Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037189_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:6:115183253:115189338:1 gene:Zm00001d037189 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase CYP40
Sequence

ATGGAGGGCCGCGGCGCGGAACAAGCACCCGAGGCGGCGGCGGAGGTGAAAAATCCGAGG
TGCTTCATGGACGTCACCATCGGCGGCGAGATGGAGGGGAGGATCGTTGTAGAGCTCTAC
GCTTCCGTGGTACCGCGGACGGCGGAGAACTTCCGCGCGCTCTGCACAGGGGAGAAAGGC
ATCGGCGCCGCCAGCGGCAAGCCGCTTCACTTTAAGGGCTCATGCTTCCACCGTGTTATT
AAAGGGTTTATGATTCAAGGGGGAGACACAACTGCTGGAGACGGAACTGGGGGAGAGTCA
ATTTATGGGTCCAAATTTGAGGACGAGAATTTTGTTTTAAAGCATGAGAGGAAAGGAATG
CTTTCAATGGCTAATTCTGGTCCCAACACAAATGGTTCTCAGTTTTTCATCACTACTACA
CGGACACCTCATTTAGACGGGAAACATGTTGTTTTTGGTAGAGTGATGAAAGGAATGGGG
GTAGTTCGCTCTATTGAGCATGTTTCTGTCGGAGAAGCTGACTGCCCCACTCTTGAAGTT
AAAATTGTTGATTGTGGGGAGCTTCCTGAAGGTGCTGATGATGGAGTTGTAAACTTTTTC
AAAGATGGTGATACGTACCCAGATTGGCCCAATGATCTTGAAGAGAAGCCTGCTGAGGTT
TCATGGTGGATGGATGCTGTGGAGTCTGCTAAAGCTTATGGGAATGACAATTTCAAGAAA
CAGGACTACAAGGCAGCTCTCAGAAAGTACAGGAAAGCTCTGCGCTACTTGGATCTTTGC
TGGGAGAAAGAAGAGATAGATGAAGATAAGAGCACAGCACTGCGGAAGACCAAGTCAATA
ATACTCACTAATAGCTCCGCATGCAAATTAAAGTTAGGAGATTCAAGTGGGGCTTTATTA
GACGCAGATTTTGCACTGCGTGAAAGGGAGGGAAATGCTAAAGCTTTTTTCCGACAAGGA
CAGGTTGGCAACTTTTGTCATATAATTTGTTTTGCTGTTGACTACATGCTGCCGGTGACA
TTCTAG

Peptide Sequence

PEP ID

Zm00001d037189_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:6:115183253:115189338:1 gene:Zm00001d037189 transcript:Zm00001d037189_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase CYP40
Sequence

MEGRGAEQAPEAAAEVKNPRCFMDVTIGGEMEGRIVVELYASVVPRTAENFRALCTGEKG
IGAASGKPLHFKGSCFHRVIKGFMIQGGDTTAGDGTGGESIYGSKFEDENFVLKHERKGM
LSMANSGPNTNGSQFFITTTRTPHLDGKHVVFGRVMKGMGVVRSIEHVSVGEADCPTLEV
KIVDCGELPEGADDGVVNFFKDGDTYPDWPNDLEEKPAEVSWWMDAVESAKAYGNDNFKK
QDYKAALRKYRKALRYLDLCWEKEEIDEDKSTALRKTKSIILTNSSACKLKLGDSSGALL
DADFALREREGNAKAFFRQGQVGNFCHIICFAVDYMLPVTF

Transcript Sequence

Transcript ID

Zm00001d037189_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:115183253:115189338:1 gene:Zm00001d037189 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidyl-prolyl cis-trans isomerase CYP40
Sequence

