Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037446_T010
CDS Infomation

cds chromosome:B73_RefGen_v4:6:125606380:125618743:1 gene:Zm00001d037446 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein decapping 5
Sequence

ATGGCGGCGGCGGCAGCAGCGGCAGCTGCAGCGCCTGAGTCGTACATCGGGAGCTTGATA
AGCCTCATGTCGAAGAGCGAGATCCGGTACGAGGGCGTCCTGTACACCATCAACACCGAG
GAGTCCAGCATCGGGCTAAAAAACGTTCGCTCATTTGGAACTGAAGGTCGTAAGAAGGAT
GGCCAACAGATTCCTGCCAGCGACAAGATATATGAGTACATACTCTTTCGAGGAAGTGAT
ATAAAGGATTTGCAAGTCAAATCATCTCCACCATCTCAGTCGGCAACTTTACACAATGAT
CCTGCTATTATTCAGTCACATTATCCTCATCCAGCTTCGCTTTCTACAAGTTTGCCTTCT
GCTGCAAGCACAATAGGAGCCAACCCTACTTCACAGAATGCTCCATCTTTGATTCAGATG
CCACCGCCATTTCAAGGGAATTTGCCCCCTTACCAGTCTGGCACCAGCTTACAGTCATGG
AACTCAGCACCTATGCCATCATCTGCAAATGGCACTGGCCTTACAATGCCACCAATGTAC
TGGCCAGGATATTACACACCACCAACTGGGTTTTCTCATCTGCAGCCACCACTCTTCCTT
AGGCCACCCCACAGTTTGGCTGTTCCACAGGTCCTGCAGCTTCCTGTACAATATCCTGGA
CTTGGATCTTTACCTGCTGGATTTCCAAATATGCCGGAGCTTCCTTCTTTCCTTCAACCT
GGTAACAGTAATAGTTTAAATCAAACTTCAGGTGTACCTACATCTGTGTCAACGCCTGCT
TCATTGAGTACATCACAAACTGAATCATCAAGAAGCCAACTGCCAAATAAGTTTTCATCT
GATTCAGCTTCTGTATTTTCTGTGGGTTTTACTCCTCCATCTGTGACTCCTTCAGTTTCG
ACAGTTGAACCTTCCATTCCTGTGTCAGCAGTCTTGCCTTCTCTGGTGAACAGTAAGCCA
GTAGCTCTACCTGACTCCACCATGCCATCTCTCTCCACTGCCAAGCCTGTGATTGTACCT
GATGCTTCAGTGCTTACCTATCTATCATCTCAGCCACCATCTGCTAATGATGTTTCTCCA
GTCAATGCTGCGGAGCAGGTTCCATTGGTAACCCCTGGGCAACTTCTGTCAACTACTTCC
TCTACAATTATATCATCTCATGCCTTGCAAACTGCTTCTGCTGTGGATCTATCCTCTAAG
GCTGCCCCCTCTACAGTTCCATCTTCTCAGGCTACATTGTTTGAAGGTTCAACCACACAG
GTTGCCTCCTCTTCTATTTTGTCACAACAGGTGGCAATGACAAATGAAAGTAAAGTAGCC
AAGCAGCGTGAGTGGAAGGCAAAACAAACTGTGGTTGGTAGACCCGGAAATAAGGAGCCC
CTATTGCCTGAACCAAAGTCGGTGTTTCAAAAGCCTGTAGGAGTTTCCTCATATGTCCGG
TACAACAGTAGAGGTCGCGGAAGAGGAAGAGGCCGTGGGGTATGCTTTTCTGAAAACATG
TTTTGTCCTACTAACTTTGAAAATCAAGAAGTTTTTGAGATGTGA

Peptide Sequence

PEP ID

Zm00001d037446_P010
PEP Infomation

pep chromosome:B73_RefGen_v4:6:125606380:125618743:1 gene:Zm00001d037446 transcript:Zm00001d037446_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein decapping 5
Sequence

