Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037498_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:6:127318662:127321705:-1 gene:Zm00001d037498 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tryptophan aminotransferase related1 description:L-tryptophan--pyruvate aminotransferase 1
Sequence	ATGGCCGGTAGGGAGAGCGGCGGGATGGCGGCGGCGCTGCGCTGCGCTGGAAGGATCGGG ATCCTGGCCACCGTCGCAGTGAACCTCGCGTGGATCGCGACGTACATCCGCCGGCGCTAC TTCGGCGGCGGGAACCGATCCGACAACAACGGTGGCGGCGGGGAGGTGGAGCCGTCAAGA GGGAAGCCGCCGGTCACTTCGGACTCCATCGTCAACCTCGATCATGGCGACCCGACTATG TACGAGGAGTTCTGGCGCGGCACAGGAGATAGCGCCTCGATCTTCATCCCTGGTTGGCAA ACAATGAGCTACTTCTCCGACCTCGGCGGCATCTGTTGGTTCCTGGAGCCTGGATTCGAG CGCGAGGTGCGGCGTCTCCACAGGCTCGTGGGGAATGCCGTTGTAGACGGGTACCATGTG CTCGTCGGGACAGGCTCCACTCAGCTCTTTCAGGCCGTGCTGTACGCGCTCTCACCTGCA AGTGACGGCACACCCATGAACGTCGTCTCACCGGCACCGTACTACTCGTCTTACCCATCT GTGACCAACTATCTAAACTCTGCGCTCTACCGTTGGGCTGGTGATGCCAATACATTTGAT GGCGACACATGTATTGAGCTCGTCTGCTCCCCAAACAACCCTGATGGTGGCCTCCGGAAG CCTGTCATCAAATCCAAGTCTAGCAAGCCTGTTTATGACTTCGCCTACTACTGGCCGCAG TACACACCCATCACCGAGGCAGCTGCCCATGACATCATGCTGTTCACCGTCTCCAAATGC ACCGGCCATGCCGGCACCAGGCTGGGGTGGGCATTGGTGAAGGATACTAAGGTGGCTCAG AAGATGATCAAGTTTATAGAGCTCAACACAATCGGTGTATCCAAGGACTCTCAACTTCGT GCCGCTAAGATTATCGGGGCAATATGTAATGGCTATGAGCCGGTACCATCCTCTGGTAAA ACAAGCCAACTCTTCCATTTCGCCAAGGAAAAAATGGCGGCTCGCTGGGCTAGACTTCGT GCAGCTGTGGCAGCCTCAGACATCTTTACTCTCCCTTATGAGCTATCTGGCTATTGTAGC TTTTCCAATGAGACTGTCACCGCCAATCCTCCATTTGCATGGCTTCGCTACAACAAGGAT GATATTGAAGATCTGGAGGCCTTCCTACTCGAGAAAAAGATTATCACTCGAGGTGGCACA AGGTTTGGAGTGGATGCAAGGGCTGTCAGAGTTAGTATGGTTGACACAGACCAAGCCTTC AATGTGTTCATCAATCGTCTGGCCACAATGAAGTGA

Peptide Sequence

PEP ID	Zm00001d037498_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:6:127318662:127321705:-1 gene:Zm00001d037498 transcript:Zm00001d037498_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tryptophan aminotransferase related1 description:L-tryptophan--pyruvate aminotransferase 1
Sequence	MAGRESGGMAAALRCAGRIGILATVAVNLAWIATYIRRRYFGGGNRSDNNGGGGEVEPSR GKPPVTSDSIVNLDHGDPTMYEEFWRGTGDSASIFIPGWQTMSYFSDLGGICWFLEPGFE REVRRLHRLVGNAVVDGYHVLVGTGSTQLFQAVLYALSPASDGTPMNVVSPAPYYSSYPS VTNYLNSALYRWAGDANTFDGDTCIELVCSPNNPDGGLRKPVIKSKSSKPVYDFAYYWPQ YTPITEAAAHDIMLFTVSKCTGHAGTRLGWALVKDTKVAQKMIKFIELNTIGVSKDSQLR AAKIIGAICNGYEPVPSSGKTSQLFHFAKEKMAARWARLRAAVAASDIFTLPYELSGYCS FSNETVTANPPFAWLRYNKDDIEDLEAFLLEKKIITRGGTRFGVDARAVRVSMVDTDQAF NVFINRLATMK

