Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037625_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:6:132204822:132210441:-1 gene:Zm00001d037625 gene_biotype:protein_coding transcript_biotype:protein_coding description:PRP38 family protein
Sequence

ATGTGGTATGAGCCCTATTTGAGGGATGATGAGGAGTTCTCCCCCGGATCTAATGGCCGC
AAGACAACCATGGGTGTTTATGTGCGTGATCTTATACTTGGACAGTACTACTTTGATAGT
CTTCTACCAAGAATTCCTCTCCCAGTAACTCGTCAGATTACAGCCAATCTTGAAAAGATG
AAATTGCCCACTAAGCTTTCTGGGGCAACTGGAGACTCCAGTCGTCAGGGATCAGAAGAT
ACTGCACGCCGTCCTCCTTCAGTGAAAGCTTCTCTGTCAGTTTCCTTTGGACAGCGTGCT
CCACATCGGGCTTCCACCAGGGATTCATCTCCAGTTCGTCGAACAGTCACCCGTGATGGT
CATCGAAGTTCATACTCACCATCTCGTCGTAGTGGTAGCCGTGAGGGTCCTGATCATGAC
CGTTCTGACCGGGAACTGGATCATTCTAGTCGTGACCGTGAAAGAGCCCGGGATCGTTCA
AACCGGGATCGGTATCATTCAAGCCGAGACCTTGACCGTGACAAGGATGCCAGAGATTAT
CATCGGCATGAGCGTGATAGCAGGGATCGTGAGTACTACAGGTCCAGGCATTCAGAAGAA
AGACGGGACGACAGAAGAGATCATGAAAGTAGCAGGCACAGGCGCTCTAGCTCTCGCCAC
AGGAGCAGGAGTAGGAGCCGAAGCAGGAGCAGGAGTAGGAGCAGGAGAAGCCGCAGCCGA
AGCACGAGCAGGAGGAGCCTGAATGAGCAGCGATCCAGCCCATTCAGGGATGCAAATAAA
GAGAAGGCAGCCACCGTGTCGAGCAACCTAGCAAAGCTGAAGGACTTGTACGGTGACATA
ACTGCAAAGAAGGAAGACAGTGATGCTGAAAAGCTTCACCGTGATTCATGCGCTGAGGAG
GTCATCAGGCTGGGAGGCCCTCGATGGAGGTAA

Peptide Sequence

PEP ID

Zm00001d037625_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:6:132204822:132210441:-1 gene:Zm00001d037625 transcript:Zm00001d037625_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:PRP38 family protein
Sequence

MWYEPYLRDDEEFSPGSNGRKTTMGVYVRDLILGQYYFDSLLPRIPLPVTRQITANLEKM
KLPTKLSGATGDSSRQGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTVTRDG
HRSSYSPSRRSGSREGPDHDRSDRELDHSSRDRERARDRSNRDRYHSSRDLDRDKDARDY
HRHERDSRDREYYRSRHSEERRDDRRDHESSRHRRSSSRHRSRSRSRSRSRSRSRRSRSR
STSRRSLNEQRSSPFRDANKEKAATVSSNLAKLKDLYGDITAKKEDSDAEKLHRDSCAEE
VIRLGGPRWR

Transcript Sequence

Transcript ID

Zm00001d037625_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:132204822:132210441:-1 gene:Zm00001d037625 gene_biotype:protein_coding transcript_biotype:protein_coding description:PRP38 family protein
Sequence

