Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037651_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:133037591:133043190:1 gene:Zm00001d037651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like serine endopeptidase family protein
Sequence

ATGGCGCCCAAGCTTCCTGTGCTACGACGAGCAAGGTCGCTGCCGCTGCTTTTTCTTGCC
AACTTTGTTGTGCTGCAGTTACAATGCTCCTATGGGCTTCCGCTCCAGAATGAACCGAGA
CAAATATACATCATCTACCTTGGTGGGCGACAAAGTGACGATGCTGATCTTGTCACTGCT
TCCCACCATGATCTCCTTGCGTCTGTTGTCGGCAGCAAGCAAGAAGCGGTAGAGTCGATT
ATCTACAGCTATAGACATGGATTCTCCGGCTTCGCTGCTTTGCTCACGAAATCACAGTCT
ACAAAGATTGCAGGTCTGCCTGGCGTAGTTAGTGTAACGAAAAACCGAGTCCACCACACA
CGCACAACTCGAAGCTGGGACTTTGTGGGGCTGCACTACAACGACGATCAGCCAAACGGT
TTGCTCGCAAAGGCGGCTAAATACGGAGACGACGTCATTGTCGGCGTCATCGACTCAGGC
TTCTGGCCAGAGTCGCCTAGCTACGCTGACCACGGCTACGGCCCCCCTCCTTCGCGATGG
AAGGGAGTCTGCCAGGGCGGCGACGACGGCTCGTTCGGCCCGAACAACTGCAACCGCAAG
GTCATAGGGGCGCGGTGGTACGCTGCCGGCGTGAGCGACGACAAGGAGAGGCTCAAGGGC
GAGTACATGTCCCCCAGGGACGCCGAAGGCCACGGAACCCACACCTCCTCCACGGCGGCC
GGCAACGTCGTCGGCAACGTCAGCTTCCACGGGCTGGCGGCCGGCGCGGCGCGAGGCGGC
GCGCCTCGCGCCAGGCTCGCTATTTACAAGGCCTGCTGGGGCGCGCCCCCGTTGTCGGGC
TCGTGCGACGACGCCGATGTGATGAAGGCCATGGACGATGCCGTCCACGATGGCGTTGAC
GTCCTCTCGGTCTCTATCGGCGGGCCCTCTGAGACGCCGGGCACGTTGCATGTCGTCGCG
AGTGGGGTCACGGTTGTCTACGCCGCTGGGAATGATGGGCCTGTCGCCCAGATGGTGGAG
AACTCGTCCCCGTGGCTGTTCACCGTCGCCGCAACGACTGTGGATAGGATGTTCCCCACA
GCCATCACCCTGGGAAACAACCAGATTGTGCATGGGAGAGAAGATCATTTCCACGAGGTC
GTGCCCTTGGTGAACTCAGGTTGTGATCCAGAGTACGTAAACAGCAGCGATGTGAAGGGG
AAGATTGTCTTCTGCATCACACCGGACAGCTTGTATCCATCTGCTACAGTTACTGCTGTT
GCACAGCTAGTGTTGGACAATGGAGGGAAAGGGTTTATATTCACGGGATATAACAGGGAC
AATATCGTTCGGTGGGAACCTGTTACAAGCAAAATGATACCATTCATTTTAATCGATCTT
GAGGTCGCCTACCACATCTTGCAGTACTGCATCTCAACTGACGGTACCCCAAGAGCAAAG
ATCTCTTTGGCTCAAACAACTTTTGGAACTGGGGTTCCTGCCCCCAAGGTAGCAGTGTTC
TCGTCTAGAGGACCTAGTGCCGTCTATCCAGGCGTTCTTAAGCCTGATATAGCTGCACCT
GGGGTGAACATCTTAGCTGCCGCCCCACAAATTCCTTATTACAAAGAGCAGCTGGGTGGC
GTCCTGTACCATTTTGAGTCTGGAACATCCATGGCTACCCCTCATGTGTCTGGTATCGTC
GCCCTGCTTAAATCATTGCATCCTGACTGGTCACCTGCGGCCCTCAAATCGGCGCTCATG
ACAACTGCACTTACCACCGACAACAACGGGATCCCGATACAAGCAGATGGAAACCCAGTA
AAGATCGCCGACGCTTTCGATTACGGAGCAGGGTTTGTCAACCCAACCAAGGCTGACGAT
CCCGGTCTCATATACGACATCCAACCGTCAGATTACCTCAGGTTCTTCGACTGCACGGGA
GGGTTGGGTACCAACGACAACTGCACGGCACCTAGGGCATCTGTTGTAGACCTCAACCTT
CCGTCGATCGCAATCCCTAGTCTCAAGGCGCCCCAAACCGTCACGCGCACCGTCACCAAC
GTTGGGCGCCAGACTAACGCAGTGTACAGAGCAGTCCTCCAGCCGCCTCCGGGCGTGGAG
ATGTCCGTTGAACCGTCGGTCTTGGTCTTCGATGCCAAGAGGAAAGCACAGAGCTTCAAG
GTGGCCTTCAAGGCGACGCGTCGGTTCCAGGGCGACTACACCTTCGGTAGCTTGGCATGG
CACGACGGAGGCAGCCACTGGGTTCGGATCCCGGTTGCGGTCCGCATCGTAATCCAGGAT
CTGTATTCGACCGTCTCTTGA

