Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037693_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:134213715:134216890:1 gene:Zm00001d037693 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malic enzyme

Sequence

ATGCAGAACCTGCGCCGGTACGAGCAGCCGCTGCACCGCTACATCGCCATGATGGACCTG
CAGGAGCGCAACGAGAGGCTCTTCTACAAGCTCCTCATCGACAACGTCGAGGAGCTGCTC
CCCGTCGTCTACACGCCCACCGTCGGCGAGGCATGCCAGAAGTACGGCAGCATCTACCGC
CGCCCGCAGGGGCTGTACATCAGCCTCAGGGACAAGGGCAAGATCCTCGAGGTGCTCAAG
AACTGGCCCGAGAGGAGCATCCAGGTCATCGTCGTCACCGACGGCGAGCGCATCCTCGGC
CTCGGTGATCTCGGTTGCCAGGGGATGGGAATTCCCGTTGGCAAGCTCTCCCTCTACACT
GCCCTCGGAGGTGTTCGCCCGTCAGCTTGCCTGCCCATCACAATTGATGTCGGCACCAAC
AACGAGGCCTTGCTCAAGGACGAGTTCTACATCGGCCTCCGCCAGAGGCGTGCCACCGGC
GAGGAGTACCATGAACTTCTTGAAGAGTTCATGACCGCCGTCAAGCAAAACTACGGCGAG
AAGGTCCTCACCCAGTTCGAAGACTTCGCCAACCACAACGCCTTTGACCTGCTCGAGAAG
TACAGGGAGAGCCATCTCGTCTTCAACGACGATATCCAGGGAACAGCATCCGTGGTCCTC
GCTGGCCTCCTGGCGGCGCTCAAGGTGGTCGGCGGGACACTGGCGGACCACACTTACCTG
TTCCTCGGCGCCGGCGAGGCCGGGACTGGCATTGCCGAGCTCATTGCTCTCGAGATGTCC
AAACATACTGGGTCTCCGATCGAAGAGTGCCGCCCGAAGATCTGGCTGATGGACTCCAAG
GGCCTGATCGTGGCGTCACGGAAGGACTCGCTGCAGGCGTTCAAGAAGCCATGGGCGCAC
GAGCACGAGCCCGTGGCGACCCTGCTGGAGGCCGTGCAGTCCCTGAAGCCGACGGTGCTG
ATCGGCACCTCGGGCAAGGGCGGCACCTTCACCAAGGAGGTGGTGGAGGCGATGGCGTCC
CAGAACGAGAAGCCGGTCATCTTCGCGCTGTCGAACCCGACCTCGCACTCGGAGTGCACG
GCGGAGCAGGCCTACACCTGGACCAAGGGCCGCGCGGTGTTCGCGAGCGGCAGCCCCTTC
GACAGCGTGGAGCTGGACGGCAAGGTGCTGGTGCCGGGGCAGTCCAACAACGCCTACATC
TTCCCGGGGTTCGGCCTCGGCGTCGTCATCTCCGGCGCCATCCGCGTCCGCGACGACATG
CTGCTGGCCGCCTCGGAGGCGCTGGCGGAGCAGGTAACCGAGGAGCACTTCGCCAAGGGG
CTCATCTTCCCGCCCTTCACCAACATCCGCGCCATCTCCGCGCGCATCGCCGCCAAGGTG
GCTGCCAAGGCCTACGAGCTCGGCCTCGCCAGCCGCCTGCCACGCCCTGACGATCTCGTC
AAGTACGCTGAGAGCTGCATGTACACCCCCATCTACCGCAGCTACCGGTAA

Peptide Sequence

PEP ID

Zm00001d037693_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:134213715:134216890:1 gene:Zm00001d037693 transcript:Zm00001d037693_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malic enzyme

Sequence

MQNLRRYEQPLHRYIAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYR
RPQGLYISLRDKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYT
ALGGVRPSACLPITIDVGTNNEALLKDEFYIGLRQRRATGEEYHELLEEFMTAVKQNYGE
KVLTQFEDFANHNAFDLLEKYRESHLVFNDDIQGTASVVLAGLLAALKVVGGTLADHTYL
FLGAGEAGTGIAELIALEMSKHTGSPIEECRPKIWLMDSKGLIVASRKDSLQAFKKPWAH
EHEPVATLLEAVQSLKPTVLIGTSGKGGTFTKEVVEAMASQNEKPVIFALSNPTSHSECT
AEQAYTWTKGRAVFASGSPFDSVELDGKVLVPGQSNNAYIFPGFGLGVVISGAIRVRDDM
LLAASEALAEQVTEEHFAKGLIFPPFTNIRAISARIAAKVAAKAYELGLASRLPRPDDLV
KYAESCMYTPIYRSYR

