Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037401_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:6:124550208:124584024:-1 gene:Zm00001d037401 gene_biotype:protein_coding transcript_biotype:protein_coding description:proteasome activating protein 200
Sequence	ATGCACCTCTACAACGCGTGGCTACCGCCACCGGTGTCGACCGCGGCGCGTGGGGAGGCA GCTGCCTTTGCGGGCGCTGTGCGGACCGCCGCGGACGCGTGGCTGCCCGGGGACTCCGAC TCCGCCTACGCCACACTCAAGTGGATCTCCGTGTTCGACCTTTTTATTAAAGCGAAGAGT GACATTGCTTCTGAGGATCTTCAGGCTCTTGTAAAGCTTGGACTGGAGGTATTTCATGCG TCACATAACAAGTTTGTTGTCCAGATTAAGTGGGGAGGTCTGCTCATAAGGCTTTTAAGA AAGCATGGGAAGAGGCTTTCACTTGTTGTGCAATGGAGACCACTTTATGAGACGTTGATA AGGACTCATTTCAAGAGAAACATGGGCCCTGAGGGCTGGAAAGTAAGGAAGCAACACTTT GAGACTGTGACCTCTTTAGTGTGTGCATCTAGGAATTTCTTTACTGAAGGTGTGGCTGCT GAAATTTGGTCAGAGTTCAGGCCCTTGCTGGAAAATCCATGGCATAACTCAGCATTTGAA GGTGTTGGATTTCTCAGGCTGTTTCTTCCAGCGAACTCGAGGAATCAGGATCACTTTACA ACTGATTGGATTAGAAATTGTCTGGACATATGGGATTCTGTCACAAATTGTAACTTCTGG GACATCCAATGGGCTTCCATCATAGCACGTTGTATAAAAAATTCAAGATCTGTGAACTGG GATGCTTTTCTTCCCTTGTTATTCACAAGATACTTGAACATGTTTGAGGTTCCTATATCA AGTGGCAATGGTTCATACCCCTTTCCAGTGGAGGTTCCTGGGAACACAAGATTTTTATTT TCCAGTAAGACCAGAACACTTTCCAAGGCAATTGCAAAGTCTGTTGTATACCTTTTGAAG CCTAAAAGTTTAGCATTTGAGTATTTTGAGAAGCTCATTAATTTTTTGGAACAGTTCTAT CATCCGTCAAATGGGGGTCGTTGGACCTACTCATTGGAACGCTTCCTGCGCTATCTTGTT GTTTACTTTGAGAAACGCCTTCAGCATGAACAATTTGTTATGGCAGTTGAGGACCATGAT CAATCTTATCTGGGAAAGGAAGAAAGGTCTGTTTTTGTCAAAGCTATCTTGAAATTATTG GATCGTGGTCAGTACAGCAAGGATAATTCTCTTGCTGAAACAGTTTCCGTTGCAACTTCG ATCCTGTCTTATATTGAACCAACCCTCGTGCTTCAGTTTGTTGCAAAAAACTTCCAACGA GCCTTAGAGACAACTACAGCTACCCATCAGTTAAAGAACGCTGTCACATCTGTTGCATTT TCTGGACGTGCTCTTCTTCTATGTTCTTTATGTTCATCTCAGAATGATGATAGCAGTGTT GTTGATTCATTCAGTGATCTTGTTGTCGCTTCCCTTTCAAATGCGTTACTTGGCATGGAT GCCAATGATCCACCTAAAACTATTGCTACAATGCAGTTAATTGGGTCTATCTTTTCAAAT CTAGCTGCAGTTAGTGATGATGTGCCTATATTGCTCCAATCTACTACTCTATCGAACTGG CTAGATGAATTCTTTTCCCGACTGTTTTCTGTGCTTCATAATCTGGAATCAAGTAGTCCC ATTAATGAGGGTTACCAAAGCTCATTCATGTCAGGGACTTTTCTTGTTGACAGTCCATAT