Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037252_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:6:118129961:118139439:-1 gene:Zm00001d037252 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 12 description:Putative LIM-type zinc finger domain family protein
Sequence	ATGTTTGTGGGCACACAAGAGAAGTGTGTTGTTTGCAACAAGACTGTGTACCCGCTTGAG AAGGTTGCTCTTAATGGAAATTCTTATCACAAATCATGCTTTCGCTGCACCCATGGTGGT TGTACGCTCAGCCCATCCAATCATATCACACATGAAGGCAAACTTTATTGCAAGACCCAC CATTCTCAACTGTTTATGGTTAAGGGAAATTTCAGTCAGTTTGAGGACAATTCTGGGAAT GCAAAAGTTACTATTGAGAAACTGCCAGAAACAGAAGAAGCCACCAAGAATCCTGATCAA GGTGATGAAGCCACAAGGAAACCGGTAGAAAATGAGCCTACAGATGAGAAAACTTCAAAA AATAATGTTGCAGCTGAGAAACAATTGCAAAGTGGTGTTGATGTCACAAAACCATCTGAG AGTACCACAGCAGAAAATGAACGAGGTACTGAGGGTGAGTCAAAGAGTAATGTTGTCAAC AAGAAGCCGTCAGAAAGTATTGTAGAAAAGCCACTACAGAACAGTGTGGTTGATGTAAAG CCATCAGGAAACAGTGCAGCCATGAGAAAACCCTGGCAACGAAGTATGCAAACAGATAAA CCGTTTCTGAGTAGCACAAGCACTGTGAATCCATCATCGAGCAGTGATACCACTGAGAAG CTATCATCAAGTAATGGGGTTGATATGAAACAGTCTGAAAGCAGCACATTAGTAAAAACA ACATGTAAACAAAATTCACCAACTGAGAATCCACCACAGAGCGTTTTACCATCGGATAAG CCATCAGCGACCAGTGTAGATGATGCAAAGCCATCAGAAAGCAGCAAAGTGATAAAAAAA CCATGGCAACGCAATATGGCTGCCGAGAAGCAATTACAGAACAGTGCACCATCACAGAAA AGTGTAGCTACTGATAAACCATCACCAACAACCGGCATGAAGTCATTAGATAACACCACA GAAGTTAAAAGTCCATGGGGGCGCAGGATGTTCAATAACAAGTCACTAAAGCGCAGTGTA GATACTGAGAAATCTTCTGAAACCAGTGTGGTTGATGTGAGACCTGGGGAAACCAGTACA GTAGCCCCTGTGCCACAGCAACAAACTGAAAATGTTGAGAAACCTTCAGCTACCAGTGCA GATGATGCGAAGAGTGCAGATGATACGAAGAGTGCAGATGATGTGAAGCCATCGGTTGCC AGTCCAGATGCGAAGAGCACAGATGATGTAAAGTCATCGGAGAATAATGCGGCAGTAGTT AGAAAGCCATGGCAACGCAACATAGGCACTGGGAAGCAACCCCTGACCACTGTAGTTGGT CCAAAGACGACTGAAACAAGTGGAACTGTCAAAAGGTTGTGGCAGCGCAGTGCTGCAACT GCATCAAAAAGTGGTACGGCTGTTGTGACACCATTGCAAAGCAGTGTGGTTGTCTCCAAG CCGTTCCAAAGCAACGTAGCTGTGAAAAAGACATGGCAAAGAAGTGTAACTCCAGAAAAC CAGCTAGAGAGTAATATGTCTAGCAATAAGCCATTGCCAAGCAAGGTGGTTGTTGAGAGT CTACTGCAAAGCAACACCGTTGAGAAAGTGTTTCAGAGTACTGTACCTACTGAGGAACCA CAGAAAGGCATCATGGCCACTGAAAATCAATCGCAGACCATCAAAGTTACAAAGAAGAGC AATGAAACATCCATGGAGCTATCAGTAACAAGTGAGACAACCAAACCGCCACCACTTGCT GCAACCGTGTTGCAAAGTGATGTTTCCACAGAACAACCATCACAAACTGATATGCCTACC ATGGCACCTAGTCAGATCCCTGAGCCCACCGAGAAGCCATCAGAAAGTGATTTTAATGCT GAGAAGTTATCAGAAAGTGTTGTTAAAGCTGAGAAGTCATCAACGACTGACACTGCTGCT