Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037480_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:126663869:126667210:-1 gene:Zm00001d037480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline alpha galactosidase 2

Sequence

ATGTCCGTGATGGCGCGGAGGCTGAGCTCCAGCTGCAGCAGGGCCGTCGCGTCCTCGTGC
CCTTCCAAATCTTCTCTGCGGCGCCGTATATATACCCTTCCTTCCCGCCCGCTGCTACTC
GCATTCTCGCTGCGGGCCTCGCCTCTGTGTCCGGCGCCGCCTCTCCCTCCTCCCACCCCG
CCTCGGTGTTCGTTTAGGACTCTCGCGGCGGCCAAGGAGTCGTCGCCGCCGTCGACCAGC
GTCTCGCCGACCCAGCAGCAGTCCCGGAGTACGATAGAGGGAGGCGAGATGACGGTCGCC
TCGTCCGTCAGGCTCGCCGGCGGCAATCTGACGGTATGCGGGCGGACGGTGCTGTCCGGG
GTGCCGGACGCGGTGGTGGCCACGTCGGCGGCGACGGAGGGAGCGGTCGACGGGATCTTC
CTCGGCGCCGACTTCGCCGAGCCGGCCGCCCGGCACGTCGTCTCCCTCGGCGACCTGAGG
GACGTTCGGTTCATGGCGTGCTTCCGATTCAAGCTATGGTGGATGGCGCAGCGGATGGGG
GAGAAAGGCAGCGACGTCCCGCGCGAGACCCAGTTCCTGCTCGTCGAGTCCAGGGGCGTC
GGCGACGAGGACGCGGCGTACGTCGTGTTCCTCCCGCTCGTGGAGGGCGCGTTCCGGGCC
AGCATCCAGGGCGGTGCCGGCGACGCGCTGGAGCTCTGCGTCGAGAGCGGGGACGACGAC
ACGCGCGCGGCGTCCTTCGAGCGATCCCTCTTCGTGGGCGCCGCGGAGTCCGACCCCTTC
GCGGCCATCTCCGGCGCAGTCGCCGCCGCCAAGTCCGCGCTCAGGACGTTCCGGGTCCGC
GCCGAGAAGAAGCTCCCGGGCATCGTCGACTACTTCGGCTGGTGCACCTGGGACGCCTTT
TACCAGGACGTCACCCAGGAGGGCGTCGAGGCCGGGCTCCGCAGCCTCATCGCCGGCGGC
GCGCCGCCCAAGTTCGTCATCATCGACGACGGCTGGCAGTCCGTCGCCACCGACACCAAC
GAATCGGCCGGAGAGGACAAGCCGCCCCTCCTATCTCGGCTCACCGGCATCAAGGAGAAC
AGCAAGTTCCAGAACGCGGACGACCCGGCCGCCGGCATCAAGACGGTGGTGCGCTTGGCG
AAGGAGGAGTACCGGCTCAAGTACGTCTACGTGTGGCACGCCATCACCGGCTACTGGGGC
GGCGTCCGGCCCGGCGAGGAGCACTACCGCTCCAGCATGCAGTTCCCCAAGGTTTCGCCG
GGCGTCATGGAGAACGAGCCCGGCATGAAGACCGACGTGCTCACCGTGCAGGGGCTCGGC
CTCGTGCACCCGCGCGCCGTGTACCGCTTCTACGACGAGCTCCACGCGTACCTCGCCGCC
GCCGGAGTCGACGGCGTCAAGGTGGACGTGCAGTGCATCCTGGAGACGCTCGGCGCCGGC
CACGGCGGCCGCGTGCAGCTCACCAGGCAGTACCACCAGGCGCTGGACGCCTCCGTCGCC
AAGAACTTCCCGGAGAACGGCATCATCGCCTGCATGAGCCACAACACCGACGCCCTTTAC
TGCTCCAAGCAGACGGCGGTGGTGAGGGCGTCGGATGATTTCTACCCAAGGGACCCCGCG
TCGCACACGATCCATATCGCCTCGGTGGCGTACAACAGCGTGTTCCTCGGCGAGTTCATG
CTCCCGGACTGGGACATGTTCCACTCGCTCCACCAGGCCGGCGACTACCACGGCTCCGCC
CGCGCCATCAGCGGAGGCCCTGTCTACGTCAGTGACGCACCCGGCAAGCACAACTTCGAG
CTGCTGAAGAAGATTGTCTTGCCCGACGGTTCCATTCTCCGCGCGCGTCTGCCTGGCCGG
CCGACCAAGGATTGCCTGTTCACGGACCCGGCACGGGACGGCGTAAGCCTGCTCAAGATC
TGGAACATGAACAAGTTCACCGGCGTGCTGGGCGTGTACAACTGCCAGGGCGCGGCGTGG
AACTCCGTGGAGAAGAAGAACACCTTCCACCAGACCGGCACCGAGGCCCTGACCTGCGGC
GTCAAGGGCGGCGACGTCCACCTCATCTCCGAGGCCGCGACGGACACCGAATGGGACGGC
GACTGCGCCATGTACCGGCATGCCGACGGCGACCTCGTCGTCCTCCCGCACGACGCGGCG
TTGCCCGTCTCCCTCAAGGTCCTGGAACATGACATCCTCACCGTGTCACCCATCAAGGAG
TTGGCGCCTGGTTTCAGGTTCGCCCCGATCGGGCTGGTGGACATGTTCAATAGCGGCGGG
GCGGTGGAAGGCCTGACCTATCACCTCCTCGGCGGCGACGGTTCCACCTTGGGCTCCGAG
GCTGTCGCATTGGCGTGCATGGAGGTGAAGGGCTGTGGAAGGTTCGGTGCCTACTCTTCG
GTCAGGCCAAGGAAGTCCACGCTCGGTTCAGCTCAGATTGAGCTCAAGTATGATTCTTCC
TCAGGGCTGCTGATTCTGCAGCTGGATGCGATGCCCAAGGAGAGGGTTCACAAGATTGTT
ATTGAGTTGTAG