GGCCCTTAACGGAACAATACTTATCTTTTTCCCTGCCCCCGCGGCCGCCGCCCCGAACGC
GCACGCCTCCTCCGCCGAAGCCAAGCAAACCACCGACCTCGACGGAGTCTTCTAGCCGTC
ACCCTCGTTGTCGCCCTGCTCCTCCTCTCAGCCGGTCCGGCCGGCGGCGTGGCGTGAAGA
TCAATCCGGACCCGGAACGAGTTCCCTCTTTTGCTGGTTACATAAACTTTGGAATAGGAG
GATATCCCATATTGATCTTTGTGATTGAGATTGATTTTTTTTCTGGAAAATGGAGATACA
AACTTCAGGGAAGCCCATTGATGTGCTGATGGAGAAGGTTCTTAGCATGAACATTCTGTC
TTCTGATTACTTTAAGGAGCTCTATAGGTTGAAAACCTATCATGAGGTCATCGATGAGAT
CTACAACACTGTCAAACATGTGGAGCCTTGGATGACTGGCAATTGCAGAGGCCCCTCCAC
TGCATTCTGTCTTCTATACAAGTTCTTTACCATGAAGCTTACTGTCAAACAGATGCACGG
TTTGTTGAAGCATCCTGACTCCCCACACATTAGAGCTGTAAGTTTCTGTTTCCTGCCCTT
CTGTTTGCTGATGCTGAATGTCTTGCTTCATGGCCCTGTATCTATTCATTAGGCATGAGG
TTAGTGTATGAATCTATATGTTTATTGGGATGATTATAAAACTTATTTCGGAAGTATTTT
TTGCAATGAAAAATCTTACATTCCTTGCGAATCACTTGTACATAATTTTGTGCTTACATT
TTGGTTATAGCCACTAACGGTCCGACAACTTGTTTCTTTGGATGGACTTGTGGCTGAATT
TCTTGGTCCTAGGACACGGGGATGACAAAGTTTGCAAGAAGTTCATAGTGTACCAGTCTG
TGCTTTGGAGTTGTGAGCATTTTGTTTTTTTTGTCTTTAGTGCAGATTGGTTTCTTGTAT
CTTCGGTATGTTGCAGACCCAAAGGTTCTTTGGATGTGGTATGAGCCCTATTTGAGGGAT
GATGAGGAGTTCTCCCCCGGATCTAATGGCCGCAAGACAACCATGGGTGTTTATGTGCGT
GATCTTATACTTGGACAGTACTACTTTGATAGTCTTCTACCAAGAATTCCTCTCCCAGTA
ACTCGTCAGATTACAGCCAATCTTGAAAAGATGAAATTGCCCACTAAGCTTTCTGGGGCA
ACTGGAGACTCCAGTCGTCAGGGATCAGAAGATACTGCACGCCGTCCTCCTTCAGTGAAA
GCTTCTCTGTCAGTTTCCTTTGGACAGCGTGCTCCACATCGGGCTTCCACCAGGGATTCA
TCTCCAGTTCGTCGAACAGTCACCCGTGATGGTCATCGAAGTTCATACTCACCATCTCGT
CGTAGTGGTAGCCGTGAGGGTCCTGATCATGACCGTTCTGACCGGGAACTGGATCATTCT
AGTCGTGACCGTGAAAGAGCCCGGGATCGTTCAAACCGGGATCGGTATCATTCAAGCCGA
GACCTTGACCGTGACAAGGATGCCAGAGATTATCATCGGCATGAGCGTGATAGCAGGGAT
CGTGAGTACTACAGGTCCAGGCATTCAGAAGAAAGACGGGACGACAGAAGAGATCATGAA
AGTAGCAGGCACAGGCGCTCTAGCTCTCGCCACAGGAGCAGGAGTAGGAGCCGAAGCAGG
AGCAGGAGTAGGAGCAGGAGAAGCCGCAGCCGAAGCACGAGCAGGAGGAGCCTGAATGAG
CAGCGATCCAGCCCATTCAGGGATGCAAATAAAGAGAAGGCAGCCACCGTGTCGAGCAAC
CTAGCAAAGCTGAAGGACTTGTACGGTGACATAACTGCAAAGAAGGAAGACAGTGATGCT
GAAAAGCTTCACCGTGATTCATGCGCTGAGGAGGTCATCAGGCTGGGAGGCCCTCGATGG
AGGTAACTTTGAGACCTGTAGAACTCTGGTTTCCGCTTTGTTCTGCCAGCCTCTCTGTAG
GCCTTCTTGAAAATGCTCTTTATGTTCCCAAACTTGATAGAGTCGACTGGTACTTCGGTA
TCTTGACTTGTTGTCGCCTGACATTTGCCATTAATGTATGTTGTTTGG