Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037538_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:6:128640270:128648518:-1 gene:Zm00001d037538 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arginine--tRNA ligase chloroplastic/mitochondrial
Sequence

ATGGGAGATGAGACCTCAACCTCGGTTGCTCCCCAGGAACAGGAATCCACTGTGCAGGCT
GGGAGTGTCAAGCAACAGCTCTCCGGGCTGGTCCTTATGTCCCTCCGGGCTACTGTGCCT
GAGGTGGAGGTAGAACCGATGGTTGAAGTTTCAGCAAAGTTTGCTGACTACCAATGCAAC
AATGCTATGGGATTATGGTCAAAGGTTAAAGGATCTGGAACCAGTTTCAAAAACCCTAAT
GCCATTGGACAGGCCATTGCCAAGAACTTGCCTTCTTCTGATATTATTGAATCCACATCT
GTTGCTGGACCTGGTTTTGTGAATATTGTCTTATCAAACCGCTGGGTTGCACAGAGAATA
CAAGACATGCTCGTTAACGGTATCAAGACTTGGGCACCAATTCTTCCAGTAAAGAGGGCA
GTGATTGATTTTTCATCACCTAATATTGCAAAGGAAATGCATGTGGGACATCTAAGGTCT
ACAATTATTGGAGATACATTAGCACGCATGTTTGAGTTCTCGAATGTTGATGTTCTGCGA
AGAAACCATGTAGGAGATTGGGGTACACAGTTCGGGATGCTAATAGAATATCTTTTTGAG
AAATTTCCAAATTGGCAAGAGATTGGTAGCCAGGCCATTGGAGACCTTCAGATTTTCTAT
AAAGCATCCAAGCATAGATTTGACAATGATCCAGAATTTAAAGCAAGGGCTCAACAAGGA
GTTGTTCGGCTACAGGGAGGAGAAGAGAGATATCGAGAAGCATGGAAAAAGATTTGTGAC
ATTAGCAGGAGTGAATTTGACTTGGTCTACAAACGCCTAAATGTGGTGCTTGAAGAAAAG
GGGGAGAGTTTCTATAATCCTTATATTCCTCAAGTGTTGGAGGAATTGAGTAGCAAAGGC
TTGATCAAGGAGAGTGAGGGTGCCAGAGTTATATTTATTCAAGGTCATCAGATCCCCTTG
ATAGTGGTTAAGAGTGATGGTGGCTTCAACTATGCCTCGACTGACTTGGCTGCCCTTTGG
TATCGGCTCAATGTTGAGCAGGCAGAGTGGATCATATACGTGACAGATGTTGGTCAGCAG
CAGCACTTTGACATGTTTTTCAGTGCTGCAAAGATGGCTGGTTGGCTGCCAGGTCCAAAC
GAAAAGAAGTTTCCGAAAACAAGCCATGTTGGATTTGGTCTAGTTCTTGGTTCAGATGGC
AAGCGGTTCCGAACGCGCAGTACTGAGGTTGTTCGATTGGTAGAGCTACTTGATGAGGCT
AAATCTCGGAGCAAATCAGAACTACTACAACGGCTCACTGAAAATGGCAAAATTGTTGAC
TGGACGGATGAGGAATTAGAGCAAACTTCAGAGGCAGTTGGATATGGTGCTGTGAAGTAT
GTTTTGGTATGCTGA

Peptide Sequence

PEP ID

Zm00001d037538_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:6:128640270:128648518:-1 gene:Zm00001d037538 transcript:Zm00001d037538_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arginine--tRNA ligase chloroplastic/mitochondrial
Sequence

MGDETSTSVAPQEQESTVQAGSVKQQLSGLVLMSLRATVPEVEVEPMVEVSAKFADYQCN
NAMGLWSKVKGSGTSFKNPNAIGQAIAKNLPSSDIIESTSVAGPGFVNIVLSNRWVAQRI
QDMLVNGIKTWAPILPVKRAVIDFSSPNIAKEMHVGHLRSTIIGDTLARMFEFSNVDVLR
RNHVGDWGTQFGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKASKHRFDNDPEFKARAQQG
VVRLQGGEERYREAWKKICDISRSEFDLVYKRLNVVLEEKGESFYNPYIPQVLEELSSKG
LIKESEGARVIFIQGHQIPLIVVKSDGGFNYASTDLAALWYRLNVEQAEWIIYVTDVGQQ
QHFDMFFSAAKMAGWLPGPNEKKFPKTSHVGFGLVLGSDGKRFRTRSTEVVRLVELLDEA
KSRSKSELLQRLTENGKIVDWTDEELEQTSEAVGYGAVKYVLVC

Transcript Sequence

Transcript ID

Zm00001d037538_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:128640270:128648518:-1 gene:Zm00001d037538 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arginine--tRNA ligase chloroplastic/mitochondrial
Sequence

