Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037784_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:6:137680643:137684176:1 gene:Zm00001d037784 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:salmon silks1 description: salmon silks1
Sequence	ATGCTCCACCAGATTTTGGTCATCTTCTTGCAAAAGGACAGTATCCTATGCGTTGGGATC TTGGATTCCAAAAGCAATCATACAGGGGCTATGGCGAGGCCTTACAAACCTAAGAATATC CTCATTACAGGAGCTGCTGGTTTTATCGCCTCCCATGTCGCAATCCGCATTACCAAGAAG TACCCCGATTACAAGATTATCGTCCTTGACAAACTTGACTACTGCTCTAATCTGAAGAAC CTGCTTCCTGTGAGCTCATCACCAAACTTCAAGTTTGTGAAGGGTGATATTGCAAGTGTT GATCTTGTCAACTTCCTTCTTGTCACAGAGAACATTGATACCATAATGCACTTCGCGGCC CAGACACATGTCGACAATTCATTTGGGAATTCTTTCGAATTTACCAAGAACAATATTTAT GGTACACATGTACTTCTTGAGGCCTGCAGGATTAGTGGCCAGATCAAGAGGTTCATCCAT GTCAGCACTGATGAGGTCTATGGGGAGACTGACGAGGATGCAGTTGTTGGCAACCATGAA GCATCACAGCTGCTTCCTACAAACCCATATGCAGCCACCAAAGCGGGAGCGGAGATGCTT GTAATGGCATATGGGAGATCCTATGGACTGCCAGTTATCACTACTCGGGGAAACAATGTC TATGGCCCAAATCAGTTCCCTGAGAAGCTTATCCCAAAGTTCATTCTCTTGGCCATGAGA GGGGAGCCCCTCCCTATCCATGGTGATGGAGTCAATGTCCGTAGCTACCTCTATTGTGAG GATGTTGCGGAGGCATTTGAGGTCATTCTTCATCATGGAGAAGTTGGACATGTTTATAAT ATTGGAACAAAAAGGGAGAGGACAGTGCTTGATGTGGCAAAAGATGTTTGCAGACTCTTC AATCTTGAACCTGACAAAGTCATCATGTTTGTCGAGAACAGACCTTTTAATGACCAGAGG TATTTCTTGGACGATGAGAAGCTCAAGAGCCTTGGATGGGCTGAGCGCACCCCATGGGAA GAAGGCTTAAAAAAGACAATGGAGTGGTATGTAGCAAATTCTGATTATTGGGGTGATGTT TCTGGGGCCTTACTGCCTCATCCAAGGACATTGATGATGCCAGGGTGCGAGGGGTCTGAG GAGATTAAAGGAATACTCAGCCGGTTTAATAACATTCAAACAAAGGTCGGTTCAACATCA GATAATGCTCCAGAACCGCATGCCTTCAAGTTCTTGATATATGGCAGGACAGGATGGATC GGCGGACTTCTTGGGAAAATATGTGAGAAGAAAGGAATTCCATATGAATATGGAAATGGC CGCTTGCAAGAGCGTTCTTCACTCGTCCTAGACATCCAAACTATTAAGCCAACACATGTC TTCAATGCCGCTGGTGTGACTGGAAGGCCCAATGTTGATTGGTGTGAATCGCACAAGCCG GACACCATCCGTACCAATGTTGTGGGCACCTTGAATCTAGCAGATGTATGTAGGAAGCAT GGCTTATTGATGATGAACTATGCCACTGGGTGCATATTTGAATACGATGCACATCATCCT GAAGGGTCAGGTATCGGCTTCAAAGAGGAAGATACACCAAATTTTACTGGTTCGTTCTAC TCGAAGACGAAGGCAATGGTCGAGGAGTTATTGAAGGAGTATGAGAACGTCTGCACTCTG CGAGTTCGGATGCCGATATCCTCTGACCTCAGCAACCCGCGGAACTTCGTGACAAAGATC AGCCGTTACAACAAGGTGGTGAACATCCCCAACAGCATGACGATATTGGACGAACTCCTG CCCATCTCAGTGGAGATGGCGAAGAGGAACCTGCGGGGCATCTATAACTTCACCAACCCC GGCGTCGTCAGCCACAACGAGATCCTAGAGATGTACAAGCAGTACATCGACCCTAGCTTC AAGTGGACAAACTTCACCCTCGAGGAGCAGGCGAAGGTCATCGTTGCTCCGCGAAGCAAC AACGAGATGGACGCAACCAAGCTGAAGAACGAGTTCCCCGAGCTGCTGTCGATCAAGGAC TCGTTGATCAAGTACGTCTTTGAGCCCAACAGAAAGGTGCCCACAGACTGA

