Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037089_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:111806506:111808586:-1 gene:Zm00001d037089 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

ATGCCAGTATCCTTCTTCGATCGTATCCTGTTGCTCGACATGGGCACCGGAGGTGTAGGG
CTGGTAGCCGCCGCCCTCACCGTGGTGGTGGTTACGATGCTGTGGACGGTGCTGGTGCGC
CTGGTGTGGCGACCGTACGCCGTCGCGAGGGCGTTCGCGCGGCAGGGCATCCACGGGCCG
CCGTACCGGGTCTTCGTGGGCAGTAGCAAGGAGGTTCAGGCGATGCGGGCGGCGACGAGC
GGCGACACAATGGACCGGACCTCCCACGACTTCATCCCGCGCGTGATGCCGCAGTACCAC
GCGTGGATGACACTCTACGGCAAGGTGTTCCTGATGTGGTCCGGCTCGACTCCGACGCTG
GCCGTGGGCAGCTACGACATGGTAAAGCGGGTCCTCTTCGACAAGTCCGGGCTGTACAGC
AAGACGGACCCGGGACCCACTATCCTGTCCTTGATGGGGATGGGTCTCACCTTCACCAAC
GGCGAGGACTGGTCGCGTCACCGCCGCGTCGTGCACCCGGCGTTCACCATGGACAAGCTC
AAGTCGATGACGGGGGCGATGGTGGCGTGCGCCGCGGAGCTGATCCGGGCGTGGGAAGCG
CGCGCCGCGGCTAGAGGGGAGAAGGTGACGACGGTGGAGGTGGGGCAGCAGTTCAAGGAG
CTCACCGCCGACGTGATCTCGCAGACGGCGTTCGGCAGCAGCTACAGACAGGGGAAGGAG
GTGTTCGTGGCGCAGTGGGAGCTCCAGTACATCGCCTTCAGCGTCTTCAACAACGTGCGC
GTGCCGGGCATGCAGTACGTGCCCACCAAGGCCAACATGCGCCGGTGGCAGCTAGAGCGC
ACGGTGCGGGGCACGCTCATGGCCATCATCGACGAGCGCCTTGCCGCTGCAAAGGAGGGG
TGGGGTTACGGCAGCGACCTGCTCGGCCTCATGCTGGAGGCCAACAACGCCGGCGATGAC
GGCAAGGGGCAGCAGACCATGAGCATGGACGAGATCATCGACGAGTGCAAGACCTTCTTC
TTCGCCGGCCATGACACGACCTCACATCTCCTCACCTGGGCCATGTTCCTCCTCGGCACG
CACCTCGAGTGGCAGCAGCGGCTCAGGGAGGAGGTCATCCAGGAGTGCGGCAGCGCCGAG
GTGCCGCTCGACGGCGACGCCCTCAACAAGCTCAAGCTCGTAACGATGGTGCTGTACGAG
ACGCTCCGGCTGTACGGCGCGGCAACGATGGTCGGGAGGCAGGCGACGGCGGACACGGAC
CTCTGCGGCGTGAAGGTGCCCAAGGGCACCATCATCTTCATCCCGGTCGCGATGCTCCAC
CGCGACGAGGAGGTGTGGGGTGAGGACGTCGGCGTGTTCAACCCGCTCCGGTTCCGGGAC
GGCATAGGCAGGGCGGCGGCGCACCCGAACGCGCTGCTGTGCTTCTCCTTGGGCCCGCGG
TCGTGCATCGGGCAGAACTTCGCGATGCTCGAGGCGAAGGCCACGATGGCGCTGATCCTG
CGGCGGTTCGAGTTCGAGGTGGCGCCGGAGTACGTTCACGCGCCGGTTGACATCCTGACG
CTGCAGCCGTCCAAAGGGCTCCCGGTCGTGCTCAAGCTCTTGGATGCCAGTACAAAAGAT
TGGAAGCCATCACAAGCTCCGTCCAAATGTCCTACAATGCTCATGTGA

Peptide Sequence

PEP ID

Zm00001d037089_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:111806506:111808586:-1 gene:Zm00001d037089 transcript:Zm00001d037089_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

MPVSFFDRILLLDMGTGGVGLVAAALTVVVVTMLWTVLVRLVWRPYAVARAFARQGIHGP
PYRVFVGSSKEVQAMRAATSGDTMDRTSHDFIPRVMPQYHAWMTLYGKVFLMWSGSTPTL
AVGSYDMVKRVLFDKSGLYSKTDPGPTILSLMGMGLTFTNGEDWSRHRRVVHPAFTMDKL
KSMTGAMVACAAELIRAWEARAAARGEKVTTVEVGQQFKELTADVISQTAFGSSYRQGKE
VFVAQWELQYIAFSVFNNVRVPGMQYVPTKANMRRWQLERTVRGTLMAIIDERLAAAKEG
WGYGSDLLGLMLEANNAGDDGKGQQTMSMDEIIDECKTFFFAGHDTTSHLLTWAMFLLGT
HLEWQQRLREEVIQECGSAEVPLDGDALNKLKLVTMVLYETLRLYGAATMVGRQATADTD
LCGVKVPKGTIIFIPVAMLHRDEEVWGEDVGVFNPLRFRDGIGRAAAHPNALLCFSLGPR
SCIGQNFAMLEAKATMALILRRFEFEVAPEYVHAPVDILTLQPSKGLPVVLKLLDASTKD
WKPSQAPSKCPTMLM

