Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037790_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:137856386:137865363:1 gene:Zm00001d037790 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	ATGGACATGGACAGCGTGGAGTGCCTCTCCCTCCCGGACGCTGCCATGGACGTGGACGAC ATCGAAGGCCGCCCGCACCACGGCCATCTCGGCCTCCCGCTCCACCCCGCCCACCTCCCA TCCTCAGGTGCCGGCCGCGCGTTCCCCAAGGTGAATGCCGGGGGCGCCGTGGCGGGCCCG GCGGGAGCGGCGGGCACAGCAGGAGCAGGCGTGGGGCCGCCGGCGACCAGCGTGCACGAG CTGCTCGAGTGCCCCGTCTGCACCAACTCCATGTTCCCGCCAATCCATCAGTGTCAAAAT GGACATACTTTGTGTTCGACATGCAAGGCCAGGGTGCACAACAGGTGCCCTACATGCAGA CAAGAGCTTGGTGATATCAGGTGCTTAGCATTGGAAAAAGTAGCAGAGTCACTTGAGCTT CCCTGTAAGTACTGCTCTTTAGGGTGCCCAGAGATCTTCCCATACTACAGCAAGATAAAG CACGAAGCACAGTGCAGCTTCAGGCCATATACCTGCCCCTATGCTGGTTCTGAATGTGCT GTGGCTGGTGATATTCCATTCCTTGTTGCACATTTGAGGGATGATCACAAAGTCGATATG CACAGCGGCTGCACGTTCAACCATAGATATGTCAAGTCCAACCCGCGAGAGGTTGAAAAC GCCACCTGGATGCTTACGGTATTCCATTGTTTTGGGCAGTACTTCTGCCTGCACTTCGAG GCATTCCAGCTCGGAATGGCTCCAGTCTACATGGCTTTCCTCCGGTTCATGGGTGATGAG AATGATGCGAGGAACTACACATATAGCCTAGAGGTTGGTGGTAACGGGAGGAAGATGGTG TGGGAAGGTACTCCTAGAAGCATCCGTGACAGCCACCGCAAGGTCCGTGACAGCCATGAT GGCCTCATCATCCAGAGGAACATGGCGCTGTTCTTCTCGGGCGGTGACAGGAAGGAGCTG AAGCTGAGGGTGACTGGGCGGATCTGGAAGGAGCAGACCAACCCGGACGGGGCCTGCATT CCTAACCTTTGCAGCTGA

Peptide Sequence

PEP ID	Zm00001d037790_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:137856386:137865363:1 gene:Zm00001d037790 transcript:Zm00001d037790_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	MDMDSVECLSLPDAAMDVDDIEGRPHHGHLGLPLHPAHLPSSGAGRAFPKVNAGGAVAGP AGAAGTAGAGVGPPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVHNRCPTCR QELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYTCPYAGSECA VAGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFE AFQLGMAPVYMAFLRFMGDENDARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHD GLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNPDGACIPNLCS

Transcript Sequence

Transcript ID	Zm00001d037790_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:137856386:137865363:1 gene:Zm00001d037790 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SINAT4
Sequence	AATCCAAGCGAAACAAACGGCGTGACGGGAGCCAAGAGCCCGAGAGCGCCCTCCGCGGCC GCCGCACCGCGTCGTCGTTGTCCCCAGCCAACCCAACCCAGCGCAATCCCAAACGAATCC AGCCCCACCTCAGCCGCTGCGCGGACCTCCGAATCCCGGCGCCGGTGCGCGCAGGGCACC GCAGGGCGCGGCGCGGCCATGGACATGGACAGCGTGGAGTGCCTCTCCCTCCCGGACGCT GCCATGGACGTGGACGACATCGAAGGCCGCCCGCACCACGGCCATCTCGGCCTCCCGCTC CACCCCGCCCACCTCCCATCCTCAGGTGCCGGCCGCGCGTTCCCCAAGGTGAATGCCGGG GGCGCCGTGGCGGGCCCGGCGGGAGCGGCGGGCACAGCAGGAGCAGGCGTGGGGCCGCCG GCGACCAGCGTGCACGAGCTGCTCGAGTGCCCCGTCTGCACCAACTCCATGTTCCCGCCA ATCCATCAGTGTCAAAATGGACATACTTTGTGTTCGACATGCAAGGCCAGGGTGCACAAC AGGTGCCCTACATGCAGACAAGAGCTTGGTGATATCAGGTGCTTAGCATTGGAAAAAGTA GCAGAGTCACTTGAGCTTCCCTGTAAGTACTGCTCTTTAGGGTGCCCAGAGATCTTCCCA TACTACAGCAAGATAAAGCACGAAGCACAGTGCAGCTTCAGGCCATATACCTGCCCCTAT GCTGGTTCTGAATGTGCTGTGGCTGGTGATATTCCATTCCTTGTTGCACATTTGAGGGAT GATCACAAAGTCGATATGCACAGCGGCTGCACGTTCAACCATAGATATGTCAAGTCCAAC CCGCGAGAGGTTGAAAACGCCACCTGGATGCTTACGGTATTCCATTGTTTTGGGCAGTAC TTCTGCCTGCACTTCGAGGCATTCCAGCTCGGAATGGCTCCAGTCTACATGGCTTTCCTC CGGTTCATGGGTGATGAGAATGATGCGAGGAACTACACATATAGCCTAGAGGTTGGTGGT AACGGGAGGAAGATGGTGTGGGAAGGTACTCCTAGAAGCATCCGTGACAGCCACCGCAAG GTCCGTGACAGCCATGATGGCCTCATCATCCAGAGGAACATGGCGCTGTTCTTCTCGGGC GGTGACAGGAAGGAGCTGAAGCTGAGGGTGACTGGGCGGATCTGGAAGGAGCAGACCAAC CCGGACGGGGCCTGCATTCCTAACCTTTGCAGCTGAGCAAGGGAGACGTTTGGAAAGCAA AAAAGAAAGAAAATACGGTGCTGTTTGGCTGGCTTGTCTCAAAATTGCCACGTTATGCTT TCATCATAGTGTCTGCCGTTGAAATGTTGTAGTAGTAAAATCGTAGGGTGTAAAATGTTT TCTTGTAAAGTCATTGTGTATACCAACCAAATTCAAGAAAGCTTACAAGTTGGCCCATAA ATGCATGTGCTACGTTCTTGTGTAGTTTGAGTTCTGTTATCAAGGTATTGGGCTC