MAAAAAAAAAAPESYIGSLISLMSKSEIRYEGVLYTINTEESSIGLKNVRSFGTEGRKKD
GQQIPASDKIYEYILFRGSDIKDLQVKSSPPSQSATLHNDPAIIQSHYPHPASLSTSLPS
AASTIGANPTSQNAPSLIQMPPPFQGNLPPYQSGTSLQSWNSAPMPSSANGTGLTMPPMY
WPGYYTPPTGFSHLQPPLFLRPPHSLAVPQVLQLPVQYPGLGSLPAGFPNMPELPSFLQP
GNSNSLNQTSGVPTSVSTPASLSTSQTESSRSQLPNKFSSDSASVFSVGFTPPSVTPSVS
TVEPSIPVSAVLPSLVNSKPVALPDSTMPSLSTAKPVIVPDASVLTYLSSQPPSANDVSP
VNAAEQVPLVTPGQLLSTTSSTIISSHALQTASAVDLSSKAAPSTVPSSQATLFEGSTTQ
VASSSILSQQVAMTNESKVAKQREWKAKQTVVGRPGNKEPLLPEPKSVFQKPVGVSSYVR
YNSRGRGRGRGRGVCFSENMFCPTNFENQEVFEM

Transcript Sequence

Transcript ID

Zm00001d037446_T010
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:125606380:125618743:1 gene:Zm00001d037446 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein decapping 5
Sequence