Transcript Sequence

Transcript ID

Zm00001d037089_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:111806506:111808586:-1 gene:Zm00001d037089 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative cytochrome P450 superfamily protein

Sequence

GACCACCACGACATCACATGCCAGTATCCTTCTTCGATCGTATCCTGTTGCTCGACATGG
GCACCGGAGGTGTAGGGCTGGTAGCCGCCGCCCTCACCGTGGTGGTGGTTACGATGCTGT
GGACGGTGCTGGTGCGCCTGGTGTGGCGACCGTACGCCGTCGCGAGGGCGTTCGCGCGGC
AGGGCATCCACGGGCCGCCGTACCGGGTCTTCGTGGGCAGTAGCAAGGAGGTTCAGGCGA
TGCGGGCGGCGACGAGCGGCGACACAATGGACCGGACCTCCCACGACTTCATCCCGCGCG
TGATGCCGCAGTACCACGCGTGGATGACACTCTACGGCAAGGTGTTCCTGATGTGGTCCG
GCTCGACTCCGACGCTGGCCGTGGGCAGCTACGACATGGTAAAGCGGGTCCTCTTCGACA
AGTCCGGGCTGTACAGCAAGACGGACCCGGGACCCACTATCCTGTCCTTGATGGGGATGG
GTCTCACCTTCACCAACGGCGAGGACTGGTCGCGTCACCGCCGCGTCGTGCACCCGGCGT
TCACCATGGACAAGCTCAAGTCGATGACGGGGGCGATGGTGGCGTGCGCCGCGGAGCTGA
TCCGGGCGTGGGAAGCGCGCGCCGCGGCTAGAGGGGAGAAGGTGACGACGGTGGAGGTGG
GGCAGCAGTTCAAGGAGCTCACCGCCGACGTGATCTCGCAGACGGCGTTCGGCAGCAGCT
ACAGACAGGGGAAGGAGGTGTTCGTGGCGCAGTGGGAGCTCCAGTACATCGCCTTCAGCG
TCTTCAACAACGTGCGCGTGCCGGGCATGCAGTACGTGCCCACCAAGGCCAACATGCGCC
GGTGGCAGCTAGAGCGCACGGTGCGGGGCACGCTCATGGCCATCATCGACGAGCGCCTTG
CCGCTGCAAAGGAGGGGTGGGGTTACGGCAGCGACCTGCTCGGCCTCATGCTGGAGGCCA
ACAACGCCGGCGATGACGGCAAGGGGCAGCAGACCATGAGCATGGACGAGATCATCGACG
AGTGCAAGACCTTCTTCTTCGCCGGCCATGACACGACCTCACATCTCCTCACCTGGGCCA
TGTTCCTCCTCGGCACGCACCTCGAGTGGCAGCAGCGGCTCAGGGAGGAGGTCATCCAGG
AGTGCGGCAGCGCCGAGGTGCCGCTCGACGGCGACGCCCTCAACAAGCTCAAGCTCGTAA
CGATGGTGCTGTACGAGACGCTCCGGCTGTACGGCGCGGCAACGATGGTCGGGAGGCAGG
CGACGGCGGACACGGACCTCTGCGGCGTGAAGGTGCCCAAGGGCACCATCATCTTCATCC
CGGTCGCGATGCTCCACCGCGACGAGGAGGTGTGGGGTGAGGACGTCGGCGTGTTCAACC
CGCTCCGGTTCCGGGACGGCATAGGCAGGGCGGCGGCGCACCCGAACGCGCTGCTGTGCT
TCTCCTTGGGCCCGCGGTCGTGCATCGGGCAGAACTTCGCGATGCTCGAGGCGAAGGCCA
CGATGGCGCTGATCCTGCGGCGGTTCGAGTTCGAGGTGGCGCCGGAGTACGTTCACGCGC
CGGTTGACATCCTGACGCTGCAGCCGTCCAAAGGGCTCCCGGTCGTGCTCAAGCTCTTGG
ATGCCAGTACAAAAGATTGGAAGCCATCACAAGCTCCGTCCAAATGTCCTACAATGCTCA
TGTGACCTGCCAAGTCATTGATTAGGCTTCTATCCTGCGGTGTGTGTTGTCTCAGACTTG
TTATCGTATTCCATTTTTCTGACCAAGTTATCGTATTTCATAGTGGAACTAAAGATTGTG
ATTTTGGGGATGGAGGCTTCATATATGTGGTGTGGCACTTCGACACAAAGAAAAAAAACG
GGTTGTTGCGTGGTTGCCCCTGTTGCATGATT