Peptide Sequence

PEP ID

Zm00001d037651_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:133037591:133043190:1 gene:Zm00001d037651 transcript:Zm00001d037651_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like serine endopeptidase family protein
Sequence

MAPKLPVLRRARSLPLLFLANFVVLQLQCSYGLPLQNEPRQIYIIYLGGRQSDDADLVTA
SHHDLLASVVGSKQEAVESIIYSYRHGFSGFAALLTKSQSTKIAGLPGVVSVTKNRVHHT
RTTRSWDFVGLHYNDDQPNGLLAKAAKYGDDVIVGVIDSGFWPESPSYADHGYGPPPSRW
KGVCQGGDDGSFGPNNCNRKVIGARWYAAGVSDDKERLKGEYMSPRDAEGHGTHTSSTAA
GNVVGNVSFHGLAAGAARGGAPRARLAIYKACWGAPPLSGSCDDADVMKAMDDAVHDGVD
VLSVSIGGPSETPGTLHVVASGVTVVYAAGNDGPVAQMVENSSPWLFTVAATTVDRMFPT
AITLGNNQIVHGREDHFHEVVPLVNSGCDPEYVNSSDVKGKIVFCITPDSLYPSATVTAV
AQLVLDNGGKGFIFTGYNRDNIVRWEPVTSKMIPFILIDLEVAYHILQYCISTDGTPRAK
ISLAQTTFGTGVPAPKVAVFSSRGPSAVYPGVLKPDIAAPGVNILAAAPQIPYYKEQLGG
VLYHFESGTSMATPHVSGIVALLKSLHPDWSPAALKSALMTTALTTDNNGIPIQADGNPV
KIADAFDYGAGFVNPTKADDPGLIYDIQPSDYLRFFDCTGGLGTNDNCTAPRASVVDLNL
PSIAIPSLKAPQTVTRTVTNVGRQTNAVYRAVLQPPPGVEMSVEPSVLVFDAKRKAQSFK
VAFKATRRFQGDYTFGSLAWHDGGSHWVRIPVAVRIVIQDLYSTVS

Transcript Sequence

Transcript ID

Zm00001d037651_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:133037591:133043190:1 gene:Zm00001d037651 gene_biotype:protein_coding transcript_biotype:protein_coding description:Subtilisin-like serine endopeptidase family protein
Sequence