Transcript Sequence

Transcript ID

Zm00001d037693_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:134213715:134216890:1 gene:Zm00001d037693 gene_biotype:protein_coding transcript_biotype:protein_coding description:Malic enzyme

Sequence

CGTGGGCCTTCTCCGTCGCAAGCGGCTACACCCTGCTGCGCGACCCGCGGCACAACAAGG
GCCTGGCCTTCTCGGAGGCGGAGCGCGACGCGCACTACCTCCGGGGCCTGCTGCCGCCGG
CGCTGGCGTCGCAGGAGCTGCAGGAGAAGAAGCTCATGCAGAACCTGCGCCGGTACGAGC
AGCCGCTGCACCGCTACATCGCCATGATGGACCTGCAGGAGCGCAACGAGAGGCTCTTCT
ACAAGCTCCTCATCGACAACGTCGAGGAGCTGCTCCCCGTCGTCTACACGCCCACCGTCG
GCGAGGCATGCCAGAAGTACGGCAGCATCTACCGCCGCCCGCAGGGGCTGTACATCAGCC
TCAGGGACAAGGGCAAGATCCTCGAGGTGCTCAAGAACTGGCCCGAGAGGAGCATCCAGG
TCATCGTCGTCACCGACGGCGAGCGCATCCTCGGCCTCGGTGATCTCGGTTGCCAGGGGA
TGGGAATTCCCGTTGGCAAGCTCTCCCTCTACACTGCCCTCGGAGGTGTTCGCCCGTCAG
CTTGCCTGCCCATCACAATTGATGTCGGCACCAACAACGAGGCCTTGCTCAAGGACGAGT
TCTACATCGGCCTCCGCCAGAGGCGTGCCACCGGCGAGGAGTACCATGAACTTCTTGAAG
AGTTCATGACCGCCGTCAAGCAAAACTACGGCGAGAAGGTCCTCACCCAGTTCGAAGACT
TCGCCAACCACAACGCCTTTGACCTGCTCGAGAAGTACAGGGAGAGCCATCTCGTCTTCA
ACGACGATATCCAGGGAACAGCATCCGTGGTCCTCGCTGGCCTCCTGGCGGCGCTCAAGG
TGGTCGGCGGGACACTGGCGGACCACACTTACCTGTTCCTCGGCGCCGGCGAGGCCGGGA
CTGGCATTGCCGAGCTCATTGCTCTCGAGATGTCCAAACATACTGGGTCTCCGATCGAAG
AGTGCCGCCCGAAGATCTGGCTGATGGACTCCAAGGGCCTGATCGTGGCGTCACGGAAGG
ACTCGCTGCAGGCGTTCAAGAAGCCATGGGCGCACGAGCACGAGCCCGTGGCGACCCTGC
TGGAGGCCGTGCAGTCCCTGAAGCCGACGGTGCTGATCGGCACCTCGGGCAAGGGCGGCA
CCTTCACCAAGGAGGTGGTGGAGGCGATGGCGTCCCAGAACGAGAAGCCGGTCATCTTCG
CGCTGTCGAACCCGACCTCGCACTCGGAGTGCACGGCGGAGCAGGCCTACACCTGGACCA
AGGGCCGCGCGGTGTTCGCGAGCGGCAGCCCCTTCGACAGCGTGGAGCTGGACGGCAAGG
TGCTGGTGCCGGGGCAGTCCAACAACGCCTACATCTTCCCGGGGTTCGGCCTCGGCGTCG
TCATCTCCGGCGCCATCCGCGTCCGCGACGACATGCTGCTGGCCGCCTCGGAGGCGCTGG
CGGAGCAGGTAACCGAGGAGCACTTCGCCAAGGGGCTCATCTTCCCGCCCTTCACCAACA
TCCGCGCCATCTCCGCGCGCATCGCCGCCAAGGTGGCTGCCAAGGCCTACGAGCTCGGCC
TCGCCAGCCGCCTGCCACGCCCTGACGATCTCGTCAAGTACGCTGAGAGCTGCATGTACA
CCCCCATCTACCGCAGCTACCGGTAAGGAAAGGACCATGGCCGGGGCGGCGGCCTGAGCC
TAGAGGAGTGAGTTTACACATACTTTCATTTCTATACACTGTATTTCTGTGTACCGTATA
CGGCATACCATACAACACTACTACATA