GAAGGTTCCACCAAGCCTCTCGGCTAGGGTTTGGGGACTTTGGGGGCGATCGCAATGGAG
GGCCGCGGCGCGGAACAAGCACCCGAGGCGGCGGCGGAGGTGAAAAATCCGAGGTGCTTC
ATGGACGTCACCATCGGCGGCGAGATGGAGGGGAGGATCGTTGTAGAGCTCTACGCTTCC
GTGGTACCGCGGACGGCGGAGAACTTCCGCGCGCTCTGCACAGGGGAGAAAGGCATCGGC
GCCGCCAGCGGCAAGCCGCTTCACTTTAAGGGCTCATGCTTCCACCGTGTTATTAAAGGG
TTTATGATTCAAGGGGGAGACACAACTGCTGGAGACGGAACTGGGGGAGAGTCAATTTAT
GGGTCCAAATTTGAGGACGAGAATTTTGTTTTAAAGCATGAGAGGAAAGGAATGCTTTCA
ATGGCTAATTCTGGTCCCAACACAAATGGTTCTCAGTTTTTCATCACTACTACACGGACA
CCTCATTTAGACGGGAAACATGTTGTTTTTGGTAGAGTGATGAAAGGAATGGGGGTAGTT
CGCTCTATTGAGCATGTTTCTGTCGGAGAAGCTGACTGCCCCACTCTTGAAGTTAAAATT
GTTGATTGTGGGGAGCTTCCTGAAGGTGCTGATGATGGAGTTGTAAACTTTTTCAAAGAT
GGTGATACGTACCCAGATTGGCCCAATGATCTTGAAGAGAAGCCTGCTGAGGTTTCATGG
TGGATGGATGCTGTGGAGTCTGCTAAAGCTTATGGGAATGACAATTTCAAGAAACAGGAC
TACAAGGCAGCTCTCAGAAAGTACAGGAAAGCTCTGCGCTACTTGGATCTTTGCTGGGAG
AAAGAAGAGATAGATGAAGATAAGAGCACAGCACTGCGGAAGACCAAGTCAATAATACTC
ACTAATAGCTCCGCATGCAAATTAAAGTTAGGAGATTCAAGTGGGGCTTTATTAGACGCA
GATTTTGCACTGCGTGAAAGGGAGGGAAATGCTAAAGCTTTTTTCCGACAAGGACAGGTT
GGCAACTTTTGTCATATAATTTGTTTTGCTGTTGACTACATGCTGCCGGTGACATTCTAG
CTTAAGTTCAAAACACTTGCGTTTTATGATTGTTCTCTGCAGACCCTGGATCATTCTCTT
GCATAAAATACTGTTTCATGTTTGACTTTTAGCGTGTCTCATTTAAAGTGTGCAATATTA
CTTATTTACTTTCCTTTGCTACTGAACACTTGCTGAAATGGTTTCTCTGTACACAAGGTG
GCTTTACACATATTTTTAGCTACAGGGATTGAGCGAACTGATCAACCCATCAATTCACTG
GCTGTGCCAGCAAATCATCAGTCCAACCTTCATATTTATTAAGTAATGACATTAACATAA
AAGAAAAACCTGGTATCTATATATCTGTATATAAAACTTAAGTTTATAATTGTTTTCCTA
CAGTGCAGGTCTGCTGTAGTGGTGAGAGCTGGCTCACTGAATCATTAGGTCTTGGGTTTT
GATGTAGCCTCTCCGCATTTGTGGGGGAGGCTTACCTTGGTTTATCCCTTCCGCAGACCC
CAATCATGTGGGAGCCTCCGGCACTGAGTCTGCTTCCCTTTTTTATAATTGTTATCCTGT
CATACAAGACAAAAGACTTATCATGCTTACAAGTTTTTGACTTATGTGGACAGAATAAAT
AGACACTCCTGTACACAAAGTTTTTCCCAGTTTATTTGGAAACTGACCCATTTCATGTTT
TTTTGGCTCCAATCAAGTGTCCTCAGTTGTCAGTTATCCACTAACATGGATGTGAGCCTC
CCTTAACAACAGGCTGGTAGTTAACTATGATACCAAAGGATCTAGAAAACTTGCAGCTAA
TGGTGTTATCTCAGCCATGAAATGCTAACGCCAAGGTTGTTGTGTAGTAGCTTTTCTATC
ATACCTACTTTAGTTTTGCTGCTCAGCTGTTGGTCTGATCCTGTGTTTGAAACTATGATT
GACATGACTGAGGATTATATTGGTGAAATAAAATTCTGAACATGGAGTCTACTGTCATCC
CCACAGCCAAAAAAAAACCGGTGCCGCTTTAATAGCACTTTGAACTTTTGCATCCAATAA
ACTGTTTACATTAGGCCCTTCTTTTGCTGTTCTGGCTGTCTTGAGAAAATGCTCCCTTAG
GACAAGCTTAGGAAACCGGTTCCCACTAGATATCAGTGGTGATATCTCAAACTCTTAATA
TGTGGTTGAACTGAAAATATATTTCTTACCAAAGCACTTAATGCTAATAATATCTTGTTG
TTTACCGTTGCCATCTGTAAATTCCTGATCCTTTAAGTTCAATTTTCAGGCACACATTGC
ACTTAATGACATTGATGCAGCCGTGGAGAGCTTTAAACAGGCATTGGAGTTGGAGCCAAA
TGATGCTGGAATCAAAAGAGAGCTGGCTGCTGCAAAGAAGAAGATTGCTGACAGAAGAGA
TCAGGAGCGGAAGGCATTTGCTAGGATTTTCCAATCTTCTGGAAAGTCTGACAAGAGCAA
CGAAGAGAATAATTGATCTACAGTTCCTTTCCCCCGTCTGAAACTTTGCTTAGCTTAAAT
CTGGGGCACATTGGAACAGGAGTCTCATGGGAGTCTGCTCTGCAAAAAAACGCAGATTAC
TGATCTTTAGATAGAAGGAAACATAGTGGGGGGAAAGGAAGCTTTTGTTTTCTTGTACTA
CAGAAGTAGCAATTCGTGCTTTTGTCCCGGTCTTAGTTTATTCAGGAAACGGACATTGAA
TTTAAATGTGCAATTTTTAGAC