Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037410_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:124806566:124807970:-1 gene:Zm00001d037410 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 1

Sequence

ATGGCGACTAATAAGCCTTTTGCAGTTAATAAGCTGCTGCCAGTTGTGGCCCTCCTGCTC
CTCCTCGCAGCATGTAGCTCACCGGTGGTGGTGGCTCAGCTGGTCGCCGGCTACTACAGC
AAAACATGCCCGGACGTCGAGGAGATCGTCCGCGACGAGATGGAGAAGATCATCTCGGCT
GCACCCAGCCTTGCTGGCCCGCTCCTCAGGCTGCATTTCCACGACTGCTTCGTCAGGGGC
TGTGACGCCTCTGTGCTGCTCAACTCTACGGAGGGCAACCTGGCGGAGAGGGACGCGAAG
CCGAACAAGAGCCTCCGGGGATTCGGTTCCGTGGAGAGGGTGAAGGCCAGGCTGGAGGCC
GCCTGCCCCGGCACCGTTTCCTGCGCGGACGTCCTCACCCTCATGGCCCGCGACGCCGTC
GTGCTTGCCAAGGGGCCATTCTGGCCAGTCGCGCTGGGGAGGAGAGACGGCCGTGCGTCC
AGCGCGACGGAGGCGGCCGACCATCTGCCTCCAGCTTACGGAGACGTGCCCCTGCTCACC
AGGATCTTCTCTTCCAAGGGCCTCGGCGTCAAGGACCTCGCCGTCCTCTCCGGCGCCCAC
ACGCTAGGCACGGCGCACTGCCCCTCCTACGCCGACCGCCTCTACAACTTCAGCAGCGCC
TACGACTCGGACCCGTCCCTCGACACCGCGTACGCCGACCGGCTCAGGTCGCGCTGCAAG
AGCGTCCACCACGACGACAAGGACAAGGCCATTCTGTCCGAGATGGATCCCGGCAGCTAC
AAGACCTTCGACACCAGCTACTACCGACACGTCGCCAAGCGCCGGGGGCTCTTCCAGTCC
GACGCCGCGCTCCTCGCCGACGCCACCACTAGGGAGTACGTCCACCGTATTGCCACCGGC
AAGTTTGACGACGTGTTCTTCAACGACTTCGCCGAGTCCATGACCAAGATGGCCAACGTC
GACGTGCTCACCGGTGCCGAGGGGGAGATCAGGAAGAAATGCTACATCGTCAACTAA

Peptide Sequence

PEP ID

Zm00001d037410_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:124806566:124807970:-1 gene:Zm00001d037410 transcript:Zm00001d037410_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 1

Sequence

MATNKPFAVNKLLPVVALLLLLAACSSPVVVAQLVAGYYSKTCPDVEEIVRDEMEKIISA
APSLAGPLLRLHFHDCFVRGCDASVLLNSTEGNLAERDAKPNKSLRGFGSVERVKARLEA
ACPGTVSCADVLTLMARDAVVLAKGPFWPVALGRRDGRASSATEAADHLPPAYGDVPLLT
RIFSSKGLGVKDLAVLSGAHTLGTAHCPSYADRLYNFSSAYDSDPSLDTAYADRLRSRCK
SVHHDDKDKAILSEMDPGSYKTFDTSYYRHVAKRRGLFQSDAALLADATTREYVHRIATG
KFDDVFFNDFAESMTKMANVDVLTGAEGEIRKKCYIVN

Transcript Sequence

Transcript ID

Zm00001d037410_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:124806566:124807970:-1 gene:Zm00001d037410 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peroxidase 1

Sequence

CATTATCCACATTCTTTCCAGCTAGCTCCTGAGATTACTTGCAAAACATTCTTGTTGTTT
GCTCTAGCTAGCTGCTGCACCATATATAGAACTATCGATCTGAGCCATTATATTGTTGGC
ATTTGTGCTCGATCGACGTCGTCGTCGTCGTCCCATGGCGACTAATAAGCCTTTTGCAGT
TAATAAGCTGCTGCCAGTTGTGGCCCTCCTGCTCCTCCTCGCAGCATGTAGCTCACCGGT
GGTGGTGGCTCAGCTGGTCGCCGGCTACTACAGCAAAACATGCCCGGACGTCGAGGAGAT
CGTCCGCGACGAGATGGAGAAGATCATCTCGGCTGCACCCAGCCTTGCTGGCCCGCTCCT
CAGGCTGCATTTCCACGACTGCTTCGTCAGGGGCTGTGACGCCTCTGTGCTGCTCAACTC
TACGGAGGGCAACCTGGCGGAGAGGGACGCGAAGCCGAACAAGAGCCTCCGGGGATTCGG
TTCCGTGGAGAGGGTGAAGGCCAGGCTGGAGGCCGCCTGCCCCGGCACCGTTTCCTGCGC
GGACGTCCTCACCCTCATGGCCCGCGACGCCGTCGTGCTTGCCAAGGGGCCATTCTGGCC
AGTCGCGCTGGGGAGGAGAGACGGCCGTGCGTCCAGCGCGACGGAGGCGGCCGACCATCT
GCCTCCAGCTTACGGAGACGTGCCCCTGCTCACCAGGATCTTCTCTTCCAAGGGCCTCGG
CGTCAAGGACCTCGCCGTCCTCTCCGGCGCCCACACGCTAGGCACGGCGCACTGCCCCTC
CTACGCCGACCGCCTCTACAACTTCAGCAGCGCCTACGACTCGGACCCGTCCCTCGACAC
CGCGTACGCCGACCGGCTCAGGTCGCGCTGCAAGAGCGTCCACCACGACGACAAGGACAA
GGCCATTCTGTCCGAGATGGATCCCGGCAGCTACAAGACCTTCGACACCAGCTACTACCG
ACACGTCGCCAAGCGCCGGGGGCTCTTCCAGTCCGACGCCGCGCTCCTCGCCGACGCCAC
CACTAGGGAGTACGTCCACCGTATTGCCACCGGCAAGTTTGACGACGTGTTCTTCAACGA
CTTCGCCGAGTCCATGACCAAGATGGCCAACGTCGACGTGCTCACCGGTGCCGAGGGGGA
GATCAGGAAGAAATGCTACATCGTCAACTAAAGTATACATGTATTATCAGCTAGCTAAAT
CATTATTGTTGTTTTAATGAGTTTAACTCCGTCCACTAGATGATAGGGCGTGTGTCTGCC
TGTTATTAATCAATGTAATGTATGTACTCCTATTTTGCTGTAAATTCATTCTTATCAATA