Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d037085_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:6:111709807:111715108:-1 gene:Zm00001d037085 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGCAGCTGCCGAGCTCCGGTAAGCGGCACGCGGAACCGGCCGAGCAGACGATGGCT
CCGGCGCGGCGCGCGGCGGCGGTCAAGCTGGAGGTGGAGGAGCTCGGGGCCAACGAGCGC
GGCCCGCTCAGCAAGCGCGCCAGGCCAGCTCAGCCGATGCCCCCGACGCCTCCGCAGCCG
CAGCAGGATATGTACCACAATGTACTTGATGAACCTAGCCCATTGGGTCTGCGGCTGAAA
AAAAGCCCATCACTCTTGGATTTGATTCAGATGAGACTTTCTCAAGCATCCAACGCTGGG
GAGTCTTCCATGGACAACAGTGGTTCTGAGCCTTCCAAGAAGAAAGACAGTAAATCCGGT
GTGTCTTCAGCAGGCGAACGGCTAAAAGCTTCGAATTTTCCTGCAAATATATTGAAGATT
GGTTCATGGGAGTATGTCTCACGGTATGAAGGTGATTTGGTGGCGAAGTGTTACTTTGCA
AAGCATAAACTTGTGTGGGAAGTTCTGGAAGGTGGCCTTAAAAGTAAGATAGAAATTCAA
TGGTCAGATATTGCTGCTTTGAAGGCAATTTGCCCCGAAAATGGCCAAGGAACCTTGGAC
GTGGTGTTGGCCAGGCCACCTCTTTTCTTTAAAGAGACAGATCCGCAGCCAAGGAAACAC
ACACTGTGGCAGGCTGCCTCAGATTTCACTGGTGGGCAAGCAAGTATGCACAGGCGGCAT
TTTCTGCAGTGCCCTTCAACCTTGTTAAGCAAGAATTTTGAGAAGCTTATTCAGTGTGAT
CAGCGGTTATATCAATTGAGTCAACAGCCAGAGATCACATTAGACCCTACATTGTTTGAA
CCTAGGTGCACAATATTTGAGGATCCGGTTGAATCAAAATGCGCTGGTTTTACTAATTTG
AAAGATGAACATCGGGCTTTGCCTGGCTATTCAGATTCGGTGTCACCATGTGCCGGTTCC
TCCATATCTGCTAAGAAAGAAAACAATGATTCCATAAGAATGCCAGCAGAATATCCTCCT
CAGACAGTAGGAATAGGCATTTTTACAGGAGTTGGTGCTGTAGGTGCACAAGCTGTCAGC
AGAAATGTGAATGGTGCAGCACCAGAATTCAATATCCCCAACTGGTGGAGTCAATTGAAG
GTGCCTGGGCTTAGACCATCCATGTCAGTGGATGATCTGGTCAACCACCTAGGCAACTGC
ATCTCAGAGCAGATCACTTCAGGCGATCCGGCATTGGCCAACAACGAGGTGCCAACCAAA
GAAACACTCGAGGGGATTGCTCAGTACCTTCTTGGTGACACACAAGGCCCGCCGGTTACT
GCTGCAGTCGAGAGATCACTGATGGCCAGGGTGGACTCCCTCTGCTGTTTGATTCAGAAA
GACACAGCACCAGTTGCCAAACCAAAGCCCGAGCCAAATGACGGGGACAGCATCGGCGTG
GAAGCCTCAGATGGTTCCGACGAAGAATTCACCTCCGCGCCAACAGGGAAACCTACAGAT
GCCACCAACCCGCCAGCCATGTCAAGAAAGGATTCGTTTGGAGAGCTGCTGACAAACCTC
CCCCGCATCGCCTCGCTACCACAGTTCCTCTTCAAGATACCAGAGGGTACTGAGAACTGA

Peptide Sequence

PEP ID

Zm00001d037085_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:6:111709807:111715108:-1 gene:Zm00001d037085 transcript:Zm00001d037085_T005 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVQLPSSGKRHAEPAEQTMAPARRAAAVKLEVEELGANERGPLSKRARPAQPMPPTPPQP
QQDMYHNVLDEPSPLGLRLKKSPSLLDLIQMRLSQASNAGESSMDNSGSEPSKKKDSKSG
VSSAGERLKASNFPANILKIGSWEYVSRYEGDLVAKCYFAKHKLVWEVLEGGLKSKIEIQ
WSDIAALKAICPENGQGTLDVVLARPPLFFKETDPQPRKHTLWQAASDFTGGQASMHRRH
FLQCPSTLLSKNFEKLIQCDQRLYQLSQQPEITLDPTLFEPRCTIFEDPVESKCAGFTNL
KDEHRALPGYSDSVSPCAGSSISAKKENNDSIRMPAEYPPQTVGIGIFTGVGAVGAQAVS
RNVNGAAPEFNIPNWWSQLKVPGLRPSMSVDDLVNHLGNCISEQITSGDPALANNEVPTK
ETLEGIAQYLLGDTQGPPVTAAVERSLMARVDSLCCLIQKDTAPVAKPKPEPNDGDSIGV
EASDGSDEEFTSAPTGKPTDATNPPAMSRKDSFGELLTNLPRIASLPQFLFKIPEGTEN

