Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037518_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:6:127912410:127933592:-1 gene:Zm00001d037518 gene_biotype:protein_coding transcript_biotype:protein_coding description:DCD (Development and Cell Death) domain protein
Sequence

ATGCAGACGAATAATAGCAACTATGGGGAGCTTACCCGCAATATCCGAGAAAACCAGCTT
GGAGGGGTGATCTTTGGTTGCAAACACGATACGATTGAAGAATGCTTCAGAAAACAGCTA
TTCGGTCTGCCTTCAGTCCATTATTCATATGTTAGAAATGTCAAACCTGGCATGCCTTTA
TTTCTATTCAATTATAGTGACAGAAAGCTCCATGGAATTTTCGAAGCTGCAAGTCCTGGT
GAGATGTATATTGATTCATATGCTTGGAGTAATGATGGTTGTTTAAGGTCAGCTTTTCCT
GCACAGGTTCGTATTTGCACAAAGACTCGGTATCCACCTCTGCTGGAGAGCCAATTTAAA
ACATTGCTTGGTGACAACTATTACAACCATCACCACTTCTATTTTGAGCTTGACCATGCA
CAGACAAGAGCTTTAATTTCTTTGTTCAAATCACTTGCTCCGTCTAATTTCATTCAAGTT
CCAGCTGTTTCAAGCAAAAGGAATCTTGCAGTTCCTGACCCAAAGAAAATCACAGCAAAT
TCTAAGGAAATCAATCCATTTAGTGTTCTATCAAATACAGCCGCTCCAGTTAACTGGGCT
GATGATGTGGAAAATGCTAGTAACTCGGATGAGAAGAAATCTGGTGGTTCAGTTTCTGAT
TATGACAATTTGGATGACAATTTTCTTCAAAATCAATTTGGTCCTCATTCAAATCCAGAT
GAGGTCAGTCAAACTTCCTCAGGCAAAATTGATGGCCAAGGACTGGAGCTTATTGAATGT
AATCATCCACTTGTCAATACTGTGAATGGTAAAAGAATCATAACTGATGAATCAATGCTT
TTGAATTCACACAATGAGCATAATGGTGCTGTGGAAGTTGATGAAGTGGAGATTGAAGTT
CACAATAACCCAGGTGGTGGTGTTGGGCTACAGCCAGAAAGACAGACTGTCCTAGAAAAG
CTGAAAGGATTATCTTTCCTACGACAGCAGGATGCCATAACTTCCAAGGATTGTACTCAT
TCTGGTTCAGATCAACGGGTACCTGATGAAACACAGATCAATCCAAACCTTTCCTGTGGC
CCATTTGATGCTACAATGGAAGATAAAACCTCTTTTGATGAGTGCAGCCATGGAAATGCT
GAGGTGCTGCAAATCATCACTGATTTACAGAAGAGGACTGAAGCACTGGAGAAGAAACTG
ATTGGGTCAGACAAAGAAATACTTTCATTGAGGGAAATTTTTAAAGACTCAGGAAGAAAA
GTCCAGCAACTGGAATACATTGTAGATGAGTTACAGTTCAAACTTGACTCTTCCCTGGCT
CACCTTGGAAACATGTGCAATACACTAGCCACCCCATCAATATTCCTGATTGGTGGTTAT
AATGGCGTGACTTGGTTATCATCTCTTGATTCCTTTTCTCCTGAGAAAGACGCGGTCCTA
GGTCTCACACCAATGAGTTCTCCCCGCTCATATGCATCTGCTGCTGTGTTGGATGGACAC
ATATTTGCTTTTGGCGGTGGCGATGGCATGTCATGGTATAACACAGTGGAATGCTATAGC
TCAAGAAATAATGAGTGGACGGAATGCCCCTCCATGAACCAGAAGAAAGGAAGTCTTGCT
GGGATCTGTCTTAATGAGAAAATATACGCTATTGGTGGAGGAGATGGAAATGAATTTTAT
TCAGAAGTTGAGATCTTTGACCCCTACCTTGGGAAGTGGATATGTAGCCCATCTATGCTA
ACCTCTCGGTTTGCTCTTGCTGCGTCCGGACTAAATGGAGTCATCTATACATCTGGTGGC
TATGATGGAAACATGTACTTGAAATCAGCAGAAAGGTATGATCCAAGGGAGGGCTTCTGG
GTCCGGCTTCCAAGTATGAGTACTAGGAGAGGATCCCACACCTTAACTGTCCTTGGAGAC
ACCCTATATGCTATGGGAGGGTATGATGGGGACAAAATGGTTTCTAGCGTTGAGATCTAT
GATCCTAGTCTTAATGCTTGGAGGATAGGTGATCCCATGAACACTCCAAGAGGATATGCC
GCTGCTGTTTATCTTGATGATAGCTTATTCCTAATTGGTGGCATGCAGTCCAGTGTGCAG
ATGTTGGATACTGTGGAAGTTTACAATGCAAGTTCTGGCTGGTCAGTCCTTGGTTCTAGT
TCTATTGGGATGAGGTCCTTCGCATCTGCCGTTGTCTTGTAA

