Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d037086_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:6:111754943:111762112:1 gene:Zm00001d037086 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 16 description:Origin of replication complex subunit 1A
Sequence	ATGGAAACAATCCTTAGACATTGTTCTATAATGTGCCCCAAAGACTTTAGGGATGCTAAC AACGGAGGGGATGATGTATTTTATTGTGAATATGAGTATGATATACATTGGCATAATTTT AAGCGTTTGGCAGATATTGATGATGAGCCAGAGACAAAGGAAGATCTCAGTGACGAGCCC TACAATGCTGGTGATGATTATAACAGTGACACTGATGAAGATTCAGACTATGACGAGGAG GAAGAATCCACATCATCTTTCTCTGTCAGAAGGAATCAATCACATGAATCTGCGGCGAAT TCAAGGAAAGGTAGAATATATGGCCTGCAAAAAATTGGGATACAAAAAATTCCTGAGCAT GCTCGGTGCCACCAAAAGACTGAGCTGGAGAAGGCTAAAGCAACCCTGTTATTGGCAACT CTTCCTAAGTCATTGCCTTGCAGAGATAAAGAAATGGATGAGATATCAATATTTGTAAAG GATGCAATCTGCAACAACCAATGCCTAGGACGCTGCCTTTATATACATGGTGTACCTGGC ACTGGCAAGACTATGAGTGTACTTGCTGTTATGAGGAGGCTGAGATCTGAATTTGATTCT GGAACTCTGAGGCCATATTGTTTTATCGAAATTAATGGTCTTAAATTAGCATCTCCAGAG AATATCTACAAGGTTGTATATGAACAGTTGAGTGGGCATAGGGTTGGGTGGAAAAAGGCT CTTCACTATTTAACAGAACATTTTTCAGGTGGTACTAAAATTGGAAAGCAAGCAAACCAG CCAATTGTTTTGCTGATCGATGAACTTGATCTTCTTATGACAAGAAACCAATCGGTGTTG TATAACATTCTTGACTGGCCTACCAAACCAAATTCAAATCTAGTTGTTATAGGTATAGCA AACACAATGGATCTTCCAGAAAAGTTATTGCCTCGTATATCAAGTCGGATGGGTATCCAA CGACTGTGTTTTGGTCCATACAATTATAGACAACTGCAGGAAATTATAACAAGCCGTTTA AAGGGTATTGATGCCTTTGAGGAACAGGCTATTGAATTTGCTTCTAGAAAGGTAGCTGCT ATGTCAGGTGATGCTAGGCGAGCTTTAGAGATTTGTAGACGGGCAGCAGAGTTTGCAGAC TACCGTGTCAAACAGTCTCGACAGTCTGCACAGACTACTGTTTCTGCAAAGAAAGGTGAT GCTGTTGTTTCCATGGGTGACATAGAAGCTGCTATTCAGGAAGTCTTCCAGGCACCTCAT ATTCAAGTGATGAAGAATTGCCCAAAGTTTGGAAAAGTTATACTGGTTGCCATGGTTCAT GAGCTGTACAAAAGTGGACTAGGTGAAATAATGTTTGATAAGTTAGCAACAACAGTTTTC TCCTGGTGCCATGCCAACAGAGAACTATTGCCTGGATACGACACTCTCTTGAAAATTTGT TGCAAGCTTGGTGAAAGCAAGATCATCCTCTGTGAAGAGGGTAGTAAGCACAAGTTGCAG AAGGTTCAGCTTAACTATCCAAGTGACGATGTGACATTTGCCCTCAAGGAATCCCCAGAT CTTCCTTGGCTATCCAAGTACTTGTGA

Peptide Sequence

PEP ID	Zm00001d037086_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:6:111754943:111762112:1 gene:Zm00001d037086 transcript:Zm00001d037086_T009 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 16 description:Origin of replication complex subunit 1A
Sequence	METILRHCSIMCPKDFRDANNGGDDVFYCEYEYDIHWHNFKRLADIDDEPETKEDLSDEP YNAGDDYNSDTDEDSDYDEEEESTSSFSVRRNQSHESAANSRKGRIYGLQKIGIQKIPEH ARCHQKTELEKAKATLLLATLPKSLPCRDKEMDEISIFVKDAICNNQCLGRCLYIHGVPG TGKTMSVLAVMRRLRSEFDSGTLRPYCFIEINGLKLASPENIYKVVYEQLSGHRVGWKKA LHYLTEHFSGGTKIGKQANQPIVLLIDELDLLMTRNQSVLYNILDWPTKPNSNLVVIGIA NTMDLPEKLLPRISSRMGIQRLCFGPYNYRQLQEIITSRLKGIDAFEEQAIEFASRKVAA MSGDARRALEICRRAAEFADYRVKQSRQSAQTTVSAKKGDAVVSMGDIEAAIQEVFQAPH IQVMKNCPKFGKVILVAMVHELYKSGLGEIMFDKLATTVFSWCHANRELLPGYDTLLKIC CKLGESKIILCEEGSKHKLQKVQLNYPSDDVTFALKESPDLPWLSKYL

