATCTTGGGGGGACAAGTTTTAGAGTCATGAAACTAGAGCTTGGTCCAGGATCT
ACGATTATCAATAAAAAAGTTGAACATCAACCTATTCCAGAAGACTTGACCAAGGGTACG
AGCGAGGATTTATTCAATCTAATTGCCTTGGCATTAAAGAACTTCATTGGAAGAGAGGGT
GGGGGCGATGAGGGAAGGGCACTTGGTTTTACATTTTCCTTCCCCGTTAGACATATTTCC
ATATCCTCGGGATCGTTAATTAGGTGGACCAAGGAGTTTTCAATTGAAGAGGCTGTTGAA
AAAGATGTTGCTCAATGCTTGAATGAAGCTCTTGTTAGGAATGGACTGAATTTGCAGGTC
ACTGCATTGGTGAACAATGCTGTCGGTACATTGGCCATGGGGCACTATTATGATGAGGAT
ACAGTTGCTGCAGTGGTTATAGGAGCTGGTACCAATGCTTCCTATATTGAACGCAATGCC
GCTATCGCAAAATCTGAGGGCCTTCTTGACAAATCTGACGACATAACGGTTGTGAATGTA
GAATGGGGTAGTTTCCGGTCTCCTCTAATACCATTAACTCCTTATGACATATGCACCAGT
GAAGCAAAACGCAATCAATATGATCAAGCTTTTGAGAAAATGATCTCTGGTGTGTATCTT
GGGGAAATTGCTAGATTGGTATTCCAAGGAATGGCTCAAGAATCAGATTTATTTGGTCCA
TCTGTGAATTGCTTATCCACCCCTTTCGTATTAAGTACACCTTCTCTCGCTACTATTCGT
GAGGATGATTCCCCAGACCTTAGAGTAGTTGGTAGGGTGCTCGAAGAACATCTGAAGATG
CAGGATGTTCCAATGAAGACTCGGAGACTTGTTGTGAGAGTATGTGACATTGTAACTCGA
AGAGCCGCCCGTCTAGCAGCTGCTGGGATTGTTGCAGTGCTACAGAAAATTGGGCGTGAT
GGTAGTCTTTGCGGGACAACCTTGGTTCGAAAGATAAGAGGCGAGCCGAAGAGATCGGTT
GTCGCGATTGAAGGCGGTCTCTACCAAGGCTATTCGGTCTTCAAGGAGTATGTGAATGAA
GCGGTGGACGAGATCCTGGGGGATGAGATCGCCTCCACAGTTAGTCTTAGGGTTATGGAG
GATGGTTCAGTGATTGGGGCTGCACTCGTTGCGGCATCATACTCGTCATCGGCTAGAAAA
AATTCAGTGTAG

Peptide Sequence

PEP ID

Zm00001d037861_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:140078685:140083862:1 gene:Zm00001d037861 transcript:Zm00001d037861_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hexokinase8 description: hexokinase8
Sequence

MGKAQWLSVALGCAAAVTCAVATALVARRAVARSRWSRAVAVVRRFEEDCATPTERLQRI
VNSLSVEMFAGLASEGASKVRMLLTCVDTLPDGSEEGVYYSVDLGGTSFRVMKLELGPGS
TIINKKVEHQPIPEDLTKGTSEDLFNLIALALKNFIGREGGGDEGRALGFTFSFPVRHIS
ISSGSLIRWTKEFSIEEAVEKDVAQCLNEALVRNGLNLQVTALVNNAVGTLAMGHYYDED
TVAAVVIGAGTNASYIERNAAIAKSEGLLDKSDDITVVNVEWGSFRSPLIPLTPYDICTS
EAKRNQYDQAFEKMISGVYLGEIARLVFQGMAQESDLFGPSVNCLSTPFVLSTPSLATIR
EDDSPDLRVVGRVLEEHLKMQDVPMKTRRLVVRVCDIVTRRAARLAAAGIVAVLQKIGRD
GSLCGTTLVRKIRGEPKRSVVAIEGGLYQGYSVFKEYVNEAVDEILGDEIASTVSLRVME
DGSVIGAALVAASYSSSARKNSV

Transcript Sequence

Transcript ID

Zm00001d037861_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:140078685:140083862:1 gene:Zm00001d037861 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hexokinase8 description: hexokinase8
Sequence

