Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037232_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:116994052:116996499:-1 gene:Zm00001d037232 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 6 chloroplastic
Sequence

ATGTCGCCGACGACCATGTCCCTGACGACCACGACGAGCCGCCTGCCCATCTGCCGGGCA
CGGGACGTGTCCAAGCAGGCGCCTCCAGCTGCCAAGGCCGCGCCTCCTCCGTCGCCGTCA
GACACCAACGGTTTTAGCAGGAGGAGGCTGCTGCGGTCCGCGGCGCTGGGTTTCGGGCTC
GGTCTCGCCAGGAGAGACCCAGCGCGGGCGCGCGCCGAGACGACGCCGCCATCACCCGCG
CTGGCGCCGGAGGAGGTGACATCGAACCGGATGTCCTACTCGCGGTTCCTGGATTACCTC
AACGCCAACGCGGTGCGGAAGGTGGACTTCTTCGAGAACGGCACGGTGGCCGTCGTCGAG
CTGGACGACCCGGCGCTGGCGTCGAGAGTGCACCGGGTGCGGGTGCAGCTCCCGGCCGGG
GGCCTCCCAGCGGAGCTGGTGCGTAAGCTGCGGGACAGGGGCGTCGACTTCGCGGCGCAC
CCCGTGGAACCCAACCTCGGGCTCATGTTCCTCGACCTCCTCCTCAACTTCGGCTTCCCG
CTCCTCTTCCTCGCCTCGCTGATCTGGAGGTCGGTCACCATGAACAACCCTGGCGCTGGC
GGCGGGGGGCCCAACCTCCCGTTCGGGCTCGGCAGGTCCAAGGCCAAGTTCCAGATGGAG
CCCAACACCGGGATCACGTTCGACGACGTCGCCGGCGTGGACGAGGCCAAGCAGGACTTC
CAGGAGATCGTGCAGTTCTTGAAGTCGCCGGAGAAGTTCACGGCGGTGGGTGCGAGGATC
CCCAAGGGCGTGCTGCTGGTGGGCCCGCCGGGCACGGGGAAGACGCTGCTGGCCAAGGCC
ATCGCGGGGGAGGCAGGCGTGCCTTTCTTCTCTCTGTCCGGGTCCGAGTTCATCGAGATG
TTCGTCGGCGTGGGCGCGTCGCGGGTGCGGGACCTCTTCAACAAGGCCAAGGCCAACGCG
CCGTGCCTCGTCTTCATCGACGAGATCGACGCCGTGGGCCGCCAGCGCGGCACGGGCATC
GGCGGGGGCAACGACGAGCGGGAGCAGACGCTGAACCAGCTGCTGACGGAGATGGACGGG
TTCAGCGGGGACAGCGGAGTCGTCGTCATCGCGGCCACGAACCGGCCTGACATCCTCGAC
GCCGCGCTGCTCCGCCCGGGCCGCTTCGACCGCCAGGTCAGCGTCGGGCTCCCTGACGTC
CGCGGGCGGGAGGAGATCCTCAGGGTACACAGCTCCAACAAGAGGCTGGACCCCGACGTG
TCGCTCAGCGTCGTGGCCATGCGCACCCCCGGCTTCAGCGGCGCCGACCTTGCCAACCTT
ATGAATGAGGCTGCCATCCTTGCCGGCCGCCGCGGCAAGGACCGCATCGGTGTCAAGGAG
ATCGATGACTCCATCGACCGCATCGTTGCCGGCCTCGAGGGCACAAGCATGACCGACGGC
AAGAGCAAGCTGCTTGTTGCCTACCACGAGATCGGCCACGCCGTGTGCGCGACGCTGACG
CCGGGGCACGACGCGGTGCAGAAGGTGACACTGATCCCACGGGGGCAGTCGCGAGGGCTG
ACGTGGTTCCTGCCGGGCGAGGACCCGACCCTGGTGTCCAAGCAGCAGATCTTCGCGCGC
ATCGTGGGCGGGCTCGGCGGGCGCGCCGCTGAGGAGGTGATCTTCGGGGAGCCCGAGGTG
ACGACGGGCGCGGCGGGCGACCTGCAGCAGGTGACGCAGGTGGCGCGGCAGATGGTGACC
ACGTTCGGGATGTCGGAGATCGGGCCGTGGGCGCTCATGGAGCCGGCTGCGCAGAGCGGC
GACGTCGTGCTGCGGATGCTGGCCCGGAACTCCATCTCCGAGAAGCTCGCAGCGGACATC
GACAGGGCCGCGAAGCACATCATCGACCAGGCGTACGAGGTCGCCAAGGAGCATGTCAGG
AGGAACCGCGCGGCCATCGACCAGCTGGTGGACGTGCTTATGGAGAAGGAGACGCTCACC
GGCGACGAGTTCAGGGCGCTCTTGTCGGAGCACGTGGACATTGGCAGGGAGCAGAGGGAA
ACAGCGGCCCGGAAAAAGCTGGTCGTCACCGCTTGA

