Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037278_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:6:119172940:119179092:-1 gene:Zm00001d037278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructose kinase1 description: phosphofructose kinase1
Sequence

ATGATCTGCAGTGGAAGGGACAAGATTGAAACACCGGAGCAGTTTAAGCAAGCTGAAGAC
ACGGCCAACAAGCTTGATTTGGATGGACTTGTTGTCATTGGTGGTGATGATTCAAACACC
AATGCCTGCCTCCTTGGTGAATACTTTAGGTCAAGGAACATGAAAACCCGTGTTATTGGT
TGCCCAAAGACTATCGATGGGGATCTGAAATGTAAGGAGGTTCCGACAAGCTTTGGATTT
GATACAGCTTGCAAGATATACTCTGAAATGATTGGCAATGTTATGACTGATGCGAGATCC
ACTGGAAAATACTACCACTTTGTGAGGCTTATGGGTCGTGCTGCTTCTCACATTACGCTG
GAATGCGCTTTGCAAACACACCCCAATGCTGCACTCATTGGGGAAGAGGTTGCTGCAAAG
AAGCAAACCCTTAAGAATGTCACAAACTACATTACTGATATCATCTGCAAGCGTGCAGAT
CTTGGTTACAACTATGGTGTTATCCTTATACCAGAAGGCCTGATTGATTTCATCCCAGAG
GTTCAAAAACTCATCGCGGAATTGAATGAAATTTTGGCACATGATGTTGTTGATGAGGCA
GGGGCCTGGAAAAGCAAGCTTCAGCCTGAATCAAGGGAGCTGTTTGAGTTTTTGCCCAAT
ACTATTCAGGAGCAACTTATGCTTGAAAGGGATCCCCATGGCAATGTTCAGGTCGCAAAA
ATTGAAACCGAGAAAATGCTCATTAGCATGGTGGAAACTGAACTGGAGAAGAGAAAGGCA
GAGGGGAGATACTCTGCACATTTCAGAGGGCAAGCTCATTTCTTTGGGTACGAAGGAAGA
TGCGGCCTTCCTACTAATTTTGATTCTAACTATTGCTATGCATTAGGCTATGGCGCTGGT
GCCCTTCTCCAAAGTGGGAAGACAGGACTTATTTCCTCGGTTGGCAACCTTGCGGCTCCA
GTTGAAGAATGGACTGTTGGTGGAACAGCATTAACATCACTGATGGATGTTGAGAGGAGG
CACGGCAAGTTCAAGCCAGTGATCAAGAAGGCTATGGTCGAACTTGATGCTGCACCTTTC
AAGAAATATGCATCGATGCGTGATGAGTGGGCCCTCAAGAACAGATACATCAGCCCTGGC
CCCATCCAGTTCAGTGGCCCTGGAAGTAATGACTCGAACCATACTTTGATGCTGGAACTC
GGTGCTGCGCTATAG

Peptide Sequence

PEP ID

Zm00001d037278_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:6:119172940:119179092:-1 gene:Zm00001d037278 transcript:Zm00001d037278_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructose kinase1 description: phosphofructose kinase1
Sequence

MICSGRDKIETPEQFKQAEDTANKLDLDGLVVIGGDDSNTNACLLGEYFRSRNMKTRVIG
CPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITL
ECALQTHPNAALIGEEVAAKKQTLKNVTNYITDIICKRADLGYNYGVILIPEGLIDFIPE
VQKLIAELNEILAHDVVDEAGAWKSKLQPESRELFEFLPNTIQEQLMLERDPHGNVQVAK
IETEKMLISMVETELEKRKAEGRYSAHFRGQAHFFGYEGRCGLPTNFDSNYCYALGYGAG
ALLQSGKTGLISSVGNLAAPVEEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELDAAPF
KKYASMRDEWALKNRYISPGPIQFSGPGSNDSNHTLMLELGAAL

Transcript Sequence

Transcript ID

Zm00001d037278_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:119172940:119179092:-1 gene:Zm00001d037278 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructose kinase1 description: phosphofructose kinase1
Sequence

