Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037606_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:6:131470609:131476267:-1 gene:Zm00001d037606 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin subunit alpha

Sequence

ATGTCGCTCCGGCCGAGCGAGCGGGAGCAGATGCGGAAGGGCAACTACAAGCAGACGGTG
GACGCCGAGGAGAGCCGCCGCCGCCGCGAGGGCCAGATGGTCGACATCCGCAAGGCCAAG
CGAGAGGAAAGCCTCCAGAAGAAGCGCCGCGATGGGTTCCCCGCCGCCGGCGCCGTGCCG
CCGATGGGCCACTCCACCGCACTCCAGCAGAAGCTCGATGGCTTGCCGGCGATGGTACAG
GCCGTTCACTCCAACGACCCCACTGTGCAGCTTGAGGCCACCACGCAGTTCAGGAAGCTG
CTCTCCATAGAGCGTAGTCCCCCAATTGAAGAGGTGATCAGCACAGGAGTCGTGCCCCGA
TTCATTGAGTTCCTTACACGTGAGGACCATCCACAACTCCAGTTTGAGGCTGCATGGGCG
CTCACCAACATTGCATCAGGCACATCAGAGAACACTAAGGTGGTGGTTGAGAGTGGTGCT
GTGCCCATCTTTGTTAAGCTCCTCAACTCCAATAGCGAGGATGTTCGTGAACAGGCTGTA
TGGGCTTTAGGTAATGTTGCTGGTGACTCCCCAAAGTGCCGTGATCTGGTGCTAGGCCAT
GGTGGGCTATTCCCCTTGCTGCAACAGCTTAATGAGCATGCTAAGCTCTCGATGCTGAGG
AATGCCACATGGACACTATCAAACTTCTGCCGTGGGAAGCCACAACCGAACTTTGATCAG
GTCAAACCAGCATTGCCAGCACTTCAGCAACTTATCCACTCTCAGGATGAGGAGGTCCTA
ACTGATGCCTGTTGGGCTCTATCATACCTATCTGATGGGACTAATGACAAAATCCAAGCT
GTTATTGAATCTGGCGTGTTCCCTCGCCTTGTGGAACTTCTGATGCATCCTTCAGCCTCT
GTACTGATTCCAGCTCTGCGCACGGTGGGTAACATCGTAACTGGGGACGACATGCAGACT
CAGAAACTTCTACACACACTGGAATCATTATTATTATTTTTGGTTTAG

Peptide Sequence

PEP ID

Zm00001d037606_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:6:131470609:131476267:-1 gene:Zm00001d037606 transcript:Zm00001d037606_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin subunit alpha

Sequence

MSLRPSEREQMRKGNYKQTVDAEESRRRREGQMVDIRKAKREESLQKKRRDGFPAAGAVP
PMGHSTALQQKLDGLPAMVQAVHSNDPTVQLEATTQFRKLLSIERSPPIEEVISTGVVPR
FIEFLTREDHPQLQFEAAWALTNIASGTSENTKVVVESGAVPIFVKLLNSNSEDVREQAV
WALGNVAGDSPKCRDLVLGHGGLFPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQPNFDQ
VKPALPALQQLIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLMHPSAS
VLIPALRTVGNIVTGDDMQTQKLLHTLESLLLFLV

Transcript Sequence

Transcript ID

Zm00001d037606_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:131470609:131476267:-1 gene:Zm00001d037606 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin subunit alpha