GAGAAACCACTTCCAAGTATGATCACTGAGAAGGTAGAAAGTGTAGCAGGCACATTGAAG CCATCTCAAAGTGATACAGCCCTTCAGGAGATCTTAGAGAGGAATATGGCTACTGAGGAA ATACTGCAAACTGCCATGGCTGTTGAGGATGCACCTCCAACCAATTTGATCACCGAGAAG TCATTAATGAAAGATGCTTCAGAGGAGCCAGTTCAAACTAACGAACCATCTGAGCAGCCA CTGAAAACTGAAGAGATTGAGAAGCCACAACAAAGTGAAAAGATTGCTACGGACACGAGA GGGAGTGAAGTATCTACTGAGGAGATGCTAGAGCTTGAAAGTAATGCCACTAAATTAAAC AAGGATCAATCAGAACTTGAAGGGCTTTCATCTGGTAGGAATCCTCCAAACTTCCAAAGC AATCCAAATGCTGGGCAGCGATCAGAGTCCAAAGGCATTGTGGCCGAGAAGGCAGCTGAC CATATAATGGAAGCTGAAGATGATGTGGATGCTGAGCACTCATCAGAATCTCAAAGCGTT GCACCTGCTGAGGTTCGAAAGGAGCAACCATCAGAACATCAAAAGGATGTGGATATGGAG CAGCTATTGGAACCTCAAAATCAGGATCATCCTTGGAATCCACTAGATCCTGTTAGTGAT ACAGCTGCCAAGGATTCATCAGAGCCTAAAAGTGACATAGCTACAGAAAAACCTGCAGAA TCTCAAAACAATGCAGAACAGTCAGTTGAGCAGCAATCAGAACCGCAAAGCGATAAATCA ACTGAGAGGCCAGAAGTGCATCAAAGTAATACATCTAATGATGAGCTTTCTAGGCTTCAA AACGATGCAGGTACTGATAAACTATCAGTACAGTCATCAGATCCTGAGAGCAATGCATCT GTCAGTAAGCCATCAGAGTCTCAAACTGATGTGGCTACCATGGAGGCACTGGAACCTCAA ATTGATGCTCCTCCTGATAAGGCAACTGACCAGCCAGTGAAACCTCAAGATGATGCATCT GCTAAGAATCCAATGGGAACTGAAAGTGATGCTGTTTGTGATAAACCTTCAGAAAGCAGC TCAGATACTGAAACACTTCTTGTATGCCATCAGAACAGCAGCATAACCACTGATGAACCT GTACAAGGTGGCATTTCTTATGATACACCACATCAGAGAAGTGCACCCATAGAAACAACA CCAGGAAGTGAAACAGTTGTTGACGATTGCATACATCACGAAGATACCAGCAGCAAACCA TCAGAGGAAAACAAAGCTATTGAGGAGCCAGAAGAGGTGAGTGCCAAGCTGCCAGATGAC CATGTAACTTCTGAGAAGTCGTCAGAGGAAGACAAAGAAAACGCAGAGGCATCAGTAGAC AGTGCTCCCCTGGGGAACCCATTGGAGGTCAATGAGGAGAGCTCCAATCCTTCAGGGGAT ACTGTAACTCCTGAGAAGCCACTGGAGGAGGATAAGACGAGCGCAGAGCCATCAGAAAGC GATGCATCCTTTGGGAAAATATTGGAGGCCGATGAAGTGAGTGCCAACCCATCAGAGGAT ATTGCAACTCCTGAGAAGCCACTGGAGGAAGGTGTGGGAAGTGTGGAACCATCAGAAGAC AATTCTGTTCTTGATAAACCATTGGAGGAAGAAGAGGTTGATGCCAAACCGGTGAAGGAC GTTGTAACTCCCGAGAAGCCATTGGAGGAAGGCTCAACAACTGCAGAGCCATTAGAAGAC AATGCTGCCCATGAGGAAGCAAAAGAAGAAGATGAGGTGATTGCCAAGCCCCTGTCCAGT GTGGCACTTGAGAAGTCACTGGAGGGAAGTGAGGCAAGTGTAGAGCCATCGGAAGACAAT GCTGCTCTTGAGAAACCATCGGAGGACGACGAGGCAAATGCCAAGTCATCAGAGGACAGT GTATATGTGGAGAAGCCACAACAGGAAGAAGATGACAACGGTGTCAAGGCATTAGAGGAG GGCGTGTCCCCTGAGAAATCAGCCGCTGGCAAACCATTAGAAGAAGACCCAGTCCATGAG AAGCCAGCGGACGCAGTAGCTGAGCCGTCATCTCAGGACGACACTGCCACTGAAAAGCCC TCAGCTACAACTGACACTGCAGAAACTGCATGA

Peptide Sequence