GCTTCGCCTACGGCATATTCCCCCGAGGCCCCGAACCAAACCAAACCAAACCAAACCAAA
CCAGCCCAGATCAGCGAAACACACTCCGCTCTCCCGAGACCGGACACATGGCGGCGGCGG
CGGTGACGTCCAACGGCGGCGCAGTGGCCGCAAATGGGCCGGCGCCCGGCCGGCTGGCCT
CCGTGTACAGCGAGGTGCAGACGAACCGGCTCCTGCACGCCCTTCCCCTCCCCTCCGTCC
TCCGCTCCAACTTCTCGGTCGTCGTCGGCCCCGCCAGCTCCGCCGCGGGCAACCCCGATG
AGATCGCCAAGCTCTTCCCCAACCTGTTCGGCCAGCCCTCGGCGTCGCTGGTGCCGTCGG
CCGAGCCCGCGGCGACCAGGCCGCTCAAGATCGGCGTTGTGCTCTCCGGTGGACAGGCGC
CGGGCGGCCACAATGTCATCTGCGGCATCTTTGACTATCTACAGGAGCGTGCAAAAGGCA
GCACCTTGTATGGATTTAAGGGAGGCCCAGCTGGGATCATGAAGTGCAAGTATGTAGAAC
TCACTTCAGACTTTGTGTATCCCTACAGAAATCAGGTACAGATAGGGTGGATTTGATATG
ATCTGCAGTGGAAGGGACAAGATTGAAACACCGGAGCAGTTTAAGCAAGCTGAAGACACG
GCCAACAAGCTTGATTTGGATGGACTTGTTGTCATTGGTGGTGATGATTCAAACACCAAT
GCCTGCCTCCTTGGTGAATACTTTAGGTCAAGGAACATGAAAACCCGTGTTATTGGTTGC
CCAAAGACTATCGATGGGGATCTGAAATGTAAGGAGGTTCCGACAAGCTTTGGATTTGAT
ACAGCTTGCAAGATATACTCTGAAATGATTGGCAATGTTATGACTGATGCGAGATCCACT
GGAAAATACTACCACTTTGTGAGGCTTATGGGTCGTGCTGCTTCTCACATTACGCTGGAA
TGCGCTTTGCAAACACACCCCAATGCTGCACTCATTGGGGAAGAGGTTGCTGCAAAGAAG
CAAACCCTTAAGAATGTCACAAACTACATTACTGATATCATCTGCAAGCGTGCAGATCTT
GGTTACAACTATGGTGTTATCCTTATACCAGAAGGCCTGATTGATTTCATCCCAGAGGTT
CAAAAACTCATCGCGGAATTGAATGAAATTTTGGCACATGATGTTGTTGATGAGGCAGGG
GCCTGGAAAAGCAAGCTTCAGCCTGAATCAAGGGAGCTGTTTGAGTTTTTGCCCAATACT
ATTCAGGAGCAACTTATGCTTGAAAGGGATCCCCATGGCAATGTTCAGGTCGCAAAAATT
GAAACCGAGAAAATGCTCATTAGCATGGTGGAAACTGAACTGGAGAAGAGAAAGGCAGAG
GGGAGATACTCTGCACATTTCAGAGGGCAAGCTCATTTCTTTGGGTACGAAGGAAGATGC
GGCCTTCCTACTAATTTTGATTCTAACTATTGCTATGCATTAGGCTATGGCGCTGGTGCC
CTTCTCCAAAGTGGGAAGACAGGACTTATTTCCTCGGTTGGCAACCTTGCGGCTCCAGTT
GAAGAATGGACTGTTGGTGGAACAGCATTAACATCACTGATGGATGTTGAGAGGAGGCAC
GGCAAGTTCAAGCCAGTGATCAAGAAGGCTATGGTCGAACTTGATGCTGCACCTTTCAAG
AAATATGCATCGATGCGTGATGAGTGGGCCCTCAAGAACAGATACATCAGCCCTGGCCCC
ATCCAGTTCAGTGGCCCTGGAAGTAATGACTCGAACCATACTTTGATGCTGGAACTCGGT
GCTGCGCTATAGAGATGCGTCCTTTACTTTGTTCTTACAGTTTTTGGGAGTGGAGACTGG
CCACTGGAGCAGCCTGCAGGTCTCCATATTGTGTGTGAAATTGTTTAATAAGAGGTTTGA
TGGGAGTTTTTTGCGTAGCCGACTGGATGTAGTAGCAAAATAAGAACAGGGTTTTTTAGT
TTTTTTTGTATGATTTACGCACCAACTGACCGGTCTTGTAGCTCCGATTCTGTTCCCCCT
GGTTGGCTGGTTGCAATCTCTTGAGAATGAACAAAATGAAGTTG