Peptide Sequence

PEP ID

Zm00001d037480_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:126663869:126667210:-1 gene:Zm00001d037480 transcript:Zm00001d037480_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline alpha galactosidase 2

Sequence

MSVMARRLSSSCSRAVASSCPSKSSLRRRIYTLPSRPLLLAFSLRASPLCPAPPLPPPTP
PRCSFRTLAAAKESSPPSTSVSPTQQQSRSTIEGGEMTVASSVRLAGGNLTVCGRTVLSG
VPDAVVATSAATEGAVDGIFLGADFAEPAARHVVSLGDLRDVRFMACFRFKLWWMAQRMG
EKGSDVPRETQFLLVESRGVGDEDAAYVVFLPLVEGAFRASIQGGAGDALELCVESGDDD
TRAASFERSLFVGAAESDPFAAISGAVAAAKSALRTFRVRAEKKLPGIVDYFGWCTWDAF
YQDVTQEGVEAGLRSLIAGGAPPKFVIIDDGWQSVATDTNESAGEDKPPLLSRLTGIKEN
SKFQNADDPAAGIKTVVRLAKEEYRLKYVYVWHAITGYWGGVRPGEEHYRSSMQFPKVSP
GVMENEPGMKTDVLTVQGLGLVHPRAVYRFYDELHAYLAAAGVDGVKVDVQCILETLGAG
HGGRVQLTRQYHQALDASVAKNFPENGIIACMSHNTDALYCSKQTAVVRASDDFYPRDPA
SHTIHIASVAYNSVFLGEFMLPDWDMFHSLHQAGDYHGSARAISGGPVYVSDAPGKHNFE
LLKKIVLPDGSILRARLPGRPTKDCLFTDPARDGVSLLKIWNMNKFTGVLGVYNCQGAAW
NSVEKKNTFHQTGTEALTCGVKGGDVHLISEAATDTEWDGDCAMYRHADGDLVVLPHDAA
LPVSLKVLEHDILTVSPIKELAPGFRFAPIGLVDMFNSGGAVEGLTYHLLGGDGSTLGSE
AVALACMEVKGCGRFGAYSSVRPRKSTLGSAQIELKYDSSSGLLILQLDAMPKERVHKIV
IEL

Transcript Sequence

Transcript ID

Zm00001d037480_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:126663869:126667210:-1 gene:Zm00001d037480 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alkaline alpha galactosidase 2