GAGAGAAAAAAAACTGCGGAGAGGTAGCGGTGGATCGAAACCCTAGGCGCGGTCGGCGGC
GATGGCGGCGGCGGCAGCAGCGGCAGCTGCAGCGCCTGAGTCGTACATCGGGAGCTTGAT
AAGCCTCATGTCGAAGAGCGAGATCCGGTACGAGGGCGTCCTGTACACCATCAACACCGA
GGAGTCCAGCATCGGGCTAAAAAACGTTCGCTCATTTGGAACTGAAGGTCGTAAGAAGGA
TGGCCAACAGATTCCTGCCAGCGACAAGATATATGAGTACATACTCTTTCGAGGAAGTGA
TATAAAGGATTTGCAAGTCAAATCATCTCCACCATCTCAGTCGGCAACTTTACACAATGA
TCCTGCTATTATTCAGTCACATTATCCTCATCCAGCTTCGCTTTCTACAAGTTTGCCTTC
TGCTGCAAGCACAATAGGAGCCAACCCTACTTCACAGAATGCTCCATCTTTGATTCAGAT
GCCACCGCCATTTCAAGGGAATTTGCCCCCTTACCAGTCTGGCACCAGCTTACAGTCATG
GAACTCAGCACCTATGCCATCATCTGCAAATGGCACTGGCCTTACAATGCCACCAATGTA
CTGGCCAGGATATTACACACCACCAACTGGGTTTTCTCATCTGCAGCCACCACTCTTCCT
TAGGCCACCCCACAGTTTGGCTGTTCCACAGGTCCTGCAGCTTCCTGTACAATATCCTGG
ACTTGGATCTTTACCTGCTGGATTTCCAAATATGCCGGAGCTTCCTTCTTTCCTTCAACC
TGGTAACAGTAATAGTTTAAATCAAACTTCAGGTGTACCTACATCTGTGTCAACGCCTGC
TTCATTGAGTACATCACAAACTGAATCATCAAGAAGCCAACTGCCAAATAAGTTTTCATC
TGATTCAGCTTCTGTATTTTCTGTGGGTTTTACTCCTCCATCTGTGACTCCTTCAGTTTC
GACAGTTGAACCTTCCATTCCTGTGTCAGCAGTCTTGCCTTCTCTGGTGAACAGTAAGCC
AGTAGCTCTACCTGACTCCACCATGCCATCTCTCTCCACTGCCAAGCCTGTGATTGTACC
TGATGCTTCAGTGCTTACCTATCTATCATCTCAGCCACCATCTGCTAATGATGTTTCTCC
AGTCAATGCTGCGGAGCAGGTTCCATTGGTAACCCCTGGGCAACTTCTGTCAACTACTTC
CTCTACAATTATATCATCTCATGCCTTGCAAACTGCTTCTGCTGTGGATCTATCCTCTAA
GGCTGCCCCCTCTACAGTTCCATCTTCTCAGGCTACATTGTTTGAAGGTTCAACCACACA
GGTTGCCTCCTCTTCTATTTTGTCACAACAGGTGGCAATGACAAATGAAAGTAAAGTAGC
CAAGCAGCGTGAGTGGAAGGCAAAACAAACTGTGGTTGGTAGACCCGGAAATAAGGAGCC
CCTATTGCCTGAACCAAAGTCGGTGTTTCAAAAGCCTGTAGGAGTTTCCTCATATGTCCG
GTACAACAGTAGAGGTCGCGGAAGAGGAAGAGGCCGTGGGGTATGCTTTTCTGAAAACAT
GTTTTGTCCTACTAACTTTGAAAATCAAGAAGTTTTTGAGATGTGAGATTGCTCTGTTTA
TATTCTGTCATGGCTGATACCTGAGCATGACCATGGCGGAGGGACAGGAGGCTAGACGCG
GGTGTGGCTGCTGGGTAACGCTGATTTGATTGTGTCGGCATTAGTATGTGGGCTGTCGGA
GCGTGTGTGCATGGGCCGTTGTGGTGGGCTGGCCTAGTTGGGTGCCTATATAGTCTGGTG
TGCTGTATCAGAGAAGAGGATTGAATAACAGAAATCTGAAATCCACATACCTGTGTGCGC
GTACCTGTTCTTCTTTGGTGAGGAGAGAGAGCTCACGTACTGGCTGTTCCGCTAGGTCCA
GGGGCCATTACAGTGGTATCAGAGCTCTGCGGTCCTCGGTGGCTCATCACGACGGCACCC
CGGTGAAACAGTCGACGCAGAAAAAGTTTCTACTCTCGGCCATGGCGACTTCAAAGCAGA
AGGGGAATGATCAGTGGGAGAAGATGATGAAGGGATTGGACTGGTTGGAAGAGAGACTGC
AGGTGATGGAGTCGGGTCAGTATCGAGTATCGACTCCAAGAGCAGGCGGACCGCGCGGCC
GCGACAACAAGGAAGGCGGAGGAGGAATGCAAGCAAGAGGAGGAGGATCGTGCGGTGATG
GCAGCCTTGGATGGGCTGATCGGTAAACTGGAGGCAAGGCAAGGGACGAAGCAATCAAGT
CGTCCTTGCAATCTGGGGCGATCAGACATGGTTGCAATCGTGAGCAGGAAATGTACTAAT
CTGGTTGGGGAGGTCGATACTACGTGCAAGCCGGCAATACTTGAAGCACAAGCATGGTCC
CAGAGTGATGCCCAAGAGGTATTTGATGCAATTCCTAGTCAGATTTTGTGGGATGATGAG
GTGCTGCAAGGTTTTGAATCACATGTCGGTTTACCGAAGGTTTTAGATCATGGTGATTGT
TGGGTTGGCAAGGCAGCCATAGACAATGATCTATGTGGCACGACAGTGTGGGATGAGGAA
ATTTCTTACGACTCAATCTGGCATGAGGGTTTGTTACAACAGCTAGCATCGTGCCGCAAG
