Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037465_T025
CDS Infomation

cds chromosome:B73_RefGen_v4:6:126142493:126151537:-1 gene:Zm00001d037465 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipid-transporting ATPase 9
Sequence

ATGGCGCCGACGAAGAGGCTGGAGAAACTTAAGCTCAGCACATTGTTGACTTTCATGCGT
TGTCACGGGGGCTCTAGTGATGACCACTTACGGATTGGGACAGTGGGGTTCTCCAGAGTC
GTGTACGTCAATGAGCCTGATAGGCTTGAAGAGGAGGGATTCAGTTACCTGCTGAATGAG
GTGTCGACGACAAAGTACAATCTGGCCACCTTCCTGCCCAAGTCCCTCTTCGAGCAGTTC
AGGAGGGTGGCCAATTTCTACTTCCTTGTCTCTGGTATCCTTGCCTTGACTCCACTTGCA
CCATACACGGCAGTGAGCGCGCTTGCGCCGCTGTGTGTCGTGATTGTAGCCACCATGGCA
AAAGAAGGGGTTGAGGACTGGCGGAGGAAACAACAGGATCACGAGCTTAACAATCGGATA
GTCAAAGTGCATAGGGGGAATGGTCATTTTGAAGAGTCAAAATGGAAGAATATCAAAGTT
GGAGATGTAATAAAGGTGGAGAAGGATAATTTCTTCCCCGCTGATATGATTCTGCTTTCA
TCTAACTATCCGGATGGAATCTGTTATGTAGAGACCATGAACCTCGATGGTGAAACAAAT
TTGAAAATTAAACAAGCTCTCAAGGTGACATTGGATTTACATGAGGACATAAAGTTCAGG
GAAGTCAGACAAACAATAAAATGCGAAGACCCAAATGCGAACCTCTACTCCTTTGTCGGT
TCAATGGAATGGAGAGGCCAGCAGTATCCCCTGTCATCCCTACAGCTTCTTCTTCGAGAC
TCAAAACTACGGAACACTGACTACATATATGGGGCTGTCATCTTCACAGGCCATGATACA
AAAGTGATGCAAAATGCAACTGATCCACCATCTAAAAGAAGTAAGGTTGAGAAGAAAATG
GATCAAATTATTTATCTTCTAATGTCTTCTCTACTCATGATTGCATTACTTGGTTCTGTC
TTCTTTGGGATCTGGACCAAAGAGGACCTAAGAGATGGTGAGCTCAAACGGTGGTATCTT
CGGCCAGATGCTACTACCATATTCTATGATCCAAAGAGAGCAGCTCTGGCATCTTTCTTT
CATTTGTTGACGTCCTTGATGCTGTACAGCTACTTCATACCCATTTCTTTGTATATATCC
ATCGAGATGGTCAAGATCTTGCAAGCTCTATTCATCAACCAGGATATTCGAATGTATCAT
GAAGAATCAGATAAGCCAACTCATGCTCGTACTTCAAATCTAAATGAAGAACTGGGTATG
GTTGATACAATTCTATCGGATAAGACTGGAACATTGACGTGCAACATGATGGAGTTCATC
AAGTGTTCAATTGCTGGAACTGCCTATGGTCAAGGCGTCACTGAAGTTGAGAGAGCTATG
GCTATGAGGAAAGGTGCTAGGTTAGATGATGACATTGAAAATGGAGACCACAAAGACAAA
AAAAATGACAACAGTCCCCATGTTAAAGGGTTCAATTTCAAGGATCAACGAATAATGGAT
GGGAAATGGGTTCATGAGCCTAACAGAGTTATGATAAGAGATTTTTTCCGGCTCCTAGCC
ATCTGCCACACATGCATTGCTGAAATAGATGAAAATGAGAAGGTTTCATATGAAGCTGAG
TCCCCTGATGAAGCTGCATTTGTTATTGCAGCAAGAGAACTAGGGTTTGAGTTTTACAAG
AGGTCGCTAGCAACTATAATTGTTCGTGAACGGAATCCAAGTCAGAATGTTGTTGAGAAA
AGAAAGTATGAACTCCTAAATATGTTGGAGTTCAGTAGCTCAAGGAGTCGGATGTCTGTG
ATAGTGAAGGAACCAGAGGGAAGAATATTACTTCTCAGCAAGGGTGCAGACAGTGTGATG
TTCAAAAGGCTTGCACCAATTGGAAGAAAATTTGAAGAAGAAACAAGAAGTCACATAAAT
CAGTATTCTGACTCTGGTCTAAGAACCTTTGTTCTGGCATACCGTGTCTTAGATGAGAAA
GAGTACAAGGAATTCAATGAAAAATTGAACGCTGCCAAAGCATCTGTAAGTGCTGATAAA
GATGAAAAAATTGAGCAGGTTGCTGATAGCATTGAACGGGACTTGATTCTTCTTGGTGCT
ACCGCAGTTGAAGATAAACTTCAACAAGGGGTGCCTGAATGCATAGACAAGCTTGCACAA
GCCGGAATTAAGATGTGGGTCCTGACAGGCGATAAGCTGGAGACAGCTATCAATATTGGG
TTTGCTTGTAGCCTTCTTAGACAAGGCATGACACAGATAATCGTCACACTGGAACAACCT
GATATCATCGCATTGGAGAAAAATGGTGACAAACCAAAAATTGCTAAGGCATCAAAGCAA
CGGGTTATGGGTCAGATAGAGGATGGAATCAAACAAATTCCACCTTCAACTCAAATTAGC
ACTGCATCATTCGCGCTAATCATTGATGGTAAATCACTAACTTATGCTTTGGAAGATGAT
GTTAAGTTTAAGTTCTTGGATCTTGCTCTCAAGTGTGCATCAGTGATATGTTGCCGATCT
TCACCAAAACAGAAGGCACTGGTTACAAGACTTGTTAAAGAAGTAACACATAAAGTGACT
TTAGCAATAGGTGATGGGGCAAATGATGTTGGCATGCTTCAAGAAGCTGACATAGGGGTT
GGCATCAGTGGTGCTGAAGGAATGCAGGGCTGTCATGGCTAG

