Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037830_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:139004086:139006575:1 gene:Zm00001d037830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGGCCACCGTCCGCTCCACCCTCCCACCCAGTCTCCCACCGCCATCCCCATCTTCACCT CCCGCTCACACCCTCGCGGCCACCTCCCGCCACCGCAAGCCTCTCACCACGACCGCAGCC GGGCAGGCGGCCCTCCAGCCATCCGAAGCGGCGGCGCTCCTCACGGCCGCAGCGCGCGCC CGCGACATCCACCTGGGCCGTGCACTCCAAGGCCACCTCCTCCGCACCGGGTCACTCCTC GAGACCGACGCCGTCGTCGCCAACTCGCTCCTCACGCTCTACTCCAAGTGCAGCGCCGTG GCCGCCGCGCGCAGCGTGTTCGACGGAATGCCCGTCGGCCTGCGGGACCTCGTCTCCTGG ACGGCCATGGCGTCCTGCCTCTCGCGAAATGGCGCTGAGGCGGAGGCGCTCCGCCTTTTC GGTGAGACGCTCGAGGAGGGTCTCCTGCCGAACGCGTTCACGCTGTGCGCCGCAACCCAG GCTTGCTTCGCCAGCGAGCTCTTCCACTTGGCTGGTGGCGCGGTTCTTGGTTTGGTATTC AAGCTGGGTTTCTGGGGCACTGACGTCTCGGTGGGTTGCGCTCTGATCGACATGTTCGCG AAGAATGGGGATTTGGTGGCGATGCGCCGGGTGTTTGATGGATTGTTCGAGAGGACGGTT GTCGTCTGGACATTGTTGATTACACGGTATGCGCAGAGTGGTTATTCTGATGAGGCTGTA GAATTGTTTCTTGACATGCTGGAGAACGGATTTCAGCCGGACCAGTACACCTTGAGCAGT ATGTTATCAGCTTGTACAGAGTTGGGATCATTCAGGTTGGGGCAGCAACTGCACTCTCTA GCGCTCAGGCTTGGACTGGAATCAGACAGTTGCGTGAGCTGTGGGCTTGTGGACATGTAT GCAAAGTCTCACAATGGACAGTCCTTGCACAATGCGAGAGAAGTCTTCAATCGGATGCCA AAGCATAATGTGATGGCGTGGACGGCACTTTTGTCAGGGTATGTGCAGCGTGGATCGCAG GACAACCAGGTTATGATACTGTTTTGCAAGATGTTAAATGAAGGCATCAGACCAAACCAT ATCACATATTCTAGTATGCTTAAGGCATGTGCAAACCTTGGTGATCAAGATTCAGGCAGG CAAATTCATACTCATTGCGTCAAATCTAACCTAGCTGACTTAAATGTTGTTGGGAATGCT TTAGTAAGCATGTATGCTGAATCTGGTTCCATAGAGGAAGCTAGACATGCGTTCGACCAG CTATATGAAAAGAACATGGTATCCTTCAGCGGCAATTTAGACGGAGATGGGAGGAGCAAC ACTTATCAAGATTATCAGATTGAAAGAATGGAGTTAGGAATCAGCACTTTCACATTTGGT AGTCTGATCAGTGCTGCCGCTAGTGTAGGGATGCTAACCAAAGGCCAGCGGCTGCATGCC CTCTCACTGAAGGCTGGATTTGGGTCAGATAGAGCCATAGGAAACTCTCTTGTATCTATG TATTCTAGGTGTGGATACCTAGTAGATGCTTGCCAAGTCTTTGATGAAATGAATGACCAT AATGTGATCTCATGGACTTCAATGATCAGTGGTTTGGCAAAACATGGGTATGCAGCAAGA GCTCTGGAATTGTTTCACGATATGATCGCAGCTGGGGTGAAACCAAATGATGTCACGTAC ATTGCTGTTTTATCTGCATGTAGCCATGCCGGTCTAGTTAAAGAAGGGAAGGAACACTTT AGAATGATGCAGAAGCATCATGGACTCATACCAAGGATGGAGCATTATGCTTGCATGGTT GATCTCCTTGGGCGATCAGGCCTTGTTGAAGATGCACTAGATTTTATCAACGAAATGCCT TGTCAAGTAGACGCATTGGTCTGGAAGACACTTCTTGGTGCCTGTAAGACCCACAACAAC