Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037772_T015
CDS Infomation

cds chromosome:B73_RefGen_v4:6:137007431:137027131:1 gene:Zm00001d037772 gene_biotype:protein_coding transcript_biotype:protein_coding description:catalytics
Sequence

ATGGAGGATCATTCACTCTTGTTAATTCAACAAGGTGAGGTTGTTTGGAGCAGAGAGGAT
GGGCTGGCTTCAATTGTTGATGTAACAACATCAGAATTGCCTGTTGAGAAGGATGGTGTA
TCAGTTGCCGATGTGGAACACAATCTCTTTGAGTGGCTTAAGGGACACATGCTGAAACTC
AAAGGAAGTCTAATGCTTGCTAATGCTGATGAAGTTGCTGCAATCCAAGCAATGAGACTA
AAAAGCTCTGAGAAAAATAAGATGACAAGAGACCATAATGGATTTCGCAAACTCCTTGTT
GTATTGACAAAAGCGGGCAAAGTGATGGCTCTGCACACTGGAGATGGACGTGTTATCTGG
TCGAAATTGGTGCCATCTCTTCGTGCCTCCAGATGTGGTGGAGTCCCTTCTGCATTAAGG
ATATACCAATGGCAGGTCCCGCATCACAGTGTCATGCGTGAAAATCCATCTGTACTTGTT
GTTGGCAAATTTGGAGCAGAACCTTCAATTCCTGGTGTATTCTCTATTCTTGATTCATAT
TCTGGAGAAGAACTGAACTCTATGAAACTTGACCATTCTGTTGTCCAAATTATTCCCTTG
ACACTGAAGGATTCATCAGAGCAACAACTTCATCTGTTTGTTGATTCCGATTCCAATGCA
CATTTATATCCGAAATCTCCAGATGCTCTCAATGTATTTCTTCATGAAATGTCAAACCTG
TATTTCTACTCTGTAGATATTCAGGCAAATGTTATTAAAGGGTATTCATTACAGAAGTCA
TGTAATCTCAATGTGGGTGATGAGTACTGCTTTAGTACGAAGGAGTTATGGTTCATCATC
TTTCCTTCTGATTCTGAAAGGATTACTATCTCTGAAACACGAAAGATGAATGAGGTTGTT
CATACCCAAGCTAAGATAAGCGGTGACCATGATGTGATGTACAAGTACTTGTCAAAGAAT
TTAGTTTTTGTTGCTACTTTGTCTCCTAAAGCTGCTGTTGATATTGGATCTGCACTACCT
GAAGAAGCTTCACTTGTTGCATATCTTATTGATGCAGTCACTGGACGCATACTCCATCGT
GTGACTCATCATGGTGCACAAGGCCCTGTACATGCAGTTTTGAGCGAGAACTGGGTTGTC
TATCATTATTTTAATCTTCGAGCTCACAGATTTGAAATGGCGGTGATCGAGATATATGAT
CAATCTAGGGCGGTATGGCTTATGCTGTCTTAA

Peptide Sequence

PEP ID

Zm00001d037772_P015
PEP Infomation

pep chromosome:B73_RefGen_v4:6:137007431:137027131:1 gene:Zm00001d037772 transcript:Zm00001d037772_T015 gene_biotype:protein_coding transcript_biotype:protein_coding description:catalytics
Sequence

MEDHSLLLIQQGEVVWSREDGLASIVDVTTSELPVEKDGVSVADVEHNLFEWLKGHMLKL
KGSLMLANADEVAAIQAMRLKSSEKNKMTRDHNGFRKLLVVLTKAGKVMALHTGDGRVIW
SKLVPSLRASRCGGVPSALRIYQWQVPHHSVMRENPSVLVVGKFGAEPSIPGVFSILDSY
SGEELNSMKLDHSVVQIIPLTLKDSSEQQLHLFVDSDSNAHLYPKSPDALNVFLHEMSNL
YFYSVDIQANVIKGYSLQKSCNLNVGDEYCFSTKELWFIIFPSDSERITISETRKMNEVV
HTQAKISGDHDVMYKYLSKNLVFVATLSPKAAVDIGSALPEEASLVAYLIDAVTGRILHR
VTHHGAQGPVHAVLSENWVVYHYFNLRAHRFEMAVIEIYDQSRAVWLMLS

Transcript Sequence

Transcript ID

Zm00001d037772_T015
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:137007431:137027131:1 gene:Zm00001d037772 gene_biotype:protein_coding transcript_biotype:protein_coding description:catalytics
Sequence