Peptide Sequence

PEP ID

Zm00001d037465_P025
PEP Infomation

pep chromosome:B73_RefGen_v4:6:126142493:126151537:-1 gene:Zm00001d037465 transcript:Zm00001d037465_T025 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipid-transporting ATPase 9
Sequence

MAPTKRLEKLKLSTLLTFMRCHGGSSDDHLRIGTVGFSRVVYVNEPDRLEEEGFSYLLNE
VSTTKYNLATFLPKSLFEQFRRVANFYFLVSGILALTPLAPYTAVSALAPLCVVIVATMA
KEGVEDWRRKQQDHELNNRIVKVHRGNGHFEESKWKNIKVGDVIKVEKDNFFPADMILLS
SNYPDGICYVETMNLDGETNLKIKQALKVTLDLHEDIKFREVRQTIKCEDPNANLYSFVG
SMEWRGQQYPLSSLQLLLRDSKLRNTDYIYGAVIFTGHDTKVMQNATDPPSKRSKVEKKM
DQIIYLLMSSLLMIALLGSVFFGIWTKEDLRDGELKRWYLRPDATTIFYDPKRAALASFF
HLLTSLMLYSYFIPISLYISIEMVKILQALFINQDIRMYHEESDKPTHARTSNLNEELGM
VDTILSDKTGTLTCNMMEFIKCSIAGTAYGQGVTEVERAMAMRKGARLDDDIENGDHKDK
KNDNSPHVKGFNFKDQRIMDGKWVHEPNRVMIRDFFRLLAICHTCIAEIDENEKVSYEAE
SPDEAAFVIAARELGFEFYKRSLATIIVRERNPSQNVVEKRKYELLNMLEFSSSRSRMSV
IVKEPEGRILLLSKGADSVMFKRLAPIGRKFEEETRSHINQYSDSGLRTFVLAYRVLDEK
EYKEFNEKLNAAKASVSADKDEKIEQVADSIERDLILLGATAVEDKLQQGVPECIDKLAQ
AGIKMWVLTGDKLETAINIGFACSLLRQGMTQIIVTLEQPDIIALEKNGDKPKIAKASKQ
RVMGQIEDGIKQIPPSTQISTASFALIIDGKSLTYALEDDVKFKFLDLALKCASVICCRS
SPKQKALVTRLVKEVTHKVTLAIGDGANDVGMLQEADIGVGISGAEGMQGCHG

