Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037771_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:136915388:136922617:-1 gene:Zm00001d037771 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH133
Sequence

ATGAACAGAGGAGAATTCCAGACCTCCCTTGTCCAGCAGATGATCTGGAGCGGCGGCGGC
GGCGGCAATACCACAGCGGCAGGCAGCAGCAACATCATGAGCAGCGGCTTCAAGCAGTCT
TGCCATGAGGATCAACAAGAGGCCTCCCGCAACCTGCAGCTGCTGCCCTCCCTATCGTCT
CCGTCGTCGCTGCTCTTCTCCAATGCCCAGCAGTTCCCGCACACCACCTCTTCGGGCCAG
CAGCTAGCCCACACCAACGCCGGCGGCGCAGCAGCTGGTTCTCTCCCAAGTCTGGACGAC
GACGGCGGCAGCGGTCAGGACAGCCACATGCCGGAATCGTGGAGCCAGATGCTTCTAGGG
GAGTTCGCTGGAGAGCGCTACGCCGCCACCGCATGTCTGCTGTCAAAGGGCGTAGAGGAC
TGGGGGGATCACGCTGCGGCAGCTGCAAGCGCGTGCATGGTGGGTGGCGGCGGCGGCGTG
GAGGAGGAGGGCTCGGCCGCCATGCCTCTGTACAGCTTATATGGTGGTGGTAGTCACAGT
CACAGCCACCTCGCTGCAGCTGGTGACCATGAGATGCCGCCGGCGCCAGCAGCAGCAGCA
GCAGGGGCCAATAAGTCTCAGCTGAGCCAGATGCTCCTCGCCTCGTCGCCTAGGTCCTGC
GTCACCACCAGCCTCGGCAGCAACATGCTCGACTTCTCCAACAACGGCGTGCCCCCGGCG
CCCGATCAGCTGAAGAGCCACCACCACCATCAATCCGATAACTCATCCGAGTGCAACAGC
ACCGTAACAGGTTCGGCCATCAAGAAGCCTAGGGTTCAGGCCTCCTCTTCAGCACAATCT
ACTCTAAAGGTGAGGAAGGAGAGACTGGGTGACAGAATAACTGCCCTACACCAGATCGTT
TCTCCGTTTGGCAAGACTGACACGGCGTCCGTCCTGCAAGAGACCATTGGCTATATCAGA
TTCCTACTGGGACAAATTGAGGCTCTCAGCTACCCCTACATGGGCCACGGCAATGGGACC
TCCATTCAAAATGGACCAACAACTGGAGAAAGGAACCATGCAGGGCTCCTACCAGATCAA
TACCCCGGCCAGTTGCTGAACCATAATAACAACACTGGAGCACGGCAGCCTGCAGCAGTC
GGCCAGCCTGATGAGCAGCAGCAGCAGCAGGGTGGTGCTAATAATAATGACGAGACGAAG
AAGGACCTGAGGAGCCGGGGGCTGTGCCTCGTCCCGGTGTCATGCACGTCGCACTTCGGA
GGGGACAACGCCGCTGACTACTGGGCTCCGGCGCCGCTCGGTGGGATCCTCCGCTAG

Peptide Sequence

PEP ID

Zm00001d037771_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:136915388:136922617:-1 gene:Zm00001d037771 transcript:Zm00001d037771_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH133
Sequence

MNRGEFQTSLVQQMIWSGGGGGNTTAAGSSNIMSSGFKQSCHEDQQEASRNLQLLPSLSS
PSSLLFSNAQQFPHTTSSGQQLAHTNAGGAAAGSLPSLDDDGGSGQDSHMPESWSQMLLG
EFAGERYAATACLLSKGVEDWGDHAAAAASACMVGGGGGVEEEGSAAMPLYSLYGGGSHS
HSHLAAAGDHEMPPAPAAAAAGANKSQLSQMLLASSPRSCVTTSLGSNMLDFSNNGVPPA
PDQLKSHHHHQSDNSSECNSTVTGSAIKKPRVQASSSAQSTLKVRKERLGDRITALHQIV
SPFGKTDTASVLQETIGYIRFLLGQIEALSYPYMGHGNGTSIQNGPTTGERNHAGLLPDQ
YPGQLLNHNNNTGARQPAAVGQPDEQQQQQGGANNNDETKKDLRSRGLCLVPVSCTSHFG
GDNAADYWAPAPLGGILR