PEP ID	Zm00001d037252_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:6:118129961:118139439:-1 gene:Zm00001d037252 transcript:Zm00001d037252_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 12 description:Putative LIM-type zinc finger domain family protein
Sequence	MFVGTQEKCVVCNKTVYPLEKVALNGNSYHKSCFRCTHGGCTLSPSNHITHEGKLYCKTH HSQLFMVKGNFSQFEDNSGNAKVTIEKLPETEEATKNPDQGDEATRKPVENEPTDEKTSK NNVAAEKQLQSGVDVTKPSESTTAENERGTEGESKSNVVNKKPSESIVEKPLQNSVVDVK PSGNSAAMRKPWQRSMQTDKPFLSSTSTVNPSSSSDTTEKLSSSNGVDMKQSESSTLVKT TCKQNSPTENPPQSVLPSDKPSATSVDDAKPSESSKVIKKPWQRNMAAEKQLQNSAPSQK SVATDKPSPTTGMKSLDNTTEVKSPWGRRMFNNKSLKRSVDTEKSSETSVVDVRPGETST VAPVPQQQTENVEKPSATSADDAKSADDTKSADDVKPSVASPDAKSTDDVKSSENNAAVV RKPWQRNIGTGKQPLTTVVGPKTTETSGTVKRLWQRSAATASKSGTAVVTPLQSSVVVSK PFQSNVAVKKTWQRSVTPENQLESNMSSNKPLPSKVVVESLLQSNTVEKVFQSTVPTEEP QKGIMATENQSQTIKVTKKSNETSMELSVTSETTKPPPLAATVLQSDVSTEQPSQTDMPT MAPSQIPEPTEKPSESDFNAEKLSESVVKAEKSSTTDTAAEKPLPSMITEKVESVAGTLK PSQSDTALQEILERNMATEEILQTAMAVEDAPPTNLITEKSLMKDASEEPVQTNEPSEQP LKTEEIEKPQQSEKIATDTRGSEVSTEEMLELESNATKLNKDQSELEGLSSGRNPPNFQS NPNAGQRSESKGIVAEKAADHIMEAEDDVDAEHSSESQSVAPAEVRKEQPSEHQKDVDME QLLEPQNQDHPWNPLDPVSDTAAKDSSEPKSDIATEKPAESQNNAEQSVEQQSEPQSDKS TERPEVHQSNTSNDELSRLQNDAGTDKLSVQSSDPESNASVSKPSESQTDVATMEALEPQ IDAPPDKATDQPVKPQDDASAKNPMGTESDAVCDKPSESSSDTETLLVCHQNSSITTDEP VQGGISYDTPHQRSAPIETTPGSETVVDDCIHHEDTSSKPSEENKAIEEPEEVSAKLPDD HVTSEKSSEEDKENAEASVDSAPLGNPLEVNEESSNPSGDTVTPEKPLEEDKTSAEPSES DASFGKILEADEVSANPSEDIATPEKPLEEGVGSVEPSEDNSVLDKPLEEEEVDAKPVKD VVTPEKPLEEGSTTAEPLEDNAAHEEAKEEDEVIAKPLSSVALEKSLEGSEASVEPSEDN AALEKPSEDDEANAKSSEDSVYVEKPQQEEDDNGVKALEEGVSPEKSAAGKPLEEDPVHE KPADAVAEPSSQDDTATEKPSATTDTAETA

Transcript Sequence

Transcript ID	Zm00001d037252_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:118129961:118139439:-1 gene:Zm00001d037252 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 12 description:Putative LIM-type zinc finger domain family protein