ACGATTCCCCCGCTCCTCCCGATCGCGGTCAGTTCAGCCAGCCATATCGTTGAACGCCGC
GTCCAGCGCGCTAGCTCTCGAGCGCGCGGGCGGTGGGGCGGGCCGGAGTAAGGCGCGTCG
CGCGCGGGCGGGTCAGGACAGCTAGGGATCAATGGGGAAGGCGCAGTGGTTGAGCGTAGC
CTTGGGCTGCGCGGCGGCGGTGACGTGCGCGGTGGCGACGGCGCTGGTAGCGAGGCGGGC
GGTGGCGCGGTCTCGGTGGAGCAGAGCCGTGGCGGTGGTGCGCAGGTTCGAGGAGGACTG
CGCCACGCCCACGGAGCGCCTGCAGCGGATCGTCAACTCCCTCTCCGTCGAGATGTTCGC
GGGGCTCGCGTCCGAGGGCGCCAGCAAGGTCCGGATGCTGCTCACCTGCGTAGACACGCT
CCCCGACGGGAGTGAGGAAGGCGTCTACTACTCTGTTGATCTTGGGGGGACAAGTTTTAG
AGTCATGAAACTAGAGCTTGGTCCAGGATCTACGATTATCAATAAAAAAGTTGAACATCA
ACCTATTCCAGAAGACTTGACCAAGGGTACGAGCGAGGATTTATTCAATCTAATTGCCTT
GGCATTAAAGAACTTCATTGGAAGAGAGGGTGGGGGCGATGAGGGAAGGGCACTTGGTTT
TACATTTTCCTTCCCCGTTAGACATATTTCCATATCCTCGGGATCGTTAATTAGGTGGAC
CAAGGAGTTTTCAATTGAAGAGGCTGTTGAAAAAGATGTTGCTCAATGCTTGAATGAAGC
TCTTGTTAGGAATGGACTGAATTTGCAGGTCACTGCATTGGTGAACAATGCTGTCGGTAC
ATTGGCCATGGGGCACTATTATGATGAGGATACAGTTGCTGCAGTGGTTATAGGAGCTGG
TACCAATGCTTCCTATATTGAACGCAATGCCGCTATCGCAAAATCTGAGGGCCTTCTTGA
CAAATCTGACGACATAACGGTTGTGAATGTAGAATGGGGTAGTTTCCGGTCTCCTCTAAT
ACCATTAACTCCTTATGACATATGCACCAGTGAAGCAAAACGCAATCAATATGATCAAGC
TTTTGAGAAAATGATCTCTGGTGTGTATCTTGGGGAAATTGCTAGATTGGTATTCCAAGG
AATGGCTCAAGAATCAGATTTATTTGGTCCATCTGTGAATTGCTTATCCACCCCTTTCGT
ATTAAGTACACCTTCTCTCGCTACTATTCGTGAGGATGATTCCCCAGACCTTAGAGTAGT
TGGTAGGGTGCTCGAAGAACATCTGAAGATGCAGGATGTTCCAATGAAGACTCGGAGACT
TGTTGTGAGAGTATGTGACATTGTAACTCGAAGAGCCGCCCGTCTAGCAGCTGCTGGGAT
TGTTGCAGTGCTACAGAAAATTGGGCGTGATGGTAGTCTTTGCGGGACAACCTTGGTTCG
AAAGATAAGAGGCGAGCCGAAGAGATCGGTTGTCGCGATTGAAGGCGGTCTCTACCAAGG
CTATTCGGTCTTCAAGGAGTATGTGAATGAAGCGGTGGACGAGATCCTGGGGGATGAGAT
CGCCTCCACAGTTAGTCTTAGGGTTATGGAGGATGGTTCAGTGATTGGGGCTGCACTCGT
TGCGGCATCATACTCGTCATCGGCTAGAAAAAATTCAGTGTAGATATGTCGCTAGCTTAA
ACGATTTCCTGTATTGTTGTATTTTCTTCTCATCTATACAAACTGATGTCAAGTTCTAGT
AGTAGTGGATCATGCATTGCATATATAGGTGGCTAGCTATCAGTTGAGAGTTTAATACTA
CTGTTAGTGAACTATGAGGTATGAGCCCATCAATGTTGTAATGTTGATTGAATGAAATGC
TATGTCAATCCAGCTTGATCAA