TACTTTTGTATGCTTGAAATTCTTCTAGGGAAGTTATCAAAACCCTTATTTAATCAGTCC CTGAAGAGAATTGCCAAGTTCGTTAATGCAAATATCCTCCCTGGTGCTACTTCAGAAGTT GGGCTTCTTTGTTGTGCCTGTGTTCATTCTTATCCTGAGGAGGCTTCAGTCTACCTTGTA AAGCCAATCTTAGAGACCATCATGTCATCCTTTGAGGGGACTCCAACCACTGGTTATGTA GGAAGAGTAGTTGCAGATAAAGCATCTACCAAGGCTGCACTTTCTCCTGCTCTGGAAACA GCAATAGATTACTATCTGAGGGTTTTGGCCATATCCATCAGTTATGCCGGTCCTACCTTA CTCAATTATAAGGAGGAACTAAATCACATAATAACATCTGCGTTCCAGTCCCCTTCTTGG AAGGTTAATGGAGCTGGGGATCATCTCCTTCGCTCTCTGCTAGGAAATCTGGTTTCTTAT TACCCAATTGATCAGTACAAGCCATTCACTTGTCAGCCTATTGGAAATATTATTGAACCA TGGGGGTGTTCGAAAGCTCATCAGGATAGGGAGGATGAAATGCTTAATTTCCCTCCAAAG TGGCATGATCCAAGTCATGATGAACTCTCTTTTGCAAATGAATTACTACAACTTCATTTC CAGTCAGCTTTAGAAGATCTTTTGACTATTTGTCAGACAAAAGTTCATTCTGACACAGGA GATGAGAAGGAGCACCTAAAAATAACCCTGTTACGCATTCATTCTGCATTGCATGGTGTA ATGTCTTGTTTACCAGAAATTCGCCCGTCATATAAAGATGGGAGGTCCCTGGAAGTGGAG TCGGCTTTCTTCATAGCAGGATCTGCTGGTAGCACTGTTGGAAGCTCAGAAATGCGTGAA AAGGCTGCAGAATTTGTGCACATAGCTTGCAGGTACTTATTAAAGGAAAGAACTGATGAC AGTATTCTTCTATCCCTTGTTGTGCGTGTCATTGATGCTTTGGTAAACTATGGAAGCTTG GAATACCAAGAATGGTCAAGCCATGTTCAAGCTTGGAAACTAGAATCTGCTTCCATAATT GAGCCTCCATGCAACTTCATTGTTCCATTTCATGCTCAAGGAAAAAAGAGACCTAGATGG GCACTTGTTGACAAAGCAAACTTGCATAGTACATGGAGGTGTTCACAATCATCATATCAC AGATACAGAATGAATGCAGATGTTTCGCCATCTGTCCCCATGATTAATTTGATGAATGAT CTCTTAGATCTCTCACTACACAACTATGAAACTGTTCGATCGTATGCTGGAAGATCGCTT ACAAAATTGTTGAAACGTTGGCCTTCTCTAATTTCTAATTGTGTTCTCACACTCACGGGA AATTTGCGTGACCCAAAAGCTCCTGAACATGTTGTTCTTGGTTCTTGCAGCATTCTGATC TCACAGACTGTTTTAAGACACTTGACCACTGATTCTGTTTCCCTCTCTTCCTTTATCATG GGAATTCTGGAAAGCTCTCATCATGAATCGTTGAAGTGTCAGAAAGCTATTACTGAGCTC TTTGTAACATATAATATACGTTTCTCTGGAATATCAAGGAGCTTCTTTAAAACTCCTGAA AATCAAGCTGACAAGCCAGGATTTCTCAGTCTAATTTCTCAAATTAATGCTTTGGGCTTT GAGACTAATGGACTACATTGGAGGTAA

Peptide Sequence

PEP ID	Zm00001d037401_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:6:124550208:124584024:-1 gene:Zm00001d037401 transcript:Zm00001d037401_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:proteasome activating protein 200