ATGGATATTGGTGAGATTGCTGCTAACCATGTCATACAGCTCGAACCACAAGATCCAGCC CCCTATGTCTTGCTTTCCAACTTATACGCAGAGGCTGGTTTGTGGGATCAAGTAGCTAGG ATAAGGAGTCTAATGAGGGATAAAAACTTGATGAAAGAAAAAGGGTTGAGCTGGATGCAT GTTGACAATACCATTCACGAGTTTCGAGCTGGTGATACCAGCCATCCACAAGCAGAGGAG ATCTATACAAAGTTGGAGACACTGATAAGAGAAATCAAAGTCATGGGCTATGTACCAGAC ACCAGCGTAGTGCTCCATGACATGTCGGATGAGCTTAAGGAACTGTGTCTGCTTCAGCAC AGCGAGAAGATTGCTGTTGCATTCGGTTTGATCAGTTGTACATCAGCAACAAAGCCAATA AGGATATTTAAGAACCTCCGTGTATGCGTTGATTGTCATTCAGCACTCAAGTATGTCTCC AAGGCCACCGGTAGGGAGATAATATTGAGAGATAGCAACAGATTCCACAGGATGAAGGAT GGGGAATGCTCGTGCGGAGAATACTGGTAA

Peptide Sequence

PEP ID	Zm00001d037830_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:139004086:139006575:1 gene:Zm00001d037830 transcript:Zm00001d037830_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	MATVRSTLPPSLPPPSPSSPPAHTLAATSRHRKPLTTTAAGQAALQPSEAAALLTAAARA RDIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSW TAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVF KLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAV ELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMY AKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNH ITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQ LYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHA LSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAAR ALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMV DLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPA PYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHPQAEE IYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLISCTSATKPI RIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW

Transcript Sequence

Transcript ID	Zm00001d037830_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:139004086:139006575:1 gene:Zm00001d037830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat family protein
Sequence	ATGGCCACCGTCCGCTCCACCCTCCCACCCAGTCTCCCACCGCCATCCCCATCTTCACCT CCCGCTCACACCCTCGCGGCCACCTCCCGCCACCGCAAGCCTCTCACCACGACCGCAGCC GGGCAGGCGGCCCTCCAGCCATCCGAAGCGGCGGCGCTCCTCACGGCCGCAGCGCGCGCC CGCGACATCCACCTGGGCCGTGCACTCCAAGGCCACCTCCTCCGCACCGGGTCACTCCTC GAGACCGACGCCGTCGTCGCCAACTCGCTCCTCACGCTCTACTCCAAGTGCAGCGCCGTG GCCGCCGCGCGCAGCGTGTTCGACGGAATGCCCGTCGGCCTGCGGGACCTCGTCTCCTGG