Transcript Sequence

Transcript ID

Zm00001d037465_T025
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:126142493:126151537:-1 gene:Zm00001d037465 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative phospholipid-transporting ATPase 9
Sequence

GAGGACGGGGTTCCGGAGCGCAGGGCCGCGGCGGCACGCCGGGATTTCAGAGGCGCCGCG
CTGTTGAGTGTTGACGTCTTCTCGATCCTGGGAGGAGCTGATTTCTCTGCTGAGGGCCTG
GGGTGGCTCTCGGTTCAGTCCCTCTCCCTGTGCAGTTTATTTGCTTTTTTTAGGTAGTTG
GGGGCTACTTGTTGGTTGGGAGAGGAGCTGAATTATTGCGAGCTGCATTCTTGGAGATTC
TTGCTGCTCGAATCTCAGCTGCTCTTCTTCAGAGGGAATTGCCAATTGCGTTCTGCAGTA
AGATTGATTTGGACAAGGTTGGAGCGAATTGGCTGCTACGGCGGGGAGTTCCAAAAAAAA
CCCGTGAGGTTTTGGCCTTGTCGACTTCTTGGGGCATCTGGGAGTAGCTTTGGTGCAGTG
ATTCACTTGAGTCTGGAGGAATGGCGCCGACGAAGAGGCTGGAGAAACTTAAGCTCAGCA
CATTGTTGACTTTCATGCGTTGTCACGGGGGCTCTAGTGATGACCACTTACGGATTGGGA
CAGTGGGGTTCTCCAGAGTCGTGTACGTCAATGAGCCTGATAGGCTTGAAGAGGAGGGAT
TCAGTTACCTGCTGAATGAGGTGTCGACGACAAAGTACAATCTGGCCACCTTCCTGCCCA
AGTCCCTCTTCGAGCAGTTCAGGAGGGTGGCCAATTTCTACTTCCTTGTCTCTGGTATCC
TTGCCTTGACTCCACTTGCACCATACACGGCAGTGAGCGCGCTTGCGCCGCTGTGTGTCG
TGATTGTAGCCACCATGGCAAAAGAAGGGGTTGAGGACTGGCGGAGGAAACAACAGGATC
ACGAGCTTAACAATCGGATAGTCAAAGTGCATAGGGGGAATGGTCATTTTGAAGAGTCAA
AATGGAAGAATATCAAAGTTGGAGATGTAATAAAGGTGGAGAAGGATAATTTCTTCCCCG
CTGATATGATTCTGCTTTCATCTAACTATCCGGATGGAATCTGTTATGTAGAGACCATGA
ACCTCGATGGTGAAACAAATTTGAAAATTAAACAAGCTCTCAAGGTGACATTGGATTTAC
ATGAGGACATAAAGTTCAGGGAAGTCAGACAAACAATAAAATGCGAAGACCCAAATGCGA
ACCTCTACTCCTTTGTCGGTTCAATGGAATGGAGAGGCCAGCAGTATCCCCTGTCATCCC
TACAGCTTCTTCTTCGAGACTCAAAACTACGGAACACTGACTACATATATGGGGCTGTCA
TCTTCACAGGCCATGATACAAAAGTGATGCAAAATGCAACTGATCCACCATCTAAAAGAA
GTAAGGTTGAGAAGAAAATGGATCAAATTATTTATCTTCTAATGTCTTCTCTACTCATGA
TTGCATTACTTGGTTCTGTCTTCTTTGGGATCTGGACCAAAGAGGACCTAAGAGATGGTG
AGCTCAAACGGTGGTATCTTCGGCCAGATGCTACTACCATATTCTATGATCCAAAGAGAG
CAGCTCTGGCATCTTTCTTTCATTTGTTGACGTCCTTGATGCTGTACAGCTACTTCATAC
CCATTTCTTTGTATATATCCATCGAGATGGTCAAGATCTTGCAAGCTCTATTCATCAACC
AGGATATTCGAATGTATCATGAAGAATCAGATAAGCCAACTCATGCTCGTACTTCAAATC