Sequence	MHLYNAWLPPPVSTAARGEAAAFAGAVRTAADAWLPGDSDSAYATLKWISVFDLFIKAKS DIASEDLQALVKLGLEVFHASHNKFVVQIKWGGLLIRLLRKHGKRLSLVVQWRPLYETLI RTHFKRNMGPEGWKVRKQHFETVTSLVCASRNFFTEGVAAEIWSEFRPLLENPWHNSAFE GVGFLRLFLPANSRNQDHFTTDWIRNCLDIWDSVTNCNFWDIQWASIIARCIKNSRSVNW DAFLPLLFTRYLNMFEVPISSGNGSYPFPVEVPGNTRFLFSSKTRTLSKAIAKSVVYLLK PKSLAFEYFEKLINFLEQFYHPSNGGRWTYSLERFLRYLVVYFEKRLQHEQFVMAVEDHD QSYLGKEERSVFVKAILKLLDRGQYSKDNSLAETVSVATSILSYIEPTLVLQFVAKNFQR ALETTTATHQLKNAVTSVAFSGRALLLCSLCSSQNDDSSVVDSFSDLVVASLSNALLGMD ANDPPKTIATMQLIGSIFSNLAAVSDDVPILLQSTTLSNWLDEFFSRLFSVLHNLESSSP INEGYQSSFMSGTFLVDSPYYFCMLEILLGKLSKPLFNQSLKRIAKFVNANILPGATSEV GLLCCACVHSYPEEASVYLVKPILETIMSSFEGTPTTGYVGRVVADKASTKAALSPALET AIDYYLRVLAISISYAGPTLLNYKEELNHIITSAFQSPSWKVNGAGDHLLRSLLGNLVSY YPIDQYKPFTCQPIGNIIEPWGCSKAHQDREDEMLNFPPKWHDPSHDELSFANELLQLHF QSALEDLLTICQTKVHSDTGDEKEHLKITLLRIHSALHGVMSCLPEIRPSYKDGRSLEVE SAFFIAGSAGSTVGSSEMREKAAEFVHIACRYLLKERTDDSILLSLVVRVIDALVNYGSL EYQEWSSHVQAWKLESASIIEPPCNFIVPFHAQGKKRPRWALVDKANLHSTWRCSQSSYH RYRMNADVSPSVPMINLMNDLLDLSLHNYETVRSYAGRSLTKLLKRWPSLISNCVLTLTG NLRDPKAPEHVVLGSCSILISQTVLRHLTTDSVSLSSFIMGILESSHHESLKCQKAITEL FVTYNIRFSGISRSFFKTPENQADKPGFLSLISQINALGFETNGLHWR

Transcript Sequence

Transcript ID	Zm00001d037401_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:124550208:124584024:-1 gene:Zm00001d037401 gene_biotype:protein_coding transcript_biotype:protein_coding description:proteasome activating protein 200
Sequence	ACCACCACCCATCCATTTTCGCCTTGGCTTGACCCGCGGAGCTCTGACTCAGAGGGCATC CACGGCGGCGGCAGTGCGAGGGTCCGAGGGAAGATTGGAGGATGCACCTCTACAACGCGT GGCTACCGCCACCGGTGTCGACCGCGGCGCGTGGGGAGGCAGCTGCCTTTGCGGGCGCTG TGCGGACCGCCGCGGACGCGTGGCTGCCCGGGGACTCCGACTCCGCCTACGCCACACTCA AGTGGATCTCCGTGTTCGACCTTTTTATTAAAGCGAAGAGTGACATTGCTTCTGAGGATC TTCAGGCTCTTGTAAAGCTTGGACTGGAGGTATTTCATGCGTCACATAACAAGTTTGTTG TCCAGATTAAGTGGGGAGGTCTGCTCATAAGGCTTTTAAGAAAGCATGGGAAGAGGCTTT CACTTGTTGTGCAATGGAGACCACTTTATGAGACGTTGATAAGGACTCATTTCAAGAGAA ACATGGGCCCTGAGGGCTGGAAAGTAAGGAAGCAACACTTTGAGACTGTGACCTCTTTAG