Transcript Sequence

Transcript ID	Zm00001d037086_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:111754943:111762112:1 gene:Zm00001d037086 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHD-transcription factor 16 description:Origin of replication complex subunit 1A
Sequence	AGTTTATGGAGGGAGCCTGATGGGACGTTCTGGGCAAAGGTCAGGTGGTACATTATCCCT GAAGAGACTGCAGCAGGAAGGCAGCTGCATAACTTGAGAAGAGAGCTGTATCGTACCAAT GATCTTGCAGACATTGAGATGGAAACAATCCTTAGACATTGTTCTATAATGTGCCCCAAA GACTTTAGGGATGCTAACAACGGAGGGGATGATGTATTTTATTGTGAATATGAGTATGAT ATACATTGGCATAATTTTAAGCGTTTGGCAGATATTGATGATGAGCCAGAGACAAAGGAA GATCTCAGTGACGAGCCCTACAATGCTGGTGATGATTATAACAGTGACACTGATGAAGAT TCAGACTATGACGAGGAGGAAGAATCCACATCATCTTTCTCTGTCAGAAGGAATCAATCA CATGAATCTGCGGCGAATTCAAGGAAAGGTAGAATATATGGCCTGCAAAAAATTGGGATA CAAAAAATTCCTGAGCATGCTCGGTGCCACCAAAAGACTGAGCTGGAGAAGGCTAAAGCA ACCCTGTTATTGGCAACTCTTCCTAAGTCATTGCCTTGCAGAGATAAAGAAATGGATGAG ATATCAATATTTGTAAAGGATGCAATCTGCAACAACCAATGCCTAGGACGCTGCCTTTAT ATACATGGTGTACCTGGCACTGGCAAGACTATGAGTGTACTTGCTGTTATGAGGAGGCTG AGATCTGAATTTGATTCTGGAACTCTGAGGCCATATTGTTTTATCGAAATTAATGGTCTT AAATTAGCATCTCCAGAGAATATCTACAAGGTTGTATATGAACAGTTGAGTGGGCATAGG GTTGGGTGGAAAAAGGCTCTTCACTATTTAACAGAACATTTTTCAGGTGGTACTAAAATT GGAAAGCAAGCAAACCAGCCAATTGTTTTGCTGATCGATGAACTTGATCTTCTTATGACA AGAAACCAATCGGTGTTGTATAACATTCTTGACTGGCCTACCAAACCAAATTCAAATCTA GTTGTTATAGGTATAGCAAACACAATGGATCTTCCAGAAAAGTTATTGCCTCGTATATCA AGTCGGATGGGTATCCAACGACTGTGTTTTGGTCCATACAATTATAGACAACTGCAGGAA ATTATAACAAGCCGTTTAAAGGGTATTGATGCCTTTGAGGAACAGGCTATTGAATTTGCT TCTAGAAAGGTAGCTGCTATGTCAGGTGATGCTAGGCGAGCTTTAGAGATTTGTAGACGG GCAGCAGAGTTTGCAGACTACCGTGTCAAACAGTCTCGACAGTCTGCACAGACTACTGTT TCTGCAAAGAAAGGTGATGCTGTTGTTTCCATGGGTGACATAGAAGCTGCTATTCAGGAA GTCTTCCAGGCACCTCATATTCAAGTGATGAAGAATTGCCCAAAGTTTGGAAAAGTTATA CTGGTTGCCATGGTTCATGAGCTGTACAAAAGTGGACTAGGTGAAATAATGTTTGATAAG TTAGCAACAACAGTTTTCTCCTGGTGCCATGCCAACAGAGAACTATTGCCTGGATACGAC ACTCTCTTGAAAATTTGTTGCAAGCTTGGTGAAAGCAAGATCATCCTCTGTGAAGAGGGT AGTAAGCACAAGTTGCAGAAGGTTCAGCTTAACTATCCAAGTGACGATGTGACATTTGCC CTCAAGGAATCCCCAGATCTTCCTTGGCTATCCAAGTACTTGTGAGGTTCATATTACATT AACCATTAATTCCTGGCGTTCTGTTGCATTTCTGTTCTCTTTGGAAGCAACGATTCACTT TACCTGCAGACCTTGCATACACACGTCCCATGGTCGATCTGCAAAGGAACCATCGAAGGA TGTCGGCATGGCGCTGCACCCAAGGGATCACGCATATTTAATCGCACAACAGGAACATAA AACGTTAAGAAATATGTACGTCTGCAATTTCGTCTCCTTCAAACTATGGTGTTGTTTGTG TTGTATTGAACTGCCGCGTGTGAGCTGATCCAATTGTTTTCTATTGCCATCTTTCAGTAA CTATATACGAATTGTTCGTTAAACATTGACAGTTTTGAATAAGAAACATTGA