Sequence

CCCTTCCCGTTCCCCAATTCGAAATCGAGTCGGGTACTCGGGTCGGTCTTGCCGTGCGTG
CGTGGCTGCGCGAACCAGCCCACGCTCCCACTCCCCGCCCGCCACCGCCGGGTCCCTCTA
GGGTTTTGCCGCGATGTCGCTCCGGCCGAGCGAGCGGGAGCAGATGCGGAAGGGCAACTA
CAAGCAGACGGTGGACGCCGAGGAGAGCCGCCGCCGCCGCGAGGGCCAGATGGTCGACAT
CCGCAAGGCCAAGCGAGAGGAAAGCCTCCAGAAGAAGCGCCGCGATGGGTTCCCCGCCGC
CGGCGCCGTGCCGCCGATGGGCCACTCCACCGCACTCCAGCAGAAGCTCGATGGCTTGCC
GGCGATGGTACAGGCCGTTCACTCCAACGACCCCACTGTGCAGCTTGAGGCCACCACGCA
GTTCAGGAAGCTGCTCTCCATAGAGCGTAGTCCCCCAATTGAAGAGGTGATCAGCACAGG
AGTCGTGCCCCGATTCATTGAGTTCCTTACACGTGAGGACCATCCACAACTCCAGTTTGA
GGCTGCATGGGCGCTCACCAACATTGCATCAGGCACATCAGAGAACACTAAGGTGGTGGT
TGAGAGTGGTGCTGTGCCCATCTTTGTTAAGCTCCTCAACTCCAATAGCGAGGATGTTCG
TGAACAGGCTGTATGGGCTTTAGGTAATGTTGCTGGTGACTCCCCAAAGTGCCGTGATCT
GGTGCTAGGCCATGGTGGGCTATTCCCCTTGCTGCAACAGCTTAATGAGCATGCTAAGCT
CTCGATGCTGAGGAATGCCACATGGACACTATCAAACTTCTGCCGTGGGAAGCCACAACC
GAACTTTGATCAGGTCAAACCAGCATTGCCAGCACTTCAGCAACTTATCCACTCTCAGGA
TGAGGAGGTCCTAACTGATGCCTGTTGGGCTCTATCATACCTATCTGATGGGACTAATGA
CAAAATCCAAGCTGTTATTGAATCTGGCGTGTTCCCTCGCCTTGTGGAACTTCTGATGCA
TCCTTCAGCCTCTGTACTGATTCCAGCTCTGCGCACGGTGGGTAACATCGTAACTGGGGA
CGACATGCAGACTCAGAAACTTCTACACACACTGGAATCATTATTATTATTTTTGGTTTA
GCAAGAAATAAACATGTATTATATTGTTGCATTCATATCTACATGTTAGTCTATCTCCCT
ATCTTGTATGTATACTTCTGCCCTTAGTTTCATTGCATCTCTCTCTCTATGCAATTCATT
ATTCTGCCAGACTAAGTCACCTGATTGCATCTCCTGTAGAGATGCAGTTTTTTTTAAATA
TCCACATACACACACAAACACACACTAAGTTGATGTTTAATCAATTGGCTGATTCGTTAA
ACCTAAGGTTATAGTTCTTTTTTCAAATGCTAGTTTACTACAAATGCACTTCTGCAGTAC
TGCTTAGCAGGTGCTATTGGATGTAGGTCTTGATGATTACAGGTTCTTAAGCTTACTTGC
AACTATCCATATAATTGGTCCTATTGGATTGGATGTCAGCCTTGATGACAAGAATTCCTT
GCGACTTCCATTCAAATAATCTTTTCAAAATTAGCTTTCCACATGTGTCATTGACAATCA
AGCACTTCCATGCCTTTTGAACCTACTGACCACCAACCACAAGAAAAGCATCAAGAAAGA
AGCATGCTGGACAATCTCAAACATCACAGCTGGTAACAGGGAACAGATTCAGGCCGTGAT
TAATGCAAACATAATTGCACCTCTGGTGCAACTTCTGCAAACTGCTGAATTTGACATCAA
GAAAGAAGCAGCCTGGGCAATTTCAAATGCCACTTCTGGTGGCACACATGATCAGATCAA
GTACCTTGTTGCCCAGGGTTGCATTAAGCCACTCTGTGATCTGCTTGTTTGCCCGGATCC
CAGAATTGTAACAGTTTGCTTGGAGGGTCTTGAGAACATCCTGAAAGTTGGCGAGGCAGA
GAAAAATCTTGGTGCAGGCGATGTCAATGTTTACGCACAGATGATTGATGATGCTGAGGG
CCTGGACAAGATTGAGAACCTACAGAGCCATGACAACACTGAGATATATGAGAAGGCTGT
CAAGATGCTCGAATCTTACTGGCTAGAGGAGGAAGATGATGCCATGCCCTCTGGCGACAA
TCCCCAGAATGGCTTCAACTTTGGGAACCAGCCCTCTGTTCCATCAGGTGGATTCAACTT
CGGCTGAAGATGCCCATTTGGAATGGCGGCTGTGCCATTGTGCCTTGGCCTAGTGGTTGG
GGCTAGTCAGAGTTGGGGTAGTGGCGTCGTCCTCCAAAACCTTGGTTCGGTCCCATTGGT
CTGGTCTCAGGTGTTTGTCATGTCAGTCCCAGTCAGCAGGGTCAGTCCTTGTGCTGCATC
ACCAGTGGTGCTGCATGGAAGTGGTCAGTCTTCAAGGTCAGCCGGTTGGATCATTTGGGC
TCTTGCTCCCACCGCCTCTGGTGGTAGGCATGAAGTCGCAGGTGTTGTCGGGAGTTGGGT
TTTGCCTCCAATATAGCATGAATGAATTATATTGTTTTACCTATTTGATGAGGTAGAAGA
AAAGAACCTTGGAAGATAGGGAATGTGTTGGTTTTTGTCAAAGCGGTTCCTGTCCTGTAT
GACATGTTGCATGAGTATTGACACAAATTATAAGACATAATGGCAAATAGGTTTTTGGGA
GTC