Peptide Sequence

PEP ID	Zm00001d037784_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:6:137680643:137684176:1 gene:Zm00001d037784 transcript:Zm00001d037784_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:salmon silks1 description: salmon silks1
Sequence	MLHQILVIFLQKDSILCVGILDSKSNHTGAMARPYKPKNILITGAAGFIASHVAIRITKK YPDYKIIVLDKLDYCSNLKNLLPVSSSPNFKFVKGDIASVDLVNFLLVTENIDTIMHFAA QTHVDNSFGNSFEFTKNNIYGTHVLLEACRISGQIKRFIHVSTDEVYGETDEDAVVGNHE ASQLLPTNPYAATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMR GEPLPIHGDGVNVRSYLYCEDVAEAFEVILHHGEVGHVYNIGTKRERTVLDVAKDVCRLF NLEPDKVIMFVENRPFNDQRYFLDDEKLKSLGWAERTPWEEGLKKTMEWYVANSDYWGDV SGALLPHPRTLMMPGCEGSEEIKGILSRFNNIQTKVGSTSDNAPEPHAFKFLIYGRTGWI GGLLGKICEKKGIPYEYGNGRLQERSSLVLDIQTIKPTHVFNAAGVTGRPNVDWCESHKP DTIRTNVVGTLNLADVCRKHGLLMMNYATGCIFEYDAHHPEGSGIGFKEEDTPNFTGSFY SKTKAMVEELLKEYENVCTLRVRMPISSDLSNPRNFVTKISRYNKVVNIPNSMTILDELL PISVEMAKRNLRGIYNFTNPGVVSHNEILEMYKQYIDPSFKWTNFTLEEQAKVIVAPRSN NEMDATKLKNEFPELLSIKDSLIKYVFEPNRKVPTD

Transcript Sequence

Transcript ID	Zm00001d037784_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:137680643:137684176:1 gene:Zm00001d037784 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:salmon silks1 description: salmon silks1
Sequence	GCGGAACTTTGCCGCCCAGCCTCCTGCATTGCGTATTTGCATGCTTGGTGTTCGCTTGTT TGTCTGGCACCAGATCGGGTCTGAAGGCGAGAACGCCAGACGGCCAGATAATATTGTCCT TGTGATGTTTCTCATTTCATTACCGTCCCCGGGTGATCCGAAATGAAAAAAAATATACAT TATGCTCCACCAGATTTTGGTCATCTTCTTGCAAAAGGACAGTATCCTATGCGTTGGGAT CTTGGATTCCAAAAGCAATCATACAGGGGCTATGGCGAGGCCTTACAAACCTAAGAATAT CCTCATTACAGGAGCTGCTGGTTTTATCGCCTCCCATGTCGCAATCCGCATTACCAAGAA GTACCCCGATTACAAGATTATCGTCCTTGACAAACTTGACTACTGCTCTAATCTGAAGAA CCTGCTTCCTGTGAGCTCATCACCAAACTTCAAGTTTGTGAAGGGTGATATTGCAAGTGT TGATCTTGTCAACTTCCTTCTTGTCACAGAGAACATTGATACCATAATGCACTTCGCGGC CCAGACACATGTCGACAATTCATTTGGGAATTCTTTCGAATTTACCAAGAACAATATTTA