Peptide Sequence

PEP ID

Zm00001d037518_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:6:127912410:127933592:-1 gene:Zm00001d037518 transcript:Zm00001d037518_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:DCD (Development and Cell Death) domain protein
Sequence

MQTNNSNYGELTRNIRENQLGGVIFGCKHDTIEECFRKQLFGLPSVHYSYVRNVKPGMPL
FLFNYSDRKLHGIFEAASPGEMYIDSYAWSNDGCLRSAFPAQVRICTKTRYPPLLESQFK
TLLGDNYYNHHHFYFELDHAQTRALISLFKSLAPSNFIQVPAVSSKRNLAVPDPKKITAN
SKEINPFSVLSNTAAPVNWADDVENASNSDEKKSGGSVSDYDNLDDNFLQNQFGPHSNPD
EVSQTSSGKIDGQGLELIECNHPLVNTVNGKRIITDESMLLNSHNEHNGAVEVDEVEIEV
HNNPGGGVGLQPERQTVLEKLKGLSFLRQQDAITSKDCTHSGSDQRVPDETQINPNLSCG
PFDATMEDKTSFDECSHGNAEVLQIITDLQKRTEALEKKLIGSDKEILSLREIFKDSGRK
VQQLEYIVDELQFKLDSSLAHLGNMCNTLATPSIFLIGGYNGVTWLSSLDSFSPEKDAVL
GLTPMSSPRSYASAAVLDGHIFAFGGGDGMSWYNTVECYSSRNNEWTECPSMNQKKGSLA
GICLNEKIYAIGGGDGNEFYSEVEIFDPYLGKWICSPSMLTSRFALAASGLNGVIYTSGG
YDGNMYLKSAERYDPREGFWVRLPSMSTRRGSHTLTVLGDTLYAMGGYDGDKMVSSVEIY
DPSLNAWRIGDPMNTPRGYAAAVYLDDSLFLIGGMQSSVQMLDTVEVYNASSGWSVLGSS
SIGMRSFASAVVL

Transcript Sequence

Transcript ID

Zm00001d037518_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:127912410:127933592:-1 gene:Zm00001d037518 gene_biotype:protein_coding transcript_biotype:protein_coding description:DCD (Development and Cell Death) domain protein
Sequence

