Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037497_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:6:127271263:127274672:1 gene:Zm00001d037497 gene_biotype:protein_coding transcript_biotype:protein_coding description:Villin-1
Sequence

ATGGCGGCAACATCGTTAATGTCTAGCATGGTTGATTCAGTCAAAGGGCATCCAGTTGTG
GCACAAGTTTTTGAGGGCGGAGAACCAGAATTATTTCTCTCGGTGTTCAAGTCACTAATC
ATATTCAAGGGGGGCAGGAGTGCTGCATATAAGAGTTCTGTTCTACAGAAAAGTCCGAGA
AATGGATGTCATGAGAGTGAAGGAGTCGCCCTATTCCGTGTTCAAGGGCTTAAACATTAT
TGTGTGCAGGCCATTCAAGTTGATCTGGTTGCAAGTTCACTTAATTCCTCGCACTGTTAT
ATTTTGCAAGACAACGGTTTGTTCCTTACTTGGTTAGGAGGCCTGTCTTCACCAAGCGAT
CATAATATACTTGACATGATCATGAGCAAGTTGTGTCCAATGGAACAGTCCTTGCTAGTC
AGAGAAGGCTCTGAACCAGATCACTTCTGGAAAGCTTTGGGAGGACGATCGGAGTACTCG
AAAGAAAAGCGTGTGAAAGGTTGGCCTGCAGATCCACATCTGTATGCTTGTAGATTTGAA
CAAGGTTTACTCAAGGTCAAGGAGGTATTCAGCTTCTGTAAGGATGACCTGGCAACTGAA
GAGACGTTGATTCTGGACTGCAATGAAGAAATCTACGTCTGGGTTGGCCTACACTCAGAT
ATTACATCCAAGGAGCAAGCTCTCAATGTTGGCAAGATGTTCCTTAAGGATGCTGTTCAC
GGTGGAAGGTCAATGGAAACGACAGTGTATGCTGTCACAGAAGGGGACGAGCCTGGATTT
TTCACCAGCTTCTTCGACTGGGACAATTCGAAGCAATCATATATGGTTGGCAACTCATTT
GAGAGGAAGCTCGCCGTCCTGAAAGGGGTCTCCCCAAAACTAGAGACACCGGACAGAAGC
CTGCGCAGGCCGTCTAGGAGGCCCGGGGTATCGTCGGAGCCGACCACGCCGGAGCACCAG
CAACCGACCGCGAGAAGGGCCTTCGGCTCCACGTCTGCCGGGCGGTTTGCCAGGGAGCGC
TCTCCGGCTGTTGCACCGCCAACGTTGTCGCCATCTCCCAAAAGCCGCTCGTCGTCGTCG
ACGCCCACCACGGTGGCACGACGGCTCTTTCCTGCCTCGGTGCACGCATCGGAGGCTGTG
CACGTGGTCTCCACGGCGACAGCTCGACGACGGTGA

Peptide Sequence

PEP ID

Zm00001d037497_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:6:127271263:127274672:1 gene:Zm00001d037497 transcript:Zm00001d037497_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Villin-1
Sequence

MAATSLMSSMVDSVKGHPVVAQVFEGGEPELFLSVFKSLIIFKGGRSAAYKSSVLQKSPR
NGCHESEGVALFRVQGLKHYCVQAIQVDLVASSLNSSHCYILQDNGLFLTWLGGLSSPSD
HNILDMIMSKLCPMEQSLLVREGSEPDHFWKALGGRSEYSKEKRVKGWPADPHLYACRFE
QGLLKVKEVFSFCKDDLATEETLILDCNEEIYVWVGLHSDITSKEQALNVGKMFLKDAVH
GGRSMETTVYAVTEGDEPGFFTSFFDWDNSKQSYMVGNSFERKLAVLKGVSPKLETPDRS
LRRPSRRPGVSSEPTTPEHQQPTARRAFGSTSAGRFARERSPAVAPPTLSPSPKSRSSSS
TPTTVARRLFPASVHASEAVHVVSTATARRR

Transcript Sequence

Transcript ID

Zm00001d037497_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:127271263:127274672:1 gene:Zm00001d037497 gene_biotype:protein_coding transcript_biotype:protein_coding description:Villin-1
Sequence