CTCCTAAAGCTCAAAGGTACTGATGGATTGGAAGTACTTCAGAGATTTGACCAGCCAGCT
GCTGTCAGTGATTCCCTGACAATCACAGAAAAAGAAGCAGCTTTTGCTGTCGTGCAACAT
TTGGGTTCTGAAATTGAGTTTATCGTAAAATCTACAAGTGATCTAAGCAGTGAAATTATT
AAAGAAAAGCTTGTTATAGACCAAAATAGGGGCAATGTTGAGAAGGTCTTCTTGAATAGT
TATATTCGAACCGACAGATCTCATGGTTTTCGAGCTTTGGTTGTAATGGAGGATCATTCA
CTCTTGTTAATTCAACAAGGTGAGGTTGTTTGGAGCAGAGAGGATGGGCTGGCTTCAATT
GTTGATGTAACAACATCAGAATTGCCTGTTGAGAAGGATGGTGTATCAGTTGCCGATGTG
GAACACAATCTCTTTGAGTGGCTTAAGGGACACATGCTGAAACTCAAAGGAAGTCTAATG
CTTGCTAATGCTGATGAAGTTGCTGCAATCCAAGCAATGAGACTAAAAAGCTCTGAGAAA
AATAAGATGACAAGAGACCATAATGGATTTCGCAAACTCCTTGTTGTATTGACAAAAGCG
GGCAAAGTGATGGCTCTGCACACTGGAGATGGACGTGTTATCTGGTCGAAATTGGTGCCA
TCTCTTCGTGCCTCCAGATGTGGTGGAGTCCCTTCTGCATTAAGGATATACCAATGGCAG
GTCCCGCATCACAGTGTCATGCGTGAAAATCCATCTGTACTTGTTGTTGGCAAATTTGGA
GCAGAACCTTCAATTCCTGGTGTATTCTCTATTCTTGATTCATATTCTGGAGAAGAACTG
AACTCTATGAAACTTGACCATTCTGTTGTCCAAATTATTCCCTTGACACTGAAGGATTCA
TCAGAGCAACAACTTCATCTGTTTGTTGATTCCGATTCCAATGCACATTTATATCCGAAA
TCTCCAGATGCTCTCAATGTATTTCTTCATGAAATGTCAAACCTGTATTTCTACTCTGTA
GATATTCAGGCAAATGTTATTAAAGGGTATTCATTACAGAAGTCATGTAATCTCAATGTG
GGTGATGAGTACTGCTTTAGTACGAAGGAGTTATGGTTCATCATCTTTCCTTCTGATTCT
GAAAGGATTACTATCTCTGAAACACGAAAGATGAATGAGGTTGTTCATACCCAAGCTAAG
ATAAGCGGTGACCATGATGTGATGTACAAGTACTTGTCAAAGAATTTAGTTTTTGTTGCT
ACTTTGTCTCCTAAAGCTGCTGTTGATATTGGATCTGCACTACCTGAAGAAGCTTCACTT
GTTGCATATCTTATTGATGCAGTCACTGGACGCATACTCCATCGTGTGACTCATCATGGT
GCACAAGGCCCTGTACATGCAGTTTTGAGCGAGAACTGGGTTGTCTATCATTATTTTAAT
CTTCGAGCTCACAGATTTGAAATGGCGGTGATCGAGATATATGATCAATCTAGGGCGGTA
TGGCTTATGCTGTCTTAATTATGCACACTTGTTTTTTGTTATGATGGTGGTAGTAATATT
AAGTGCACTATGTAGGGCAATAAAGATGTCACGAAGCTCATACTAGGGAAGCATAATCTT
TTGGCACCAATTACATCTTATGCCCGCCCTGAGGTGGCAGTAAAATCCCAGTCATACTTT
TTCACCCATTCAGTAAAAGCAATGGCAGTTACACAAACGGCTAAGGGGATCACTTCCAAG
CAGCTTCTGTTGGGTACTATTGGTGACCAGGTCTGTTGTATTTATTTCTTGAATGTAGAC
ATAAAAATAAAGAGCTAAAACGATTACTATTTTTGGACGGGGGAGTATTACTGTAGGCTT
GAAATTCTTAGGAATTTCCTAGTCTACTGTTCCATGACAATACAATCAGCATTTTAACAT
GTCTATACAGCTCGACCTTAAGTTCTCATTCAGTGGCACTAGAATATAATTTATTCTCCC
CAGTTCTGTAAGGTTGAACCTTTTTCCAAACTGCTGCTGCTTAGCTGGATTTAGAATTTT
AGATCAACATATCTGAATGCTAACACAAATGCATTAGTGAAATGGATATTTTGCTGTTGA
CAACTTGCGTGGTGATTATGTACTGAGTACCATTCGTACAACCTGGAGGTAGCACTGACA
TGGGAATCAGGATTGGTTCCAACATAGCTCCACTTCTTTGGTCAATCTTATTATCAGTTG
ACCATAGATTTAAAATGTAAGGGGACCTGTCACCTGTGCATCATAGGTCAAGCCATTTAA
AACCAGTGGGGCCTGTTTGTGTCACAAACATTATATTGTATATAATTGGGCTGCACTGTT
TTAGATTAATTGATTAATTAATGTGGAGGGCTAATTGTCATTTATATGGGTAAAATAATT
CTAGTTTGACATTCTTCTCAAACATATGGCAGGTTTTGGCACTTGATAAGCGCTATCTTG
ATCCACGCCGTTCAGTGAACCCGACACAGCAAGAAAAAGAAGAGGGCATTATACCATTAA
CAGATTCTTTGCCTATAATACCCCAGTCCTTTGTGACGCACTCTCATCAAGTGGAGGCCC
TGCGAGCCATTGTTTCTATTCCTGCAAAGTTGGAGTCCACTATTGTTTTCACATATGGTG
TCGATCTATTCTACACCCAGCTTGCCCCGTCAAGAACCTATGATTCCCTAACCGACGAAT
TCAGCTATGCGCTGCTTCTAATCACGATCGCAGTCCTGGTTGCCGCCATTATTGGTACAT
GGATTTGGTCTGAGAAAAAGGAGTTGAGAGACAAGTGGAGGTGAGCAAGGTCTCAGTGTT
CTGACGCTGAGGAAATTTTGGGCCCTAGTCAGCTACCTTCTCCTCCTCTCCCCTTTTCAT
TGTAGTGCTAGAGTTCGTTTCACTTTTTGACTAGGACTTTATTTATGTAACCGTTTGACA
ACAAAGCCTATCTGCCGTGAATTGTCACACTGCGGAGGCCTTATAGAAAGCCACTTACGC
AATTAAAGATTCAGGAAATGACATCGAAGGGTTAGCAGAGCGCAGATGGCGTGA