Transcript Sequence

Transcript ID	Zm00001d037498_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:127318662:127321705:-1 gene:Zm00001d037498 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tryptophan aminotransferase related1 description:L-tryptophan--pyruvate aminotransferase 1
Sequence	ATATGGGGTCACGCCGCACTCACACATGCATCCATAAACCCTCAGCAGAGCCTTGTGTCG CGTCCTCTCCTCGATAACCCAGGCCACATCGTCCTTCCGCGCCGCGCCGCCGGCGACCTA ACAACCCAGAGGCCTCAGCACCGCACGCTTGCACGTACGTCCAGGCGCGCTCGCCGTTAC GCCCACGGGGATCCAGGCTTTCCTTCGCTGCCGTTGCTGGTCGAGTGCGCCACGCCGAAA GGTGATCGAGCTGACGAGCGCTAGACGCCACCGGCCGGCGCGGCGTGGCAAGGCAAGACG CCGTGCGGGTCTCGCCCTCGTCAGCTATAAGACCGCATCCCCCCCTGCGGAGGGAGGCAC ACACACAGACACAGCGCTCTCACTAGCCTCGCATTCCGTCCCTGCAGTGCAGGGGCAGGC CGGTGAGGTCTGGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGATGGCCGGTAGG GAGAGCGGCGGGATGGCGGCGGCGCTGCGCTGCGCTGGAAGGATCGGGATCCTGGCCACC GTCGCAGTGAACCTCGCGTGGATCGCGACGTACATCCGCCGGCGCTACTTCGGCGGCGGG AACCGATCCGACAACAACGGTGGCGGCGGGGAGGTGGAGCCGTCAAGAGGGAAGCCGCCG GTCACTTCGGACTCCATCGTCAACCTCGATCATGGCGACCCGACTATGTACGAGGAGTTC TGGCGCGGCACAGGAGATAGCGCCTCGATCTTCATCCCTGGTTGGCAAACAATGAGCTAC TTCTCCGACCTCGGCGGCATCTGTTGGTTCCTGGAGCCTGGATTCGAGCGCGAGGTGCGG CGTCTCCACAGGCTCGTGGGGAATGCCGTTGTAGACGGGTACCATGTGCTCGTCGGGACA GGCTCCACTCAGCTCTTTCAGGCCGTGCTGTACGCGCTCTCACCTGCAAGTGACGGCACA CCCATGAACGTCGTCTCACCGGCACCGTACTACTCGTCTTACCCATCTGTGACCAACTAT CTAAACTCTGCGCTCTACCGTTGGGCTGGTGATGCCAATACATTTGATGGCGACACATGT ATTGAGCTCGTCTGCTCCCCAAACAACCCTGATGGTGGCCTCCGGAAGCCTGTCATCAAA TCCAAGTCTAGCAAGCCTGTTTATGACTTCGCCTACTACTGGCCGCAGTACACACCCATC ACCGAGGCAGCTGCCCATGACATCATGCTGTTCACCGTCTCCAAATGCACCGGCCATGCC GGCACCAGGCTGGGGTGGGCATTGGTGAAGGATACTAAGGTGGCTCAGAAGATGATCAAG TTTATAGAGCTCAACACAATCGGTGTATCCAAGGACTCTCAACTTCGTGCCGCTAAGATT ATCGGGGCAATATGTAATGGCTATGAGCCGGTACCATCCTCTGGTAAAACAAGCCAACTC TTCCATTTCGCCAAGGAAAAAATGGCGGCTCGCTGGGCTAGACTTCGTGCAGCTGTGGCA GCCTCAGACATCTTTACTCTCCCTTATGAGCTATCTGGCTATTGTAGCTTTTCCAATGAG ACTGTCACCGCCAATCCTCCATTTGCATGGCTTCGCTACAACAAGGATGATATTGAAGAT CTGGAGGCCTTCCTACTCGAGAAAAAGATTATCACTCGAGGTGGCACAAGGTTTGGAGTG GATGCAAGGGCTGTCAGAGTTAGTATGGTTGACACAGACCAAGCCTTCAATGTGTTCATC AATCGTCTGGCCACAATGAAGTGAAATTTCAGTGCAAATTAATAAAGCACTTTGTGGCTA CTACAAGGATGACCGCGTTCTAGATGGAACAATCGATGCTTTGGAAAGCTTAATAATGTT TTATGTTGTTGAATAATTCCGTGTGTTTTCGGGTATGTTGTGTAATACTCAATGTCAAAT CCTATGCTTAATCGATGTTGTGGTCCATCCTGTTATCAGCATGGCCAATTATATATGGAT GACCGTCACTGCTCA