AGGCACACCCGTTGGATAGAGAAATGCTGAACTCAGACAGAAGTTACATGCTGGACTGCA
GCACTGAAATATTCTTATGGATGGGGATGACAACACTGGTTTCAGAGAGGAAGTCATCTG
TTGCTGTCTTGGAAGATTATGTGCACTCCCAAGGCAGGTCATTCAACGTTCACACATTTA
TAATGACAGAAGGCCATGAAACTGTTGACTTTAAGCTGCACTTTCAACACTGGTCCAGGA
ATGTTGAGCTAAAGTTATATGAGGCTGGCCGAGAGAAAGTGGCAGCTATTTTCAAGCATC
AGGGCTATGATGTCACAGAAATTCCTGAGGATAAACCTCAGCAGTTCATCAATTGTAATG
GCAGTCTGAAGGTTTGGTTGGTGGACCATGGTTGTACAAACCTTCTTAGTACTGAGGACC
AGGAAAAATTGTACACTGGAGACTGTTATATCATACGGTATAGCTATTTTGAAAATGGAA
AAAATTACCATCTGTTCTTTGCATGGTCTGGTAAGAATAGTGTAAAGGTACGTTCTTTGT
AACTCCATCCATGTAACCTATTGATATTTCAGAGAAAAGGCTGTTAAAACATGGCCTACA
AGATGATAGAATGGCGGCAACATCGTTAATGTCTAGCATGGTTGATTCAGTCAAAGGGCA
TCCAGTTGTGGCACAAGTTTTTGAGGGCGGAGAACCAGAATTATTTCTCTCGGTGTTCAA
GTCACTAATCATATTCAAGGGGGGCAGGAGTGCTGCATATAAGAGTTCTGTTCTACAGAA
AAGTCCGAGAAATGGATGTCATGAGAGTGAAGGAGTCGCCCTATTCCGTGTTCAAGGGCT
TAAACATTATTGTGTGCAGGCCATTCAAGTTGATCTGGTTGCAAGTTCACTTAATTCCTC
GCACTGTTATATTTTGCAAGACAACGGTTTGTTCCTTACTTGGTTAGGAGGCCTGTCTTC
ACCAAGCGATCATAATATACTTGACATGATCATGAGCAAGTTGTGTCCAATGGAACAGTC
CTTGCTAGTCAGAGAAGGCTCTGAACCAGATCACTTCTGGAAAGCTTTGGGAGGACGATC
GGAGTACTCGAAAGAAAAGCGTGTGAAAGGTTGGCCTGCAGATCCACATCTGTATGCTTG
TAGATTTGAACAAGGTTTACTCAAGGTCAAGGAGGTATTCAGCTTCTGTAAGGATGACCT
GGCAACTGAAGAGACGTTGATTCTGGACTGCAATGAAGAAATCTACGTCTGGGTTGGCCT
ACACTCAGATATTACATCCAAGGAGCAAGCTCTCAATGTTGGCAAGATGTTCCTTAAGGA
TGCTGTTCACGGTGGAAGGTCAATGGAAACGACAGTGTATGCTGTCACAGAAGGGGACGA
GCCTGGATTTTTCACCAGCTTCTTCGACTGGGACAATTCGAAGCAATCATATATGGTTGG
CAACTCATTTGAGAGGAAGCTCGCCGTCCTGAAAGGGGTCTCCCCAAAACTAGAGACACC
GGACAGAAGCCTGCGCAGGCCGTCTAGGAGGCCCGGGGTATCGTCGGAGCCGACCACGCC
GGAGCACCAGCAACCGACCGCGAGAAGGGCCTTCGGCTCCACGTCTGCCGGGCGGTTTGC
CAGGGAGCGCTCTCCGGCTGTTGCACCGCCAACGTTGTCGCCATCTCCCAAAAGCCGCTC
GTCGTCGTCGACGCCCACCACGGTGGCACGACGGCTCTTTCCTGCCTCGGTGCACGCATC
GGAGGCTGTGCACGTGGTCTCCACGGCGACAGCTCGACGACGGTGAGAGGAGAGGTGGCT
GTGTATGCATGCGTAATCGTGCACGATTGAAATCATGTAGAGTTGTACTAGACGATGGAT
TTATATGTCCGGCCTACGTACGTGTCTGTATACAGAATTTACCTCTCAAACTGTCAAACC
CCGAAAGTTTCTTGTTTTG