Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037225_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:116559187:116561921:-1 gene:Zm00001d037225 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	ATGGCGTTTGCGGTCTCCGACGAGCTGCTGGGCACCTTCGTGCCGATTGCGGTGTACTGG CTCTACTCGGGGCTCTACGTCGTCCTGGACGGGCTGGGGATGGACGACTACAGGCTCCAC CCCAAGGGGGAGGAGGCCAGGAACATCGTTTCCAGGTGGACGGTCGTCAGGGGCGTCCTT GTTCAGCAGGCGTTTCAAATCGCTGTCTCCCTTCTTCTCTTCACGGTTCTTGGTGATGAT AATGGGACTGTGAGGAAGCAGCCTCCAGCTTTGGTAATGGCATTGCAATTCCTCATTGCA ATGTTTGTCATGGACACATGGCAGTACTTCATGCACAGATACATGCATATCAACAGATTC TTGTACAAGCACGTCCACTCTAAGCACCACACTCTTGTCGTCCCCTACGCCTTTGGAGCT CTTTACAACCACCCCCTGGAGGGGCTCATCCTGGACACCGTCGGCGGCGCGCTCTCGTTC CTCATCTCTGGCATGACCCCAAGGATTGGGATTTTCTTCTTCTCGTTTGCGACCATCAAG ACCGTCGATGACCACTGTGGTCTGTGGCTTCCTGGAAACATCCTCCATGTATTCTTCAGC AACAACAGCGCTTACCATGACATCCACCATCAGCTCTACGGGAACAAGTACAACTTCTCG CAGCCCTTCTTTGTCATGTGGGACAAGATCCTCGGAACATACATGCCTTACACTCTGGAG ACACGCAAGGGAGGTGGGTTTGAGGCACGCCCGGTTAAGCTCGACCAAGCACAGCAGATC AAGGCTGATTAA

Peptide Sequence

PEP ID	Zm00001d037225_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:116559187:116561921:-1 gene:Zm00001d037225 transcript:Zm00001d037225_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	MAFAVSDELLGTFVPIAVYWLYSGLYVVLDGLGMDDYRLHPKGEEARNIVSRWTVVRGVL VQQAFQIAVSLLLFTVLGDDNGTVRKQPPALVMALQFLIAMFVMDTWQYFMHRYMHINRF LYKHVHSKHHTLVVPYAFGALYNHPLEGLILDTVGGALSFLISGMTPRIGIFFFSFATIK TVDDHCGLWLPGNILHVFFSNNSAYHDIHHQLYGNKYNFSQPFFVMWDKILGTYMPYTLE TRKGGGFEARPVKLDQAQQIKAD

Transcript Sequence

Transcript ID	Zm00001d037225_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:116559187:116561921:-1 gene:Zm00001d037225 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sphinganine C4-monooxygenase 1
Sequence	GCAACGCGCAGAGGTGTGCCGTGTGCGCGACTAGCCATCTTCTCCCTCGGTCTTTCCGTT CTCTAACGCCTGGACGGAACTGAAGCCAGCCGGGGTGACTGGAGACCAGTAAAATCTCCC CAGGGCCGCCCAGTCGACGGTCTCGCCGGCCTTCTCAGACCACAAACATTGCGCTTGCGG CTTGCCGCCCAGCTATATAAGTACTCTCGGGAATAGGCGGTCACTCATCCATCCCATCTC CATCTCGGAGCAAAGGCAATCCAGCAAGAGTCGCTCCTTTCCCTTTTCGGGATACAGCCA GCAGAAGCAATCCGGCTAACAAGTTTCTTCTTCTTCTTCTTTCCTGGTGACGGTCGCAGG GCTCACCGAAGTGACGATGGCGTTTGCGGTCTCCGACGAGCTGCTGGGCACCTTCGTGCC GATTGCGGTGTACTGGCTCTACTCGGGGCTCTACGTCGTCCTGGACGGGCTGGGGATGGA CGACTACAGGCTCCACCCCAAGGGGGAGGAGGCCAGGAACATCGTTTCCAGGTGGACGGT CGTCAGGGGCGTCCTTGTTCAGCAGGCGTTTCAAATCGCTGTCTCCCTTCTTCTCTTCAC GGTTCTTGGTGATGATAATGGGACTGTGAGGAAGCAGCCTCCAGCTTTGGTAATGGCATT GCAATTCCTCATTGCAATGTTTGTCATGGACACATGGCAGTACTTCATGCACAGATACAT GCATATCAACAGATTCTTGTACAAGCACGTCCACTCTAAGCACCACACTCTTGTCGTCCC CTACGCCTTTGGAGCTCTTTACAACCACCCCCTGGAGGGGCTCATCCTGGACACCGTCGG CGGCGCGCTCTCGTTCCTCATCTCTGGCATGACCCCAAGGATTGGGATTTTCTTCTTCTC GTTTGCGACCATCAAGACCGTCGATGACCACTGTGGTCTGTGGCTTCCTGGAAACATCCT CCATGTATTCTTCAGCAACAACAGCGCTTACCATGACATCCACCATCAGCTCTACGGGAA CAAGTACAACTTCTCGCAGCCCTTCTTTGTCATGTGGGACAAGATCCTCGGAACATACAT GCCTTACACTCTGGAGACACGCAAGGGAGGTGGGTTTGAGGCACGCCCGGTTAAGCTCGA CCAAGCACAGCAGATCAAGGCTGATTAAGCAGCGCGGTTTCTCCTGTTTATCTACTACTT CCCCTGTTTTTTTTCCTTCTAACTGCATTTGTACTGTAGAGGTATTTTCCTGTCCATATA GTAAAATCCTTTAGGCAGATGACATGTTGTACCCAAAAGATGTAGCAAATGAAACATCTT GCTAATGAAGATCCATTGGGGTTTGTTTC