Transcript Sequence

Transcript ID

Zm00001d037771_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:136915388:136922617:-1 gene:Zm00001d037771 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription factor bHLH133
Sequence

ACCTCTTCTTCTTCTGCTGGTATCTATCGTTGTTGTTCCCTTCGTTCTCTCTCCATCTAT
CTCCCTCAGATTACTTGCGACCAGCGACGCTCTGGCTGGCCCCTTTGAGATTGACCTGGG
GCTTCCATACACCAAGAGTGCAGCAAGAGGATAGATAGCATTTGTTGCAGCGCTCTCTAG
GTCGTCTCTCTCTCTCTCTAGCTAGCTAGCGTCGTCTCCTCCGGTGAGGTGATGAACAGA
GGAGAATTCCAGACCTCCCTTGTCCAGCAGATGATCTGGAGCGGCGGCGGCGGCGGCAAT
ACCACAGCGGCAGGCAGCAGCAACATCATGAGCAGCGGCTTCAAGCAGTCTTGCCATGAG
GATCAACAAGAGGCCTCCCGCAACCTGCAGCTGCTGCCCTCCCTATCGTCTCCGTCGTCG
CTGCTCTTCTCCAATGCCCAGCAGTTCCCGCACACCACCTCTTCGGGCCAGCAGCTAGCC
CACACCAACGCCGGCGGCGCAGCAGCTGGTTCTCTCCCAAGTCTGGACGACGACGGCGGC
AGCGGTCAGGACAGCCACATGCCGGAATCGTGGAGCCAGATGCTTCTAGGGGAGTTCGCT
GGAGAGCGCTACGCCGCCACCGCATGTCTGCTGTCAAAGGGCGTAGAGGACTGGGGGGAT
CACGCTGCGGCAGCTGCAAGCGCGTGCATGGTGGGTGGCGGCGGCGGCGTGGAGGAGGAG
GGCTCGGCCGCCATGCCTCTGTACAGCTTATATGGTGGTGGTAGTCACAGTCACAGCCAC
CTCGCTGCAGCTGGTGACCATGAGATGCCGCCGGCGCCAGCAGCAGCAGCAGCAGGGGCC
AATAAGTCTCAGCTGAGCCAGATGCTCCTCGCCTCGTCGCCTAGGTCCTGCGTCACCACC
AGCCTCGGCAGCAACATGCTCGACTTCTCCAACAACGGCGTGCCCCCGGCGCCCGATCAG
CTGAAGAGCCACCACCACCATCAATCCGATAACTCATCCGAGTGCAACAGCACCGTAACA
GGTTCGGCCATCAAGAAGCCTAGGGTTCAGGCCTCCTCTTCAGCACAATCTACTCTAAAG
GTGAGGAAGGAGAGACTGGGTGACAGAATAACTGCCCTACACCAGATCGTTTCTCCGTTT
GGCAAGACTGACACGGCGTCCGTCCTGCAAGAGACCATTGGCTATATCAGATTCCTACTG
GGACAAATTGAGGCTCTCAGCTACCCCTACATGGGCCACGGCAATGGGACCTCCATTCAA
AATGGACCAACAACTGGAGAAAGGAACCATGCAGGGCTCCTACCAGATCAATACCCCGGC
CAGTTGCTGAACCATAATAACAACACTGGAGCACGGCAGCCTGCAGCAGTCGGCCAGCCT
GATGAGCAGCAGCAGCAGCAGGGTGGTGCTAATAATAATGACGAGACGAAGAAGGACCTG
AGGAGCCGGGGGCTGTGCCTCGTCCCGGTGTCATGCACGTCGCACTTCGGAGGGGACAAC
GCCGCTGACTACTGGGCTCCGGCGCCGCTCGGTGGGATCCTCCGCTAGAGCGAGCGCGCC
ATTGAAGCATGCATATGCGTTTTCTCGTTTAGATGTGGCGAGCTAGCTGCTGTTCGTTCC
GTACAAGTATATGTTCGTCAGGCTGCTGCAGGGTGGCGTGCATGCATATATATGCTGCTG
GTTGCTGTGGGAAACATACCATCATGAGCAGTCATTCTTGGTAGGGGAGAAGCTGCGTGC
GTCGTATACCTGTAAGGCTGATTGCTCTTGATGCTATGCGAGTAAGTATGACGACCCTTT
TTGTGGGCGCGCAAGGCTTCATTAA