Peptide Sequence

PEP ID

Zm00001d037232_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:116994052:116996499:-1 gene:Zm00001d037232 transcript:Zm00001d037232_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 6 chloroplastic
Sequence

MSPTTMSLTTTTSRLPICRARDVSKQAPPAAKAAPPPSPSDTNGFSRRRLLRSAALGFGL
GLARRDPARARAETTPPSPALAPEEVTSNRMSYSRFLDYLNANAVRKVDFFENGTVAVVE
LDDPALASRVHRVRVQLPAGGLPAELVRKLRDRGVDFAAHPVEPNLGLMFLDLLLNFGFP
LLFLASLIWRSVTMNNPGAGGGGPNLPFGLGRSKAKFQMEPNTGITFDDVAGVDEAKQDF
QEIVQFLKSPEKFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEM
FVGVGASRVRDLFNKAKANAPCLVFIDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDG
FSGDSGVVVIAATNRPDILDAALLRPGRFDRQVSVGLPDVRGREEILRVHSSNKRLDPDV
SLSVVAMRTPGFSGADLANLMNEAAILAGRRGKDRIGVKEIDDSIDRIVAGLEGTSMTDG
KSKLLVAYHEIGHAVCATLTPGHDAVQKVTLIPRGQSRGLTWFLPGEDPTLVSKQQIFAR
IVGGLGGRAAEEVIFGEPEVTTGAAGDLQQVTQVARQMVTTFGMSEIGPWALMEPAAQSG
DVVLRMLARNSISEKLAADIDRAAKHIIDQAYEVAKEHVRRNRAAIDQLVDVLMEKETLT
GDEFRALLSEHVDIGREQRETAARKKLVVTA

Transcript Sequence

Transcript ID

Zm00001d037232_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:116994052:116996499:-1 gene:Zm00001d037232 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP-dependent zinc metalloprotease FTSH 6 chloroplastic
Sequence