TGGTACACATGTACTTCTTGAGGCCTGCAGGATTAGTGGCCAGATCAAGAGGTTCATCCA TGTCAGCACTGATGAGGTCTATGGGGAGACTGACGAGGATGCAGTTGTTGGCAACCATGA AGCATCACAGCTGCTTCCTACAAACCCATATGCAGCCACCAAAGCGGGAGCGGAGATGCT TGTAATGGCATATGGGAGATCCTATGGACTGCCAGTTATCACTACTCGGGGAAACAATGT CTATGGCCCAAATCAGTTCCCTGAGAAGCTTATCCCAAAGTTCATTCTCTTGGCCATGAG AGGGGAGCCCCTCCCTATCCATGGTGATGGAGTCAATGTCCGTAGCTACCTCTATTGTGA GGATGTTGCGGAGGCATTTGAGGTCATTCTTCATCATGGAGAAGTTGGACATGTTTATAA TATTGGAACAAAAAGGGAGAGGACAGTGCTTGATGTGGCAAAAGATGTTTGCAGACTCTT CAATCTTGAACCTGACAAAGTCATCATGTTTGTCGAGAACAGACCTTTTAATGACCAGAG GTATTTCTTGGACGATGAGAAGCTCAAGAGCCTTGGATGGGCTGAGCGCACCCCATGGGA AGAAGGCTTAAAAAAGACAATGGAGTGGTATGTAGCAAATTCTGATTATTGGGGTGATGT TTCTGGGGCCTTACTGCCTCATCCAAGGACATTGATGATGCCAGGGTGCGAGGGGTCTGA GGAGATTAAAGGAATACTCAGCCGGTTTAATAACATTCAAACAAAGGTCGGTTCAACATC AGATAATGCTCCAGAACCGCATGCCTTCAAGTTCTTGATATATGGCAGGACAGGATGGAT CGGCGGACTTCTTGGGAAAATATGTGAGAAGAAAGGAATTCCATATGAATATGGAAATGG CCGCTTGCAAGAGCGTTCTTCACTCGTCCTAGACATCCAAACTATTAAGCCAACACATGT CTTCAATGCCGCTGGTGTGACTGGAAGGCCCAATGTTGATTGGTGTGAATCGCACAAGCC GGACACCATCCGTACCAATGTTGTGGGCACCTTGAATCTAGCAGATGTATGTAGGAAGCA TGGCTTATTGATGATGAACTATGCCACTGGGTGCATATTTGAATACGATGCACATCATCC TGAAGGGTCAGGTATCGGCTTCAAAGAGGAAGATACACCAAATTTTACTGGTTCGTTCTA CTCGAAGACGAAGGCAATGGTCGAGGAGTTATTGAAGGAGTATGAGAACGTCTGCACTCT GCGAGTTCGGATGCCGATATCCTCTGACCTCAGCAACCCGCGGAACTTCGTGACAAAGAT CAGCCGTTACAACAAGGTGGTGAACATCCCCAACAGCATGACGATATTGGACGAACTCCT GCCCATCTCAGTGGAGATGGCGAAGAGGAACCTGCGGGGCATCTATAACTTCACCAACCC CGGCGTCGTCAGCCACAACGAGATCCTAGAGATGTACAAGCAGTACATCGACCCTAGCTT CAAGTGGACAAACTTCACCCTCGAGGAGCAGGCGAAGGTCATCGTTGCTCCGCGAAGCAA CAACGAGATGGACGCAACCAAGCTGAAGAACGAGTTCCCCGAGCTGCTGTCGATCAAGGA CTCGTTGATCAAGTACGTCTTTGAGCCCAACAGAAAGGTGCCCACAGACTGAAGCCCGAA GGGCTGGCACAGCTGATACCGTACAACACAGCAACCATTAGTGTTAGACTATGTGTGTGG GCCAGCACTACTTTACTTTTGGGCTGTCGGTCTATTAGGGTTAGAGTCCTGTGAGTCTAT ATATTGTACCTCATCTCTTATACAATACATTTTTGGGCTGTGAGTCTATATATTGTCGAA CAGCAGAGGAGGTCGAGGGCGGGGCTGTCCGCCCAGATCCACACCGCCGCCGCTTCTAGG GCAGGTCGTCGTGACCTGGACCTCCCCCGCACGGACATCGCTGCGGCCGCTGGACGCGGC CACTAAGTGTGTTTGGTTTGATGTCAAAGTAGGATGAGTCGGGGGCGCTATCGTCCCCTC GATTTTTTGGGATCATGCCGCCC