TGTGTGCATCTAGGAATTTCTTTACTGAAGGTGTGGCTGCTGAAATTTGGTCAGAGTTCA GGCCCTTGCTGGAAAATCCATGGCATAACTCAGCATTTGAAGGTGTTGGATTTCTCAGGC TGTTTCTTCCAGCGAACTCGAGGAATCAGGATCACTTTACAACTGATTGGATTAGAAATT GTCTGGACATATGGGATTCTGTCACAAATTGTAACTTCTGGGACATCCAATGGGCTTCCA TCATAGCACGTTGTATAAAAAATTCAAGATCTGTGAACTGGGATGCTTTTCTTCCCTTGT TATTCACAAGATACTTGAACATGTTTGAGGTTCCTATATCAAGTGGCAATGGTTCATACC CCTTTCCAGTGGAGGTTCCTGGGAACACAAGATTTTTATTTTCCAGTAAGACCAGAACAC TTTCCAAGGCAATTGCAAAGTCTGTTGTATACCTTTTGAAGCCTAAAAGTTTAGCATTTG AGTATTTTGAGAAGCTCATTAATTTTTTGGAACAGTTCTATCATCCGTCAAATGGGGGTC GTTGGACCTACTCATTGGAACGCTTCCTGCGCTATCTTGTTGTTTACTTTGAGAAACGCC TTCAGCATGAACAATTTGTTATGGCAGTTGAGGACCATGATCAATCTTATCTGGGAAAGG AAGAAAGGTCTGTTTTTGTCAAAGCTATCTTGAAATTATTGGATCGTGGTCAGTACAGCA AGGATAATTCTCTTGCTGAAACAGTTTCCGTTGCAACTTCGATCCTGTCTTATATTGAAC CAACCCTCGTGCTTCAGTTTGTTGCAAAAAACTTCCAACGAGCCTTAGAGACAACTACAG CTACCCATCAGTTAAAGAACGCTGTCACATCTGTTGCATTTTCTGGACGTGCTCTTCTTC TATGTTCTTTATGTTCATCTCAGAATGATGATAGCAGTGTTGTTGATTCATTCAGTGATC TTGTTGTCGCTTCCCTTTCAAATGCGTTACTTGGCATGGATGCCAATGATCCACCTAAAA CTATTGCTACAATGCAGTTAATTGGGTCTATCTTTTCAAATCTAGCTGCAGTTAGTGATG ATGTGCCTATATTGCTCCAATCTACTACTCTATCGAACTGGCTAGATGAATTCTTTTCCC GACTGTTTTCTGTGCTTCATAATCTGGAATCAAGTAGTCCCATTAATGAGGGTTACCAAA GCTCATTCATGTCAGGGACTTTTCTTGTTGACAGTCCATATTACTTTTGTATGCTTGAAA TTCTTCTAGGGAAGTTATCAAAACCCTTATTTAATCAGTCCCTGAAGAGAATTGCCAAGT TCGTTAATGCAAATATCCTCCCTGGTGCTACTTCAGAAGTTGGGCTTCTTTGTTGTGCCT GTGTTCATTCTTATCCTGAGGAGGCTTCAGTCTACCTTGTAAAGCCAATCTTAGAGACCA TCATGTCATCCTTTGAGGGGACTCCAACCACTGGTTATGTAGGAAGAGTAGTTGCAGATA AAGCATCTACCAAGGCTGCACTTTCTCCTGCTCTGGAAACAGCAATAGATTACTATCTGA GGGTTTTGGCCATATCCATCAGTTATGCCGGTCCTACCTTACTCAATTATAAGGAGGAAC TAAATCACATAATAACATCTGCGTTCCAGTCCCCTTCTTGGAAGGTTAATGGAGCTGGGG ATCATCTCCTTCGCTCTCTGCTAGGAAATCTGGTTTCTTATTACCCAATTGATCAGTACA AGCCATTCACTTGTCAGCCTATTGGAAATATTATTGAACCATGGGGGTGTTCGAAAGCTC ATCAGGATAGGGAGGATGAAATGCTTAATTTCCCTCCAAAGTGGCATGATCCAAGTCATG ATGAACTCTCTTTTGCAAATGAATTACTACAACTTCATTTCCAGTCAGCTTTAGAAGATC