CTCGCGGCAGCAGCAACTGCAGTGGCGGCGCCTACCCCCACGCGCCTCCGCCTCCCGCTC
CTCTCCCGCACCCTGCGCTCTGCCAGGTCACTGTAGAAGCTCTTATTCCTCCAGGCTCCT
ACGGTTCTCGTGCAGTGCCACCACCATGGGAGATGAGACCTCAACCTCGGTTGCTCCCCA
GGAACAGGAATCCACTGTGCAGGCTGGGAGTGTCAAGCAACAGCTCTCCGGGCTGGTCCT
TATGTCCCTCCGGGCTACTGTGCCTGAGGTGGAGGTAGAACCGATGGTTGAAGTTTCAGC
AAAGTTTGCTGACTACCAATGCAACAATGCTATGGGATTATGGTCAAAGGTTAAAGGATC
TGGAACCAGTTTCAAAAACCCTAATGCCATTGGACAGGCCATTGCCAAGAACTTGCCTTC
TTCTGATATTATTGAATCCACATCTGTTGCTGGACCTGGTTTTGTGAATATTGTCTTATC
AAACCGCTGGGTTGCACAGAGAATACAAGACATGCTCGTTAACGGTATCAAGACTTGGGC
ACCAATTCTTCCAGTAAAGAGGGCAGTGATTGATTTTTCATCACCTAATATTGCAAAGGA
AATGCATGTGGGACATCTAAGGTCTACAATTATTGGAGATACATTAGCACGCATGTTTGA
GTTCTCGAATGTTGATGTTCTGCGAAGAAACCATGTAGGAGATTGGGGTACACAGTTCGG
GATGCTAATAGAATATCTTTTTGAGAAATTTCCAAATTGGCAAGAGATTGGTAGCCAGGC
CATTGGAGACCTTCAGATTTTCTATAAAGCATCCAAGCATAGATTTGACAATGATCCAGA
ATTTAAAGCAAGGGCTCAACAAGGAGTTGTTCGGCTACAGGGAGGAGAAGAGAGATATCG
AGAAGCATGGAAAAAGATTTGTGACATTAGCAGGAGTGAATTTGACTTGGTCTACAAACG
CCTAAATGTGGTGCTTGAAGAAAAGGGGGAGAGTTTCTATAATCCTTATATTCCTCAAGT
GTTGGAGGAATTGAGTAGCAAAGGCTTGATCAAGGAGAGTGAGGGTGCCAGAGTTATATT
TATTCAAGGTCATCAGATCCCCTTGATAGTGGTTAAGAGTGATGGTGGCTTCAACTATGC
CTCGACTGACTTGGCTGCCCTTTGGTATCGGCTCAATGTTGAGCAGGCAGAGTGGATCAT
ATACGTGACAGATGTTGGTCAGCAGCAGCACTTTGACATGTTTTTCAGTGCTGCAAAGAT
GGCTGGTTGGCTGCCAGGTCCAAACGAAAAGAAGTTTCCGAAAACAAGCCATGTTGGATT
TGGTCTAGTTCTTGGTTCAGATGGCAAGCGGTTCCGAACGCGCAGTACTGAGGTTGTTCG
ATTGGTAGAGCTACTTGATGAGGCTAAATCTCGGAGCAAATCAGAACTACTACAACGGCT
CACTGAAAATGGCAAAATTGTTGACTGGACGGATGAGGAATTAGAGCAAACTTCAGAGGC
AGTTGGATATGGTGCTGTGAAGTATGTTTTGGTATGCTGATCTCAAGAATAATCGTCTGA
CTAATTACACATTTAGTTTTGAACAAATGCTGAGCGATAAGGGAAATACTGCTGTGTACC
TTCAGTATGCACATGCTCGTATTTGTTCCATTATTCGGAAATCCAACAAGGATGTGGAAG
ATCTGAAGATGACTGGAGCCATTTCTCTTGACCATCCAGATGAGCGTGTGTTGGGGCTGT
ATCTTATCCGATTTGCTGAGGTGGTTGAAGAGGCATGCACGAATCTGCTTCCAAATGTTG
TGTGTGAATACTTGTACAATCTATCTGAAATGTTCACAAAATTCTATACCAACTGTCAGG
TGGTCGGGTCACCGGAGGAGACGAGCCGACTGTTGCTTTGCCAAGCGACTGCTGTTGTCA
TGCGACAGTGCTTCAATCTGCTAGGGATCACCCCAGTCTACAAGCTGTGATCGGCTGCAT
GTTTGAAGTTTGATTTATACATTCAACATCGCTTTACGTAGAAACCCATTCATCATGGTT
GCAGTTTTGGCCTTGTAACCTAGTTGAGGCAGTTAACAGACTATAATCCATCTCCCTGTT
TGAAAATAGAAGCAACTCAAAAGTTTGTAACAAAATATGCTCTGCAGAGTTTCTAT