ACACGGCACTGCACTGCACTGCAATTTTGCATCGCTTCAGTAACCAATTAACGCAAGAAA
CAGGTAGTAGATCAAGTCCGATTAGTTGCTGATGTCGCCGACGACCATGTCCCTGACGAC
CACGACGAGCCGCCTGCCCATCTGCCGGGCACGGGACGTGTCCAAGCAGGCGCCTCCAGC
TGCCAAGGCCGCGCCTCCTCCGTCGCCGTCAGACACCAACGGTTTTAGCAGGAGGAGGCT
GCTGCGGTCCGCGGCGCTGGGTTTCGGGCTCGGTCTCGCCAGGAGAGACCCAGCGCGGGC
GCGCGCCGAGACGACGCCGCCATCACCCGCGCTGGCGCCGGAGGAGGTGACATCGAACCG
GATGTCCTACTCGCGGTTCCTGGATTACCTCAACGCCAACGCGGTGCGGAAGGTGGACTT
CTTCGAGAACGGCACGGTGGCCGTCGTCGAGCTGGACGACCCGGCGCTGGCGTCGAGAGT
GCACCGGGTGCGGGTGCAGCTCCCGGCCGGGGGCCTCCCAGCGGAGCTGGTGCGTAAGCT
GCGGGACAGGGGCGTCGACTTCGCGGCGCACCCCGTGGAACCCAACCTCGGGCTCATGTT
CCTCGACCTCCTCCTCAACTTCGGCTTCCCGCTCCTCTTCCTCGCCTCGCTGATCTGGAG
GTCGGTCACCATGAACAACCCTGGCGCTGGCGGCGGGGGGCCCAACCTCCCGTTCGGGCT
CGGCAGGTCCAAGGCCAAGTTCCAGATGGAGCCCAACACCGGGATCACGTTCGACGACGT
CGCCGGCGTGGACGAGGCCAAGCAGGACTTCCAGGAGATCGTGCAGTTCTTGAAGTCGCC
GGAGAAGTTCACGGCGGTGGGTGCGAGGATCCCCAAGGGCGTGCTGCTGGTGGGCCCGCC
GGGCACGGGGAAGACGCTGCTGGCCAAGGCCATCGCGGGGGAGGCAGGCGTGCCTTTCTT
CTCTCTGTCCGGGTCCGAGTTCATCGAGATGTTCGTCGGCGTGGGCGCGTCGCGGGTGCG
GGACCTCTTCAACAAGGCCAAGGCCAACGCGCCGTGCCTCGTCTTCATCGACGAGATCGA
CGCCGTGGGCCGCCAGCGCGGCACGGGCATCGGCGGGGGCAACGACGAGCGGGAGCAGAC
GCTGAACCAGCTGCTGACGGAGATGGACGGGTTCAGCGGGGACAGCGGAGTCGTCGTCAT
CGCGGCCACGAACCGGCCTGACATCCTCGACGCCGCGCTGCTCCGCCCGGGCCGCTTCGA
CCGCCAGGTCAGCGTCGGGCTCCCTGACGTCCGCGGGCGGGAGGAGATCCTCAGGGTACA
CAGCTCCAACAAGAGGCTGGACCCCGACGTGTCGCTCAGCGTCGTGGCCATGCGCACCCC
CGGCTTCAGCGGCGCCGACCTTGCCAACCTTATGAATGAGGCTGCCATCCTTGCCGGCCG
CCGCGGCAAGGACCGCATCGGTGTCAAGGAGATCGATGACTCCATCGACCGCATCGTTGC
CGGCCTCGAGGGCACAAGCATGACCGACGGCAAGAGCAAGCTGCTTGTTGCCTACCACGA
GATCGGCCACGCCGTGTGCGCGACGCTGACGCCGGGGCACGACGCGGTGCAGAAGGTGAC
ACTGATCCCACGGGGGCAGTCGCGAGGGCTGACGTGGTTCCTGCCGGGCGAGGACCCGAC
CCTGGTGTCCAAGCAGCAGATCTTCGCGCGCATCGTGGGCGGGCTCGGCGGGCGCGCCGC
TGAGGAGGTGATCTTCGGGGAGCCCGAGGTGACGACGGGCGCGGCGGGCGACCTGCAGCA
GGTGACGCAGGTGGCGCGGCAGATGGTGACCACGTTCGGGATGTCGGAGATCGGGCCGTG
GGCGCTCATGGAGCCGGCTGCGCAGAGCGGCGACGTCGTGCTGCGGATGCTGGCCCGGAA
CTCCATCTCCGAGAAGCTCGCAGCGGACATCGACAGGGCCGCGAAGCACATCATCGACCA
GGCGTACGAGGTCGCCAAGGAGCATGTCAGGAGGAACCGCGCGGCCATCGACCAGCTGGT
GGACGTGCTTATGGAGAAGGAGACGCTCACCGGCGACGAGTTCAGGGCGCTCTTGTCGGA
GCACGTGGACATTGGCAGGGAGCAGAGGGAAACAGCGGCCCGGAAAAAGCTGGTCGTCAC
CGCTTGAAGCTTCACTGTAGTCCTTTGTAGTGTAGAAATATATAGGGGCAGCATAGCATA
GTGCAAATATGCAGTAGTATGTTGTACTTAGACACTTGATAGTATCAGCACATAGTACTG
TATATGCATGGTAAACTTTTTTCCAGGGAACAAAACCGAAATCTGAAGCACATGAATTTC
CGC