Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037859_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:140001946:140006130:1 gene:Zm00001d037859 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:superoxide dismutase3 description:Superoxide dismutase

Sequence

ATGGCTCTCCGCACCCTGGCATCGAAGAAGGTCCTATCCTTCCCGTTCGGCGGCGCGGGC
CGGCCGTTGGCGGCGGCGGCGTCTGCGAGGGGGGTGACGACGGTCACACTCCCCGACCTC
TCCTACGACTTCATCGCGCTGGAACCGGCCATCTCGGGGGAGATCATGCGCTTGCACCAC
CAAAAGCACCACGCCACCTACGTCGCCAACTACAACAAGGCGCTGGAGCAGCTTGACACT
GCCGTCTCCAAGGGCGACGCCTCCGCTGTCGTCCAGCTGCAGGGCGCCATCAAGTTCAAC
GGCGGTGGTCATGTGAACCATTCAATCTTCTGGAAGAACCTCAAGCCCATTAGCGAAGGT
GGCGGGGAGCCGCCTCATGGGAAACTTGGCTGGGCCATCGATGAGGATTTTGGTTCGTTT
GAGGCACTTGTAAAGAAGATGAATGCAGAAGGCGCTGCTTTACAAGGGTCTGGATGGGTG
TGGTTAGCTTTGGATAAAGAGGCAAAAAAGCTTTCAGTTGAAACAACAGCTAATCAGGAT
CCTCTGGTGACTAAAGGTGCAAGCTTGGTTCCGCTGTTGGGGATTGATGTCTGGGAACAT
GCATACTACCTGCAGTACAAGAATGTTAGGCCGGATTACCTGAACAACATCTGGAAGGTG
ATGAACTGGAAATATGCTGGAGAGGTGTACGAAAATGTTCTTGCTTGA

Peptide Sequence

PEP ID

Zm00001d037859_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:140001946:140006130:1 gene:Zm00001d037859 transcript:Zm00001d037859_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:superoxide dismutase3 description:Superoxide dismutase

Sequence

MALRTLASKKVLSFPFGGAGRPLAAAASARGVTTVTLPDLSYDFIALEPAISGEIMRLHH
QKHHATYVANYNKALEQLDTAVSKGDASAVVQLQGAIKFNGGGHVNHSIFWKNLKPISEG
GGEPPHGKLGWAIDEDFGSFEALVKKMNAEGAALQGSGWVWLALDKEAKKLSVETTANQD
PLVTKGASLVPLLGIDVWEHAYYLQYKNVRPDYLNNIWKVMNWKYAGEVYENVLA

Transcript Sequence

Transcript ID

Zm00001d037859_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:140001946:140006130:1 gene:Zm00001d037859 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:superoxide dismutase3 description:Superoxide dismutase

Sequence

CCTGCAGTCACCCCCTTTCCCCCTCCATCTCGGTGTCAGACGCATACGCACCCAGGAGAT
ACAGCGAGCGAGCGACCAAAGCCATGGCTCTCCGCACCCTGGCATCGAAGAAGGTCCTAT
CCTTCCCGTTCGGCGGCGCGGGCCGGCCGTTGGCGGCGGCGGCGTCTGCGAGGGGGGTGA
CGACGGTCACACTCCCCGACCTCTCCTACGACTTCATCGCGCTGGAACCGGCCATCTCGG
GGGAGATCATGCGCTTGCACCACCAAAAGCACCACGCCACCTACGTCGCCAACTACAACA
AGGCGCTGGAGCAGCTTGACACTGCCGTCTCCAAGGGCGACGCCTCCGCTGTCGTCCAGC
TGCAGGGCGCCATCAAGTTCAACGGCGGTGGTCATGTGAACCATTCAATCTTCTGGAAGA
ACCTCAAGCCCATTAGCGAAGGTGGCGGGGAGCCGCCTCATGGGAAACTTGGCTGGGCCA
TCGATGAGGATTTTGGTTCGTTTGAGGCACTTGTAAAGAAGATGAATGCAGAAGGCGCTG
CTTTACAAGGGTCTGGATGGGTGTGGTTAGCTTTGGATAAAGAGGCAAAAAAGCTTTCAG
TTGAAACAACAGCTAATCAGGATCCTCTGGTGACTAAAGGTGCAAGCTTGGTTCCGCTGT
TGGGGATTGATGTCTGGGAACATGCATACTACCTGCAGTACAAGAATGTTAGGCCGGATT
ACCTGAACAACATCTGGAAGGTGATGAACTGGAAATATGCTGGAGAGGTGTACGAAAATG
TTCTTGCTTGAATTGTCTTAACGGACAATACACATCTGCGCGCGCGGGTTTCGGCTGTTT
GATCATGTGAAATAAAGATGGACCTGTCTAGCGGCTGGACCTTGTGTACATTTCACTGAG
ATAGACTAATGCACGGCCTGCCGATTTTGTTCGTCCTGCTTGCGTGCTACTCTGTCTCTG
CTCCTAGTTTTTGGCATCATGTTTATGTTGAGCAAGGTGATGCCCAAGGGAAGCCATTCC
CACTCTTGTCTCCATTAATAAAATCAGCTGAGCTTCCGATGTTTGCTTGAA