Sequence

GCCGCCGATGTCCGTGATGGCGCGGAGGCTGAGCTCCAGCTGCAGCAGGGCCGTCGCGTC
CTCGTGCCCTTCCAAATCTTCTCTGCGGCGCCGTATATATACCCTTCCTTCCCGCCCGCT
GCTACTCGCATTCTCGCTGCGGGCCTCGCCTCTGTGTCCGGCGCCGCCTCTCCCTCCTCC
CACCCCGCCTCGGTGTTCGTTTAGGACTCTCGCGGCGGCCAAGGAGTCGTCGCCGCCGTC
GACCAGCGTCTCGCCGACCCAGCAGCAGTCCCGGAGTACGATAGAGGGAGGCGAGATGAC
GGTCGCCTCGTCCGTCAGGCTCGCCGGCGGCAATCTGACGGTATGCGGGCGGACGGTGCT
GTCCGGGGTGCCGGACGCGGTGGTGGCCACGTCGGCGGCGACGGAGGGAGCGGTCGACGG
GATCTTCCTCGGCGCCGACTTCGCCGAGCCGGCCGCCCGGCACGTCGTCTCCCTCGGCGA
CCTGAGGGACGTTCGGTTCATGGCGTGCTTCCGATTCAAGCTATGGTGGATGGCGCAGCG
GATGGGGGAGAAAGGCAGCGACGTCCCGCGCGAGACCCAGTTCCTGCTCGTCGAGTCCAG
GGGCGTCGGCGACGAGGACGCGGCGTACGTCGTGTTCCTCCCGCTCGTGGAGGGCGCGTT
CCGGGCCAGCATCCAGGGCGGTGCCGGCGACGCGCTGGAGCTCTGCGTCGAGAGCGGGGA
CGACGACACGCGCGCGGCGTCCTTCGAGCGATCCCTCTTCGTGGGCGCCGCGGAGTCCGA
CCCCTTCGCGGCCATCTCCGGCGCAGTCGCCGCCGCCAAGTCCGCGCTCAGGACGTTCCG
GGTCCGCGCCGAGAAGAAGCTCCCGGGCATCGTCGACTACTTCGGCTGGTGCACCTGGGA
CGCCTTTTACCAGGACGTCACCCAGGAGGGCGTCGAGGCCGGGCTCCGCAGCCTCATCGC
CGGCGGCGCGCCGCCCAAGTTCGTCATCATCGACGACGGCTGGCAGTCCGTCGCCACCGA
CACCAACGAATCGGCCGGAGAGGACAAGCCGCCCCTCCTATCTCGGCTCACCGGCATCAA
GGAGAACAGCAAGTTCCAGAACGCGGACGACCCGGCCGCCGGCATCAAGACGGTGGTGCG
CTTGGCGAAGGAGGAGTACCGGCTCAAGTACGTCTACGTGTGGCACGCCATCACCGGCTA
CTGGGGCGGCGTCCGGCCCGGCGAGGAGCACTACCGCTCCAGCATGCAGTTCCCCAAGGT
TTCGCCGGGCGTCATGGAGAACGAGCCCGGCATGAAGACCGACGTGCTCACCGTGCAGGG
GCTCGGCCTCGTGCACCCGCGCGCCGTGTACCGCTTCTACGACGAGCTCCACGCGTACCT
CGCCGCCGCCGGAGTCGACGGCGTCAAGGTGGACGTGCAGTGCATCCTGGAGACGCTCGG
CGCCGGCCACGGCGGCCGCGTGCAGCTCACCAGGCAGTACCACCAGGCGCTGGACGCCTC
CGTCGCCAAGAACTTCCCGGAGAACGGCATCATCGCCTGCATGAGCCACAACACCGACGC
CCTTTACTGCTCCAAGCAGACGGCGGTGGTGAGGGCGTCGGATGATTTCTACCCAAGGGA
CCCCGCGTCGCACACGATCCATATCGCCTCGGTGGCGTACAACAGCGTGTTCCTCGGCGA
GTTCATGCTCCCGGACTGGGACATGTTCCACTCGCTCCACCAGGCCGGCGACTACCACGG
CTCCGCCCGCGCCATCAGCGGAGGCCCTGTCTACGTCAGTGACGCACCCGGCAAGCACAA
CTTCGAGCTGCTGAAGAAGATTGTCTTGCCCGACGGTTCCATTCTCCGCGCGCGTCTGCC
TGGCCGGCCGACCAAGGATTGCCTGTTCACGGACCCGGCACGGGACGGCGTAAGCCTGCT
CAAGATCTGGAACATGAACAAGTTCACCGGCGTGCTGGGCGTGTACAACTGCCAGGGCGC
GGCGTGGAACTCCGTGGAGAAGAAGAACACCTTCCACCAGACCGGCACCGAGGCCCTGAC
CTGCGGCGTCAAGGGCGGCGACGTCCACCTCATCTCCGAGGCCGCGACGGACACCGAATG
GGACGGCGACTGCGCCATGTACCGGCATGCCGACGGCGACCTCGTCGTCCTCCCGCACGA
CGCGGCGTTGCCCGTCTCCCTCAAGGTCCTGGAACATGACATCCTCACCGTGTCACCCAT
CAAGGAGTTGGCGCCTGGTTTCAGGTTCGCCCCGATCGGGCTGGTGGACATGTTCAATAG
CGGCGGGGCGGTGGAAGGCCTGACCTATCACCTCCTCGGCGGCGACGGTTCCACCTTGGG
CTCCGAGGCTGTCGCATTGGCGTGCATGGAGGTGAAGGGCTGTGGAAGGTTCGGTGCCTA
CTCTTCGGTCAGGCCAAGGAAGTCCACGCTCGGTTCAGCTCAGATTGAGCTCAAGTATGA
TTCTTCCTCAGGGCTGCTGATTCTGCAGCTGGATGCGATGCCCAAGGAGAGGGTTCACAA
GATTGTTATTGAGTTGTAGGGTGGTACAAAGATTTAGTTTCATTGGTAATCAGAGTACCC
TCTGATGACGAGTATGTAGGGACTGGAGTGGCGTATGGTTTGATTGATAGGCAAATCTGA
TTCATGATTCAAGCTTGTCTGGACTATGAACAGCTGGCCTTCAGTATTTGATTACATTCA
TTCAAACACCCGTTTCCAAATGTTCAGTATTGTTACCG