AACCAAAGGTACGGTAGTAGTTTCCCTGCTGCAACAGCTTGGCATGGCGCCCAAGCTTCC
TGTGCTACGACGAGCAAGGTCGCTGCCGCTGCTTTTTCTTGCCAACTTTGTTGTGCTGCA
GTTACAATGCTCCTATGGGCTTCCGCTCCAGAATGAACCGAGACAAATATACATCATCTA
CCTTGGTGGGCGACAAAGTGACGATGCTGATCTTGTCACTGCTTCCCACCATGATCTCCT
TGCGTCTGTTGTCGGCAGCAAGCAAGAAGCGGTAGAGTCGATTATCTACAGCTATAGACA
TGGATTCTCCGGCTTCGCTGCTTTGCTCACGAAATCACAGTCTACAAAGATTGCAGGTCT
GCCTGGCGTAGTTAGTGTAACGAAAAACCGAGTCCACCACACACGCACAACTCGAAGCTG
GGACTTTGTGGGGCTGCACTACAACGACGATCAGCCAAACGGTTTGCTCGCAAAGGCGGC
TAAATACGGAGACGACGTCATTGTCGGCGTCATCGACTCAGGCTTCTGGCCAGAGTCGCC
TAGCTACGCTGACCACGGCTACGGCCCCCCTCCTTCGCGATGGAAGGGAGTCTGCCAGGG
CGGCGACGACGGCTCGTTCGGCCCGAACAACTGCAACCGCAAGGTCATAGGGGCGCGGTG
GTACGCTGCCGGCGTGAGCGACGACAAGGAGAGGCTCAAGGGCGAGTACATGTCCCCCAG
GGACGCCGAAGGCCACGGAACCCACACCTCCTCCACGGCGGCCGGCAACGTCGTCGGCAA
CGTCAGCTTCCACGGGCTGGCGGCCGGCGCGGCGCGAGGCGGCGCGCCTCGCGCCAGGCT
CGCTATTTACAAGGCCTGCTGGGGCGCGCCCCCGTTGTCGGGCTCGTGCGACGACGCCGA
TGTGATGAAGGCCATGGACGATGCCGTCCACGATGGCGTTGACGTCCTCTCGGTCTCTAT
CGGCGGGCCCTCTGAGACGCCGGGCACGTTGCATGTCGTCGCGAGTGGGGTCACGGTTGT
CTACGCCGCTGGGAATGATGGGCCTGTCGCCCAGATGGTGGAGAACTCGTCCCCGTGGCT
GTTCACCGTCGCCGCAACGACTGTGGATAGGATGTTCCCCACAGCCATCACCCTGGGAAA
CAACCAGATTGTGCATGGGAGAGAAGATCATTTCCACGAGGTCGTGCCCTTGGTGAACTC
AGGTTGTGATCCAGAGTACGTAAACAGCAGCGATGTGAAGGGGAAGATTGTCTTCTGCAT
CACACCGGACAGCTTGTATCCATCTGCTACAGTTACTGCTGTTGCACAGCTAGTGTTGGA
CAATGGAGGGAAAGGGTTTATATTCACGGGATATAACAGGGACAATATCGTTCGGTGGGA
ACCTGTTACAAGCAAAATGATACCATTCATTTTAATCGATCTTGAGGTCGCCTACCACAT
CTTGCAGTACTGCATCTCAACTGACGGTACCCCAAGAGCAAAGATCTCTTTGGCTCAAAC
AACTTTTGGAACTGGGGTTCCTGCCCCCAAGGTAGCAGTGTTCTCGTCTAGAGGACCTAG
TGCCGTCTATCCAGGCGTTCTTAAGCCTGATATAGCTGCACCTGGGGTGAACATCTTAGC
TGCCGCCCCACAAATTCCTTATTACAAAGAGCAGCTGGGTGGCGTCCTGTACCATTTTGA
GTCTGGAACATCCATGGCTACCCCTCATGTGTCTGGTATCGTCGCCCTGCTTAAATCATT
GCATCCTGACTGGTCACCTGCGGCCCTCAAATCGGCGCTCATGACAACTGCACTTACCAC
CGACAACAACGGGATCCCGATACAAGCAGATGGAAACCCAGTAAAGATCGCCGACGCTTT
CGATTACGGAGCAGGGTTTGTCAACCCAACCAAGGCTGACGATCCCGGTCTCATATACGA
CATCCAACCGTCAGATTACCTCAGGTTCTTCGACTGCACGGGAGGGTTGGGTACCAACGA
CAACTGCACGGCACCTAGGGCATCTGTTGTAGACCTCAACCTTCCGTCGATCGCAATCCC
TAGTCTCAAGGCGCCCCAAACCGTCACGCGCACCGTCACCAACGTTGGGCGCCAGACTAA
CGCAGTGTACAGAGCAGTCCTCCAGCCGCCTCCGGGCGTGGAGATGTCCGTTGAACCGTC
GGTCTTGGTCTTCGATGCCAAGAGGAAAGCACAGAGCTTCAAGGTGGCCTTCAAGGCGAC
GCGTCGGTTCCAGGGCGACTACACCTTCGGTAGCTTGGCATGGCACGACGGAGGCAGCCA
CTGGGTTCGGATCCCGGTTGCGGTCCGCATCGTAATCCAGGATCTGTATTCGACCGTCTC
TTGAATCGATCCCATTGCGGAACTCGTCTAGAAAAAGAAATAATGTTACATGAAGCTAGC
GAGTGTTTCCATAAGGAACCCTCGCTCGTGGTGCCAAGACCGTATTTGGTGCATATATAT
GAAAAATATATATCCT