Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037367_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:123035723:123040543:1 gene:Zm00001d037367 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

ATGGGGTGGAAGGTTAAGTCGTCGCCGGCGGCGGCGCCCGGCGACAAGCTCAGGTTCCCT
CCCTCCTCCGCCGCGCGGTCGCGGATGAAGCTCTGGCTGGTGCCCGCCACCACCACGGTG
CTGCTCTGGACCTGCGTCCTGCAGCTCACCGCCGTCGGGGACACCTGGGGCCCACGTGTG
CTCAAGGGCTGGCCCTCCTGCCTCACGCCGCACGAGGAGGCTTCCGCCGCGCGCCCGCAC
CCTCTCGCCGTCGACAAGGCCGCGCTCGCGCTGCCGCCCAAAAGAATATATAGGAACAAT
GGTTACTTGATGGTTTCGTGCAATGGTGGGCTTAACCAAATGCGAGCTGCAATATGTGAC
ATGGTTGTAATTGCAAGATATTTGAATGTGACTTTAGTCGTGCCAGAGTTGGATAAAACT
TCATTTTGGAACGATCCAAGTGAGTTCCAAGATATATTTGATGTTGAGCACTTTATAACC
TCATTACGAGGTGAAGTTCGCATTCTGAGAGAATTACCTCCAAGGGTAAAGAGAAGAGTT
GAACTTGGAATGTTTCACTCCATGCCTCCAATTAGTTGGTCTGATATCTCCTACTATCAA
AATCAGATTCTTCCTTTGATTCGTAAGTACAAGGTTCTCCATTTGAATAGAACTGATGCT
AGGCTAGCAAACAATGGTTTACCAATAGAAATTCAGAAACTTCGATGCCGAGTAAATTAT
GCCTCCCTCAAATTTACCCCACAAATTGAAGAGTTGGGCAAGAGAGTAATTAGAATTCTT
CGCCAAAATGGACCTTTCTTGGTACTTCATTTACGGTATGAAATGGATATGTTGGCTTTC
TCTGGCTGTACACAAGGTTGCAGTACTGAAGAGGCAGAAGAACTCACAAGAATGAGGTAT
GCTTATCCATGGTGGAAAGAAAAAGTGATTGACTCAGACTTGAAAAGAAAAGATGGCCTT
TGCCCATTGACGCCTGAGGAGACTGCTCTTGTCCTCAGAGCACTTGACATCGATAGAAGT
ATGCAAATATACATTGCTGCTGGGGAAATATACGGTGGAAAGCGCAGGATGGCTTCTCTA
ACTTCAGCATACCCGAATGTTGTGAGGAAGGAGACACTTCTGGAACCTTCTGATCTGATG
TTCTTCCAGAACCATTCATCACAAATGGCAGCACTTGATTACTTAGTATCCTTAGAAAGT
GATATATTTGTTCCAACATATGATGGAAACATGGCTAAAGTCGTTGAGGGTCATCGGAGA
TTCATGGGTTACAAGAAGACCGTCTTGTTAGACCGAAAACTCATTGTTGAGCTAGTGGAC
CGGTACACAAATGGTTCTCTGCTGTGGGATGAGTTCTCTTCACTGATCAAGGTTGCCCAT
GCAAAGCGGATGGGATCAGCTTCAAAGAGGATGGTGATTCCTGACAGACCCAAGGAAGAG
GACTATTTCTATGCCAATCCCCAAGAATGCCTCCAGGATCGTGATTTTTTGCAAACATCA
TAA

Peptide Sequence

PEP ID

Zm00001d037367_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:123035723:123040543:1 gene:Zm00001d037367 transcript:Zm00001d037367_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

MGWKVKSSPAAAPGDKLRFPPSSAARSRMKLWLVPATTTVLLWTCVLQLTAVGDTWGPRV
LKGWPSCLTPHEEASAARPHPLAVDKAALALPPKRIYRNNGYLMVSCNGGLNQMRAAICD
MVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRGEVRILRELPPRVKRRV
ELGMFHSMPPISWSDISYYQNQILPLIRKYKVLHLNRTDARLANNGLPIEIQKLRCRVNY
ASLKFTPQIEELGKRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCSTEEAEELTRMRY
AYPWWKEKVIDSDLKRKDGLCPLTPEETALVLRALDIDRSMQIYIAAGEIYGGKRRMASL
TSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRR
FMGYKKTVLLDRKLIVELVDRYTNGSLLWDEFSSLIKVAHAKRMGSASKRMVIPDRPKEE
DYFYANPQECLQDRDFLQTS

Transcript Sequence

Transcript ID

Zm00001d037367_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:123035723:123040543:1 gene:Zm00001d037367 gene_biotype:protein_coding transcript_biotype:protein_coding description:O-fucosyltransferase family protein
Sequence