AGCACTGATGATACTTCAAGACAAACTGCTCAGGTAGCTCAAGGGCTTGATACTCAGATG
CATGTCAATGGGTTGTAGTGGAGGCACCGGTCGCATCTGAAGGTGCTGTTATGGAGGTGT
TCAGTGAAACATATCTTGTGGATGTAATTTGGGATCAGGAATCACAACATGGCCATGACT
TGGATGGATTATTGTTGTTGCTTGCACACGGTGATCTAGAGATGATGATTTTGGTTGATG
CCTATGTGGTCAACGCCGACAAGGTATCCACACTTCCTGATGGCTTGTCAATTCCTTGTG
AGCTTGAGGAATGCGAGGAGATGCCACTTGCACTAGAATCAAACAAGTTAGTGCAGCAAT
CGACGTGATACAAAGTCTTGAAAAAAAACACACCTCCGGCCTCGGCATAGGAAGGATTTT
TACTGGGAGAAGAAAAATCCTAAGGTGGATTTGGGCGGCAATAATATGCCAACAAATGTT
AATGATTTTCTTGGGGAACATGGTGGCATGGTGGATATAATGTTCAGTTCTGATCCTGGC
TTGCCGCTATTTGGGTACTTTACTGGGCAAATATTCGAGGAAATGAGTGGCGTAAGGATT
GGAATGGAAGAGTTAAGGGTCATGATGACTTACTGCCTAAGTATTCATGGAGATGGTTTT
ATGAAGCTTCCAACATGGAGTTCCAGGAGCTATCACATTTCTGATGCAGAAACAAATGAA
CCACTATTGTTGCCTTGTATGCTGGAGAGACAAGGAGATGTAGATGAGTGTAGTTTTGTC
ACCAGTTGGATGTAGCTAGCTCCTTTGCTGAAATTCCAGCACCATTTGACTCTATCTCGA
CATGATTATCTGGCTTTGGCTATGGTTGCTGTTGATGAGGGCCTTGAAAGGATGCTAGAA
CTCATTTTGGTAGATAGTGCCAAATTATGCACTGCGATGTTCTTACAGGTCAATGGTAAC
TTGTTGTTGGAAGAACATGGGTCTGGTTTTGGTAGTGTCTTGCCATCTGTTGGGTCTGTG
GCAAACCGTGTCTCCCCACAAAGTTGTCACCAACCCGGCGAGAATAGTTTCATCCTTGTC
TTATGTGAAGCATGTATTGGGCAGGAGATGAGATGTGAATAGAAGACTGTTTTTCTCCTT
GATGGGAAGCAAAACAAAGGCAGTGTTCGATATGTGATATCTGAACTGACACCAGGAAAC
CGTGATATGGAAGTTCAGTTACAAGCTGACATCAAAAGAAAATTCAGGAGTAAGGTAATG
GGCTTCCAGTTCAGAATGGTGCATGAGAAAGGCAAGGAGAATATAGTGGCTGATGCATTA
TCACGAGTGGGTTCATTTATGGCTATGTCTTGTGTCATTGCTGTCCAACCAGTTGGGATA
CAGGAGGTACCCAATTCTTCTGTGACTGCTTCTTATGCTCAGGACTTGTTGCCAAGGGTG
ACCATCCACAGCCCACATGGGGTTATGTTCTCAGTGCAGCAAGGCAAGATTAGAAGACTC
CATCAGCTTTGGGTGGGCACAAGCTCAGCACTCAGCATTATGTTGATTTCAACCTTCCAT
GATTCAACTGTTTGGGGTTATTCTGTAAGGGTTGCTTCTTATCACTGGGTTAAGAGACTG
TTTTGGTGGAAAGGTCTGAAAACCGATGTTAAGCAATTTGGAGAGCAGTGTTCAGTTTCT
GTGCAAGAGAAAGAAGAGCAGCAGTTCTTTGCTGGGTTATTCCTAGACTTTCTTGAGAAT
TTCATCAAATCTGAAGGCTGTGAAACTCTTATGGTGCTTCAGTGTGCTGTCCAGGATTAT
CCTCTGCAGTGGAAAACCTGGCTGTCACTTGCTGAACTATGGTCTAACACCTCACATTAT
TCTTCAGCAGGTTGTTTCTCCTTTAAAGCATTAGATGGGTATGAAACCTTGATGTTGGCA
GCCCCAGTGCTCAAAGGGAATAAGGATCCAGTGGTGGCTGCTTGGATTCAACCGATGCCT
GCTAACCGTTATATGTTCAAAGAGGAAATGGATATGGCTCAACAGCCTTACAATGCAGCT
ATGGTTGGGGTGTTGATCCAGTGGTCGGGCATGTCGGAGCTCTCTACGCGGAAGGATTTT
CATGCAACACAGACTCGTTTTTATATTGCCTTGCTTGGGGACAAGCAAGTTTTGGCAAGG
GGCAGATGTCATGGCCGATACCTGAGCATGACCATGGCAGAGGGACAGGAGGCTAGACGC
TGGTGTGGCTGCTGATTTGATTGTGTCGGCATTAGTGTGTGGGCTGTCGAGCGTGTGTGC
ATGGGCCGTTGTGGTGGGCTGGCCTAGTTGGGTGCCTATATACTATATAGTCTGGTGTGC
TGTATCAGAGAAGAGGATTGAATAACAGAAATCCGAAATCCACATACCTGTGTGTGCGTA
CCTGTTCTTCTTTGGTGAGGAGAGAGAGCTCACGTCCTGGGGCCATTACATATTCTTGTG
TTGCATTGTTGTCACTCAACATCCTTAAGAAAGCACTATCAATAAGCTTGGTCCTTGATT
TATTGGTTTTTGGTATTTTTAGCATTCCTTTGTGGCCTGAATACTTTGTGCAAGTATAAT
GTAGAAAACTACAACATAGCTGGACCCTGTTCCGATCAATGTTATTCTTGTTTGGTTGGC
CTGTTGGGTTCTCCTTGTTACTAGCATGATGATGCGTCTTAAAATGCCTCTGTTCTGTTT