TACATTGGAATATTTTCCTTGTCCGTCTATGAATCACTAGTGTTTTTTCTTGGTAACATG
TTAGGACCAAAGGACCATCAATGCTCCCCTCCTAAAGCTACATCCTTTTCTGTTTTTGTT
CTTTGTAAGAAGATTTGACTGAATTTTTCTTAACATGGGTATTCCAAGTTGTTTCCACTT
TGAAAATCATATTACAAATGTTTGTATCTTTTATTTCTGGTCATTATTGTGGATGTATGC
ATTGTCCCCATATTATGGCTTCATACCCAGTGTTATCCCTTTGATTTCACTGTATATGCT
ACCTCTTTGATTTCACTATATATACCTAACTTATGTGCCTTGTATATTCTCAAATTTTGT
GAAGAACAGGTGCTGGAGGGGCGATCTTGCAATGCAGACGAATAATAGCAACTATGGGGA
GCTTACCCGCAATATCCGAGAAAACCAGCTTGGAGGGGTGATCTTTGGTTGCAAACACGA
TACGATTGAAGAATGCTTCAGAAAACAGCTATTCGGTCTGCCTTCAGTCCATTATTCATA
TGTTAGAAATGTCAAACCTGGCATGCCTTTATTTCTATTCAATTATAGTGACAGAAAGCT
CCATGGAATTTTCGAAGCTGCAAGTCCTGGTGAGATGTATATTGATTCATATGCTTGGAG
TAATGATGGTTGTTTAAGGTCAGCTTTTCCTGCACAGGTTCGTATTTGCACAAAGACTCG
GTATCCACCTCTGCTGGAGAGCCAATTTAAAACATTGCTTGGTGACAACTATTACAACCA
TCACCACTTCTATTTTGAGCTTGACCATGCACAGACAAGAGCTTTAATTTCTTTGTTCAA
ATCACTTGCTCCGTCTAATTTCATTCAAGTTCCAGCTGTTTCAAGCAAAAGGAATCTTGC
AGTTCCTGACCCAAAGAAAATCACAGCAAATTCTAAGGAAATCAATCCATTTAGTGTTCT
ATCAAATACAGCCGCTCCAGTTAACTGGGCTGATGATGTGGAAAATGCTAGTAACTCGGA
TGAGAAGAAATCTGGTGGTTCAGTTTCTGATTATGACAATTTGGATGACAATTTTCTTCA
AAATCAATTTGGTCCTCATTCAAATCCAGATGAGGTCAGTCAAACTTCCTCAGGCAAAAT
TGATGGCCAAGGACTGGAGCTTATTGAATGTAATCATCCACTTGTCAATACTGTGAATGG
TAAAAGAATCATAACTGATGAATCAATGCTTTTGAATTCACACAATGAGCATAATGGTGC
TGTGGAAGTTGATGAAGTGGAGATTGAAGTTCACAATAACCCAGGTGGTGGTGTTGGGCT
ACAGCCAGAAAGACAGACTGTCCTAGAAAAGCTGAAAGGATTATCTTTCCTACGACAGCA
GGATGCCATAACTTCCAAGGATTGTACTCATTCTGGTTCAGATCAACGGGTACCTGATGA
AACACAGATCAATCCAAACCTTTCCTGTGGCCCATTTGATGCTACAATGGAAGATAAAAC
CTCTTTTGATGAGTGCAGCCATGGAAATGCTGAGGTGCTGCAAATCATCACTGATTTACA
GAAGAGGACTGAAGCACTGGAGAAGAAACTGATTGGGTCAGACAAAGAAATACTTTCATT
GAGGGAAATTTTTAAAGACTCAGGAAGAAAAGTCCAGCAACTGGAATACATTGTAGATGA
GTTACAGTTCAAACTTGACTCTTCCCTGGCTCACCTTGGAAACATGTGCAATACACTAGC
CACCCCATCAATATTCCTGATTGGTGGTTATAATGGCGTGACTTGGTTATCATCTCTTGA
TTCCTTTTCTCCTGAGAAAGACGCGGTCCTAGGTCTCACACCAATGAGTTCTCCCCGCTC
ATATGCATCTGCTGCTGTGTTGGATGGACACATATTTGCTTTTGGCGGTGGCGATGGCAT
GTCATGGTATAACACAGTGGAATGCTATAGCTCAAGAAATAATGAGTGGACGGAATGCCC
CTCCATGAACCAGAAGAAAGGAAGTCTTGCTGGGATCTGTCTTAATGAGAAAATATACGC
TATTGGTGGAGGAGATGGAAATGAATTTTATTCAGAAGTTGAGATCTTTGACCCCTACCT
TGGGAAGTGGATATGTAGCCCATCTATGCTAACCTCTCGGTTTGCTCTTGCTGCGTCCGG
ACTAAATGGAGTCATCTATACATCTGGTGGCTATGATGGAAACATGTACTTGAAATCAGC
AGAAAGGTATGATCCAAGGGAGGGCTTCTGGGTCCGGCTTCCAAGTATGAGTACTAGGAG
AGGATCCCACACCTTAACTGTCCTTGGAGACACCCTATATGCTATGGGAGGGTATGATGG
GGACAAAATGGTTTCTAGCGTTGAGATCTATGATCCTAGTCTTAATGCTTGGAGGATAGG
TGATCCCATGAACACTCCAAGAGGATATGCCGCTGCTGTTTATCTTGATGATAGCTTATT
CCTAATTGGTGGCATGCAGTCCAGTGTGCAGATGTTGGATACTGTGGAAGTTTACAATGC
AAGTTCTGGCTGGTCAGTCCTTGGTTCTAGTTCTATTGGGATGAGGTCCTTCGCATCTGC
CGTTGTCTTGTAATTGGTAGCCAGAAGTTTAGAATTCATATCATCAAAATTTGTAACATA
GCTGCCATTACAATTTACATGGAATGGTTAGCACAAATCAGGGTAAACAACCCTTCTGAA
GCATTCTGGTTACCAACAGCGAGATAGGATAACATGCTGGTTCGAAATTTTACTTTTGAA
TCTTCATTCGCGACTAACCCCACATTGTGTGGATGAACGATTTTCTCGGATAATTGTCAA
ACTGATGTAGAATCCAAAAGAACTTTTGTAT