Sequence	GCGCGTTGAATTTGTACTGGTTCTTGCTTCACAGCGAACTGGGTACAAGAACAAGTCGTA AATAGGGAGTACACAGGGTACAAAAATTTGCTGTTTCATCTCAGCAAGGGTGCGCCATCA GTGAACTTTTCTCTTGCAACCACCTGGCAAATTTAGTAATTATTCTTCCGTGGAAGGTGT CCTATACTGCAAGCCTCACTATGACCAGATATTAAAATCAACAGGCAGTTTGGAGAAAAG TTTTGAAGGTGTGGCCCGATCAGCTAAGTCAGAAAAATCAAATGGACATAAGGGCCAACA AAGCAGTAGATTCTCTAATATGTTTGTGGGCACACAAGAGAAGTGTGTTGTTTGCAACAA GACTGTGTACCCGCTTGAGAAGGTTGCTCTTAATGGAAATTCTTATCACAAATCATGCTT TCGCTGCACCCATGGTGGTTGTACGCTCAGCCCATCCAATCATATCACACATGAAGGCAA ACTTTATTGCAAGACCCACCATTCTCAACTGTTTATGGTTAAGGGAAATTTCAGTCAGTT TGAGGACAATTCTGGGAATGCAAAAGTTACTATTGAGAAACTGCCAGAAACAGAAGAAGC CACCAAGAATCCTGATCAAGGTGATGAAGCCACAAGGAAACCGGTAGAAAATGAGCCTAC AGATGAGAAAACTTCAAAAAATAATGTTGCAGCTGAGAAACAATTGCAAAGTGGTGTTGA TGTCACAAAACCATCTGAGAGTACCACAGCAGAAAATGAACGAGGTACTGAGGGTGAGTC AAAGAGTAATGTTGTCAACAAGAAGCCGTCAGAAAGTATTGTAGAAAAGCCACTACAGAA CAGTGTGGTTGATGTAAAGCCATCAGGAAACAGTGCAGCCATGAGAAAACCCTGGCAACG AAGTATGCAAACAGATAAACCGTTTCTGAGTAGCACAAGCACTGTGAATCCATCATCGAG CAGTGATACCACTGAGAAGCTATCATCAAGTAATGGGGTTGATATGAAACAGTCTGAAAG CAGCACATTAGTAAAAACAACATGTAAACAAAATTCACCAACTGAGAATCCACCACAGAG CGTTTTACCATCGGATAAGCCATCAGCGACCAGTGTAGATGATGCAAAGCCATCAGAAAG CAGCAAAGTGATAAAAAAACCATGGCAACGCAATATGGCTGCCGAGAAGCAATTACAGAA CAGTGCACCATCACAGAAAAGTGTAGCTACTGATAAACCATCACCAACAACCGGCATGAA GTCATTAGATAACACCACAGAAGTTAAAAGTCCATGGGGGCGCAGGATGTTCAATAACAA GTCACTAAAGCGCAGTGTAGATACTGAGAAATCTTCTGAAACCAGTGTGGTTGATGTGAG ACCTGGGGAAACCAGTACAGTAGCCCCTGTGCCACAGCAACAAACTGAAAATGTTGAGAA ACCTTCAGCTACCAGTGCAGATGATGCGAAGAGTGCAGATGATACGAAGAGTGCAGATGA TGTGAAGCCATCGGTTGCCAGTCCAGATGCGAAGAGCACAGATGATGTAAAGTCATCGGA GAATAATGCGGCAGTAGTTAGAAAGCCATGGCAACGCAACATAGGCACTGGGAAGCAACC CCTGACCACTGTAGTTGGTCCAAAGACGACTGAAACAAGTGGAACTGTCAAAAGGTTGTG GCAGCGCAGTGCTGCAACTGCATCAAAAAGTGGTACGGCTGTTGTGACACCATTGCAAAG CAGTGTGGTTGTCTCCAAGCCGTTCCAAAGCAACGTAGCTGTGAAAAAGACATGGCAAAG AAGTGTAACTCCAGAAAACCAGCTAGAGAGTAATATGTCTAGCAATAAGCCATTGCCAAG CAAGGTGGTTGTTGAGAGTCTACTGCAAAGCAACACCGTTGAGAAAGTGTTTCAGAGTAC TGTACCTACTGAGGAACCACAGAAAGGCATCATGGCCACTGAAAATCAATCGCAGACCAT CAAAGTTACAAAGAAGAGCAATGAAACATCCATGGAGCTATCAGTAACAAGTGAGACAAC CAAACCGCCACCACTTGCTGCAACCGTGTTGCAAAGTGATGTTTCCACAGAACAACCATC ACAAACTGATATGCCTACCATGGCACCTAGTCAGATCCCTGAGCCCACCGAGAAGCCATC AGAAAGTGATTTTAATGCTGAGAAGTTATCAGAAAGTGTTGTTAAAGCTGAGAAGTCATC AACGACTGACACTGCTGCTGAGAAACCACTTCCAAGTATGATCACTGAGAAGGTAGAAAG TGTAGCAGGCACATTGAAGCCATCTCAAAGTGATACAGCCCTTCAGGAGATCTTAGAGAG GAATATGGCTACTGAGGAAATACTGCAAACTGCCATGGCTGTTGAGGATGCACCTCCAAC CAATTTGATCACCGAGAAGTCATTAATGAAAGATGCTTCAGAGGAGCCAGTTCAAACTAA CGAACCATCTGAGCAGCCACTGAAAACTGAAGAGATTGAGAAGCCACAACAAAGTGAAAA