TAAATGAAGAACTGGGTATGGTTGATACAATTCTATCGGATAAGACTGGAACATTGACGT
GCAACATGATGGAGTTCATCAAGTGTTCAATTGCTGGAACTGCCTATGGTCAAGGCGTCA
CTGAAGTTGAGAGAGCTATGGCTATGAGGAAAGGTGCTAGGTTAGATGATGACATTGAAA
ATGGAGACCACAAAGACAAAAAAAATGACAACAGTCCCCATGTTAAAGGGTTCAATTTCA
AGGATCAACGAATAATGGATGGGAAATGGGTTCATGAGCCTAACAGAGTTATGATAAGAG
ATTTTTTCCGGCTCCTAGCCATCTGCCACACATGCATTGCTGAAATAGATGAAAATGAGA
AGGTTTCATATGAAGCTGAGTCCCCTGATGAAGCTGCATTTGTTATTGCAGCAAGAGAAC
TAGGGTTTGAGTTTTACAAGAGGTCGCTAGCAACTATAATTGTTCGTGAACGGAATCCAA
GTCAGAATGTTGTTGAGAAAAGAAAGTATGAACTCCTAAATATGTTGGAGTTCAGTAGCT
CAAGGAGTCGGATGTCTGTGATAGTGAAGGAACCAGAGGGAAGAATATTACTTCTCAGCA
AGGGTGCAGACAGTGTGATGTTCAAAAGGCTTGCACCAATTGGAAGAAAATTTGAAGAAG
AAACAAGAAGTCACATAAATCAGTATTCTGACTCTGGTCTAAGAACCTTTGTTCTGGCAT
ACCGTGTCTTAGATGAGAAAGAGTACAAGGAATTCAATGAAAAATTGAACGCTGCCAAAG
CATCTGTAAGTGCTGATAAAGATGAAAAAATTGAGCAGGTTGCTGATAGCATTGAACGGG
ACTTGATTCTTCTTGGTGCTACCGCAGTTGAAGATAAACTTCAACAAGGGGTGCCTGAAT
GCATAGACAAGCTTGCACAAGCCGGAATTAAGATGTGGGTCCTGACAGGCGATAAGCTGG
AGACAGCTATCAATATTGGGTTTGCTTGTAGCCTTCTTAGACAAGGCATGACACAGATAA
TCGTCACACTGGAACAACCTGATATCATCGCATTGGAGAAAAATGGTGACAAACCAAAAA
TTGCTAAGGCATCAAAGCAACGGGTTATGGGTCAGATAGAGGATGGAATCAAACAAATTC
CACCTTCAACTCAAATTAGCACTGCATCATTCGCGCTAATCATTGATGGTAAATCACTAA
CTTATGCTTTGGAAGATGATGTTAAGTTTAAGTTCTTGGATCTTGCTCTCAAGTGTGCAT
CAGTGATATGTTGCCGATCTTCACCAAAACAGAAGGCACTGGTTACAAGACTTGTTAAAG
AAGTAACACATAAAGTGACTTTAGCAATAGGTGATGGGGCAAATGATGTTGGCATGCTTC
AAGAAGCTGACATAGGGGTTGGCATCAGTGGTGCTGAAGGAATGCAGGGCTGTCATGGCT
AGTGATGTTGCTGTTGCCCAATTCCGCTTCTTGGAACGGCTACTTCTGGTGCATGGACAT
TGGTGTTACCGGCGTATTTCACTGATGATATGCTATTTCTTCTACAAGAATGTTACTTTT
GGTGTAACTATCTTTCTGTACGAAGCATTTGCATCTTTCTCCGGGAAGCCAGCTTATAAT
GATTGGTTCTTGTCACTATATAATGTTTTCTTCACCTCCCTTCCTGTCATTGCTCTGGGG
GTATTTGACCAGGATGTGTCTGCTAGGCTGTGCATACAGTATCCACAGCTATACCAAGAA
GGAGTGCAAAATATATTATTCAGTTGGCGTCGGATACTTGGCTGGATGTTTAATGGTGTT
ATGAATGCTGTCTTAATCTTTTTCTTCTGCATCACTGCCTTCGAGGACCAGGCATTCCGT
CGCGACGGTCAAGTTGCGGGCTTGGATGCTCTTGGTGTCGTCATGTACACTTGTATTGTA
TGGGTTGTTAACTGTCAAATGGCGCTCTCTGTGAACTACTTCACCATAATCCAGCACATA
T