TTTTGACTATTTGTCAGACAAAAGTTCATTCTGACACAGGAGATGAGAAGGAGCACCTAA AAATAACCCTGTTACGCATTCATTCTGCATTGCATGGTGTAATGTCTTGTTTACCAGAAA TTCGCCCGTCATATAAAGATGGGAGGTCCCTGGAAGTGGAGTCGGCTTTCTTCATAGCAG GATCTGCTGGTAGCACTGTTGGAAGCTCAGAAATGCGTGAAAAGGCTGCAGAATTTGTGC ACATAGCTTGCAGGTACTTATTAAAGGAAAGAACTGATGACAGTATTCTTCTATCCCTTG TTGTGCGTGTCATTGATGCTTTGGTAAACTATGGAAGCTTGGAATACCAAGAATGGTCAA GCCATGTTCAAGCTTGGAAACTAGAATCTGCTTCCATAATTGAGCCTCCATGCAACTTCA TTGTTCCATTTCATGCTCAAGGAAAAAAGAGACCTAGATGGGCACTTGTTGACAAAGCAA ACTTGCATAGTACATGGAGGTGTTCACAATCATCATATCACAGATACAGAATGAATGCAG ATGTTTCGCCATCTGTCCCCATGATTAATTTGATGAATGATCTCTTAGATCTCTCACTAC ACAACTATGAAACTGTTCGATCGTATGCTGGAAGATCGCTTACAAAATTGTTGAAACGTT GGCCTTCTCTAATTTCTAATTGTGTTCTCACACTCACGGGAAATTTGCGTGACCCAAAAG CTCCTGAACATGTTGTTCTTGGTTCTTGCAGCATTCTGATCTCACAGACTGTTTTAAGAC ACTTGACCACTGATTCTGTTTCCCTCTCTTCCTTTATCATGGGAATTCTGGAAAGCTCTC ATCATGAATCGTTGAAGTGTCAGAAAGCTATTACTGAGCTCTTTGTAACATATAATATAC GTTTCTCTGGAATATCAAGGAGCTTCTTTAAAACTCCTGAAAATCAAGCTGACAAGCCAG GATTTCTCAGTCTAATTTCTCAAATTAATGCTTTGGGCTTTGAGACTAATGGACTACATT GGAGGTAAGAAATTTGTATATTCTGATGACATAAACTGAGACACCGCTAGAGACATTGTA CTTACATTTTTTCCTATCTGAAATCTAAGTTTTTTCATCCCATTTGTATTTGCTGAACCA GTTTTTCTATTTAACTTTTCTACTGTTCTCTTGATCTCTTACTTTCTGATTCCGTACTGA GTTCTTTTTTCAGTTTATAGTTTGGTTATTGCCTAATTGATCATATCCCAATCCTCCTCC ATGGTCCATGCCATCATATTATCACTCTTTTCAAATTTATCTCGAACTTAATCCATTTCA GGTAGGTTGTGTTTTTTAGTATTAAATTTATATACGCTGAAGAAATTTCTTTGTTTCAGT TTTCTACTGTTCTCTTTCTTCAGATTCTGTACTGAGCTCTCTTTTCAGTATATAGTTTCT TCATTGACTAATTGATCATATCCCAAATTCCCAATTCCTTCATGATCCATGTTACTAACC TGAGGAAACCATAATAACAACACCCTTAGTGGAGATAGCTGTATATATATAGAGCCTCAT GGGCCATGTTGGCCTCTAGTAGATGTGCCTTCATACACTAAACACCCCCCTTTAAACTTA GTGTGCTCACGTGGTGTAAGCAAAACATAGCATGTACATCCAAAAACTCTTAGATGATCT TAGCTTAGAGGGGTATCAATCAGACTTTATCAGGACATTTGCTTGACAGTTTTGAAGACC CTATTGTCTATTGATGAGATAAACATCCGTAGAAACAACTTCACTCCAAACATGAGAAGG GACAAAAGATGAAATAAAAGTATGGGAGTTGTCCTTATAAGATGGGGATGCTTTTGTTAA GCAACACCATTCTGAGCCTGAGCGCCAGGACAAGGGAGCTTAGCAAGACTACCCTTTGAG GAGAAAAATTGTCGAAAAGCATAGGACAAAACACTCACCACC