GATTGCTACGGACACGAGAGGGAGTGAAGTATCTACTGAGGAGATGCTAGAGCTTGAAAG TAATGCCACTAAATTAAACAAGGATCAATCAGAACTTGAAGGGCTTTCATCTGGTAGGAA TCCTCCAAACTTCCAAAGCAATCCAAATGCTGGGCAGCGATCAGAGTCCAAAGGCATTGT GGCCGAGAAGGCAGCTGACCATATAATGGAAGCTGAAGATGATGTGGATGCTGAGCACTC ATCAGAATCTCAAAGCGTTGCACCTGCTGAGGTTCGAAAGGAGCAACCATCAGAACATCA AAAGGATGTGGATATGGAGCAGCTATTGGAACCTCAAAATCAGGATCATCCTTGGAATCC ACTAGATCCTGTTAGTGATACAGCTGCCAAGGATTCATCAGAGCCTAAAAGTGACATAGC TACAGAAAAACCTGCAGAATCTCAAAACAATGCAGAACAGTCAGTTGAGCAGCAATCAGA ACCGCAAAGCGATAAATCAACTGAGAGGCCAGAAGTGCATCAAAGTAATACATCTAATGA TGAGCTTTCTAGGCTTCAAAACGATGCAGGTACTGATAAACTATCAGTACAGTCATCAGA TCCTGAGAGCAATGCATCTGTCAGTAAGCCATCAGAGTCTCAAACTGATGTGGCTACCAT GGAGGCACTGGAACCTCAAATTGATGCTCCTCCTGATAAGGCAACTGACCAGCCAGTGAA ACCTCAAGATGATGCATCTGCTAAGAATCCAATGGGAACTGAAAGTGATGCTGTTTGTGA TAAACCTTCAGAAAGCAGCTCAGATACTGAAACACTTCTTGTATGCCATCAGAACAGCAG CATAACCACTGATGAACCTGTACAAGGTGGCATTTCTTATGATACACCACATCAGAGAAG TGCACCCATAGAAACAACACCAGGAAGTGAAACAGTTGTTGACGATTGCATACATCACGA AGATACCAGCAGCAAACCATCAGAGGAAAACAAAGCTATTGAGGAGCCAGAAGAGGTGAG TGCCAAGCTGCCAGATGACCATGTAACTTCTGAGAAGTCGTCAGAGGAAGACAAAGAAAA CGCAGAGGCATCAGTAGACAGTGCTCCCCTGGGGAACCCATTGGAGGTCAATGAGGAGAG CTCCAATCCTTCAGGGGATACTGTAACTCCTGAGAAGCCACTGGAGGAGGATAAGACGAG CGCAGAGCCATCAGAAAGCGATGCATCCTTTGGGAAAATATTGGAGGCCGATGAAGTGAG TGCCAACCCATCAGAGGATATTGCAACTCCTGAGAAGCCACTGGAGGAAGGTGTGGGAAG TGTGGAACCATCAGAAGACAATTCTGTTCTTGATAAACCATTGGAGGAAGAAGAGGTTGA TGCCAAACCGGTGAAGGACGTTGTAACTCCCGAGAAGCCATTGGAGGAAGGCTCAACAAC TGCAGAGCCATTAGAAGACAATGCTGCCCATGAGGAAGCAAAAGAAGAAGATGAGGTGAT TGCCAAGCCCCTGTCCAGTGTGGCACTTGAGAAGTCACTGGAGGGAAGTGAGGCAAGTGT AGAGCCATCGGAAGACAATGCTGCTCTTGAGAAACCATCGGAGGACGACGAGGCAAATGC CAAGTCATCAGAGGACAGTGTATATGTGGAGAAGCCACAACAGGAAGAAGATGACAACGG TGTCAAGGCATTAGAGGAGGGCGTGTCCCCTGAGAAATCAGCCGCTGGCAAACCATTAGA AGAAGACCCAGTCCATGAGAAGCCAGCGGACGCAGTAGCTGAGCCGTCATCTCAGGACGA CACTGCCACTGAAAAGCCCTCAGCTACAACTGACACTGCAGAAACTGCATGAGACATCAG TTAGCTGGTTAAAGTTAGTTAGCAACAGTTTTAAACGGAGTGTGGATCGAATACTATTGG TCATAGTTCGGCGTGGCTTCTGTTTGTTTTTTTTTTTGGTGGGGTGGGGGTGGGGTATAA TGCTTGAGTTGTAAAATTTGAGGGAAAGAAACTATAGTATTGATTTGGTTTTTTTACAAG CAATAATCCCCTCCTCCACATGTTAGGAGGAGGATACCATTGAAGTTCTATACATAGGAT TTGTGTGCGGTTTGATTTTTTGTTTGGAAGTTGTACTTTGTAATCGATTTTGTGCAAATA TGACTGTGCTTGC