ACGGCCATGGCGTCCTGCCTCTCGCGAAATGGCGCTGAGGCGGAGGCGCTCCGCCTTTTC GGTGAGACGCTCGAGGAGGGTCTCCTGCCGAACGCGTTCACGCTGTGCGCCGCAACCCAG GCTTGCTTCGCCAGCGAGCTCTTCCACTTGGCTGGTGGCGCGGTTCTTGGTTTGGTATTC AAGCTGGGTTTCTGGGGCACTGACGTCTCGGTGGGTTGCGCTCTGATCGACATGTTCGCG AAGAATGGGGATTTGGTGGCGATGCGCCGGGTGTTTGATGGATTGTTCGAGAGGACGGTT GTCGTCTGGACATTGTTGATTACACGGTATGCGCAGAGTGGTTATTCTGATGAGGCTGTA GAATTGTTTCTTGACATGCTGGAGAACGGATTTCAGCCGGACCAGTACACCTTGAGCAGT ATGTTATCAGCTTGTACAGAGTTGGGATCATTCAGGTTGGGGCAGCAACTGCACTCTCTA GCGCTCAGGCTTGGACTGGAATCAGACAGTTGCGTGAGCTGTGGGCTTGTGGACATGTAT GCAAAGTCTCACAATGGACAGTCCTTGCACAATGCGAGAGAAGTCTTCAATCGGATGCCA AAGCATAATGTGATGGCGTGGACGGCACTTTTGTCAGGGTATGTGCAGCGTGGATCGCAG GACAACCAGGTTATGATACTGTTTTGCAAGATGTTAAATGAAGGCATCAGACCAAACCAT ATCACATATTCTAGTATGCTTAAGGCATGTGCAAACCTTGGTGATCAAGATTCAGGCAGG CAAATTCATACTCATTGCGTCAAATCTAACCTAGCTGACTTAAATGTTGTTGGGAATGCT TTAGTAAGCATGTATGCTGAATCTGGTTCCATAGAGGAAGCTAGACATGCGTTCGACCAG CTATATGAAAAGAACATGGTATCCTTCAGCGGCAATTTAGACGGAGATGGGAGGAGCAAC ACTTATCAAGATTATCAGATTGAAAGAATGGAGTTAGGAATCAGCACTTTCACATTTGGT AGTCTGATCAGTGCTGCCGCTAGTGTAGGGATGCTAACCAAAGGCCAGCGGCTGCATGCC CTCTCACTGAAGGCTGGATTTGGGTCAGATAGAGCCATAGGAAACTCTCTTGTATCTATG TATTCTAGGTGTGGATACCTAGTAGATGCTTGCCAAGTCTTTGATGAAATGAATGACCAT AATGTGATCTCATGGACTTCAATGATCAGTGGTTTGGCAAAACATGGGTATGCAGCAAGA GCTCTGGAATTGTTTCACGATATGATCGCAGCTGGGGTGAAACCAAATGATGTCACGTAC ATTGCTGTTTTATCTGCATGTAGCCATGCCGGTCTAGTTAAAGAAGGGAAGGAACACTTT AGAATGATGCAGAAGCATCATGGACTCATACCAAGGATGGAGCATTATGCTTGCATGGTT GATCTCCTTGGGCGATCAGGCCTTGTTGAAGATGCACTAGATTTTATCAACGAAATGCCT TGTCAAGTAGACGCATTGGTCTGGAAGACACTTCTTGGTGCCTGTAAGACCCACAACAAC ATGGATATTGGTGAGATTGCTGCTAACCATGTCATACAGCTCGAACCACAAGATCCAGCC CCCTATGTCTTGCTTTCCAACTTATACGCAGAGGCTGGTTTGTGGGATCAAGTAGCTAGG ATAAGGAGTCTAATGAGGGATAAAAACTTGATGAAAGAAAAAGGGTTGAGCTGGATGCAT GTTGACAATACCATTCACGAGTTTCGAGCTGGTGATACCAGCCATCCACAAGCAGAGGAG ATCTATACAAAGTTGGAGACACTGATAAGAGAAATCAAAGTCATGGGCTATGTACCAGAC ACCAGCGTAGTGCTCCATGACATGTCGGATGAGCTTAAGGAACTGTGTCTGCTTCAGCAC AGCGAGAAGATTGCTGTTGCATTCGGTTTGATCAGTTGTACATCAGCAACAAAGCCAATA AGGATATTTAAGAACCTCCGTGTATGCGTTGATTGTCATTCAGCACTCAAGTATGTCTCC AAGGCCACCGGTAGGGAGATAATATTGAGAGATAGCAACAGATTCCACAGGATGAAGGAT GGGGAATGCTCGTGCGGAGAATACTGGTAA