GGCAGCGACCAGCGAGGCTGGCAGGCACTCGCATTTTCGCACAGGCGAGGCGAGGCGAGG
CACCGACGCCCAAAAATAACTAGGCGTCCCCACAAACCGCTCAACCTTCCCTCCCTCTCC
CCTCTTCATCGCTCCGCTGCGCTGGCCACGAGATCCACGCCGCCTCCTCTCCGGCGCCCC
GCCCTCGCCTCTGGTGGGCCACGCTGCCCTCCTCGCGACCTCCGCGCGGCTGCGAACGAC
CGACGACCGCCGGTTTCGCTGAGCACTGCGCAGGAGGCACGAGGAGGTGGATTCCCCGAC
AGGCGCGGTGCCGGCCTGAGTGACAGGGCGGCCGGGCGCCGGTGACCTGCTCGGCTTCGC
CAAATTTGCGGGCGGCGTCTTGCGCCGTGCTGCTGTCGCTGGAGGCGTGGAGCAAGGGAG
CCCGGAGGAGGGGGAGGCCTTGCTCGCAGCCGCATTGGCCGGTAATACTATCTCCGACCG
AGGAGGCAGGCGGCCGATTTAGTAGTTCCCTCCCCGCTCCGGACGCGCCGGGCGCCCTAG
GTGCCTCTCGCCCCCGCTTGGTCCATGGTCCATGGGGTGGAAGGTTAAGTCGTCGCCGGC
GGCGGCGCCCGGCGACAAGCTCAGGTTCCCTCCCTCCTCCGCCGCGCGGTCGCGGATGAA
GCTCTGGCTGGTGCCCGCCACCACCACGGTGCTGCTCTGGACCTGCGTCCTGCAGCTCAC
CGCCGTCGGGGACACCTGGGGCCCACGTGTGCTCAAGGGCTGGCCCTCCTGCCTCACGCC
GCACGAGGAGGCTTCCGCCGCGCGCCCGCACCCTCTCGCCGTCGACAAGGCCGCGCTCGC
GCTGCCGCCCAAAAGAATATATAGGAACAATGGTTACTTGATGGTTTCGTGCAATGGTGG
GCTTAACCAAATGCGAGCTGCAATATGTGACATGGTTGTAATTGCAAGATATTTGAATGT
GACTTTAGTCGTGCCAGAGTTGGATAAAACTTCATTTTGGAACGATCCAAGTGAGTTCCA
AGATATATTTGATGTTGAGCACTTTATAACCTCATTACGAGGTGAAGTTCGCATTCTGAG
AGAATTACCTCCAAGGGTAAAGAGAAGAGTTGAACTTGGAATGTTTCACTCCATGCCTCC
AATTAGTTGGTCTGATATCTCCTACTATCAAAATCAGATTCTTCCTTTGATTCGTAAGTA
CAAGGTTCTCCATTTGAATAGAACTGATGCTAGGCTAGCAAACAATGGTTTACCAATAGA
AATTCAGAAACTTCGATGCCGAGTAAATTATGCCTCCCTCAAATTTACCCCACAAATTGA
AGAGTTGGGCAAGAGAGTAATTAGAATTCTTCGCCAAAATGGACCTTTCTTGGTACTTCA
TTTACGGTATGAAATGGATATGTTGGCTTTCTCTGGCTGTACACAAGGTTGCAGTACTGA
AGAGGCAGAAGAACTCACAAGAATGAGGTATGCTTATCCATGGTGGAAAGAAAAAGTGAT
TGACTCAGACTTGAAAAGAAAAGATGGCCTTTGCCCATTGACGCCTGAGGAGACTGCTCT
TGTCCTCAGAGCACTTGACATCGATAGAAGTATGCAAATATACATTGCTGCTGGGGAAAT
ATACGGTGGAAAGCGCAGGATGGCTTCTCTAACTTCAGCATACCCGAATGTTGTGAGGAA
GGAGACACTTCTGGAACCTTCTGATCTGATGTTCTTCCAGAACCATTCATCACAAATGGC
AGCACTTGATTACTTAGTATCCTTAGAAAGTGATATATTTGTTCCAACATATGATGGAAA
CATGGCTAAAGTCGTTGAGGGTCATCGGAGATTCATGGGTTACAAGAAGACCGTCTTGTT
AGACCGAAAACTCATTGTTGAGCTAGTGGACCGGTACACAAATGGTTCTCTGCTGTGGGA
TGAGTTCTCTTCACTGATCAAGGTTGCCCATGCAAAGCGGATGGGATCAGCTTCAAAGAG
GATGGTGATTCCTGACAGACCCAAGGAAGAGGACTATTTCTATGCCAATCCCCAAGAATG
CCTCCAGGATCGTGATTTTTTGCAAACATCATAATCTGAGTTCGTGATCTACGGGCCAAA
GCATTGGTGAAAGTGTTTCTGTCGGTACTGATGATTTCTTCATGTGGGCTGGGCAAAAAC
AACGCAGAGCGTTTTATCAGTTTGCATGTGTCCGTTGGCATTGTGCCAATGCCAACGTAC
TTTTATTTCACCATTGGCAGCTTTGTCAGCTGTTCAGTTATCACTTGTCAATTGTCGTAG
TGACACAATGCCAATATAAAAGTACTTTTATG