Transcript Sequence

Transcript ID

Zm00001d037085_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:111709807:111715108:-1 gene:Zm00001d037085 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGCCCAAGAAATCCGACCCCACAAGTCATCCACCAGCGCCGCCGGCGGCGGCTATT
TCTGGACCCTTCTCGTCCCCGAAAGCCCATTAGCCCAAGCAGGCTTCTCCGACTCCCGTC
CCCCATTCCGTCCGCCACCGCCTTCCCCCTCCCTCGAATCATTCGATTCGCCTCCCGTCG
TCTCGTCCGCCTGATTCTACTCGGCCGTCACGGTGATCGGAGCCGGCTAGGGTTAGGGTT
CCGTACTTCCGTTGATCTCCACGCCCATGGTGCAGCTGCCGAGCTCCGGTAAGCGGCACG
CGGAACCGGCCGAGCAGACGATGGCTCCGGCGCGGCGCGCGGCGGCGGTCAAGCTGGAGG
TGGAGGAGCTCGGGGCCAACGAGCGCGGCCCGCTCAGCAAGCGCGCCAGGCCAGCTCAGC
CGATGCCCCCGACGCCTCCGCAGCCGCAGCAGGATATGTACCACAATGTACTTGATGAAC
CTAGCCCATTGGGTCTGCGGCTGAAAAAAAGCCCATCACTCTTGGATTTGATTCAGATGA
GACTTTCTCAAGCATCCAACGCTGGGGAGTCTTCCATGGACAACAGTGGTTCTGAGCCTT
CCAAGAAGAAAGACAGTAAATCCGGTGTGTCTTCAGCAGGCGAACGGCTAAAAGCTTCGA
ATTTTCCTGCAAATATATTGAAGATTGGTTCATGGGAGTATGTCTCACGGTATGAAGGTG
ATTTGGTGGCGAAGTGTTACTTTGCAAAGCATAAACTTGTGTGGGAAGTTCTGGAAGGTG
GCCTTAAAAGTAAGATAGAAATTCAATGGTCAGATATTGCTGCTTTGAAGGCAATTTGCC
CCGAAAATGGCCAAGGAACCTTGGACGTGGTGTTGGCCAGGCCACCTCTTTTCTTTAAAG
AGACAGATCCGCAGCCAAGGAAACACACACTGTGGCAGGCTGCCTCAGATTTCACTGGTG
GGCAAGCAAGTATGCACAGGCGGCATTTTCTGCAGTGCCCTTCAACCTTGTTAAGCAAGA
ATTTTGAGAAGCTTATTCAGTGTGATCAGCGGTTATATCAATTGAGTCAACAGCCAGAGA
TCACATTAGACCCTACATTGTTTGAACCTAGGTGCACAATATTTGAGGATCCGGTTGAAT
CAAAATGCGCTGGTTTTACTAATTTGAAAGATGAACATCGGGCTTTGCCTGGCTATTCAG
ATTCGGTGTCACCATGTGCCGGTTCCTCCATATCTGCTAAGAAAGAAAACAATGATTCCA
TAAGAATGCCAGCAGAATATCCTCCTCAGACAGTAGGAATAGGCATTTTTACAGGAGTTG
GTGCTGTAGGTGCACAAGCTGTCAGCAGAAATGTGAATGGTGCAGCACCAGAATTCAATA
TCCCCAACTGGTGGAGTCAATTGAAGGTGCCTGGGCTTAGACCATCCATGTCAGTGGATG
ATCTGGTCAACCACCTAGGCAACTGCATCTCAGAGCAGATCACTTCAGGCGATCCGGCAT
TGGCCAACAACGAGGTGCCAACCAAAGAAACACTCGAGGGGATTGCTCAGTACCTTCTTG
GTGACACACAAGGCCCGCCGGTTACTGCTGCAGTCGAGAGATCACTGATGGCCAGGGTGG
ACTCCCTCTGCTGTTTGATTCAGAAAGACACAGCACCAGTTGCCAAACCAAAGCCCGAGC
CAAATGACGGGGACAGCATCGGCGTGGAAGCCTCAGATGGTTCCGACGAAGAATTCACCT
CCGCGCCAACAGGGAAACCTACAGATGCCACCAACCCGCCAGCCATGTCAAGAAAGGATT
CGTTTGGAGAGCTGCTGACAAACCTCCCCCGCATCGCCTCGCTACCACAGTTCCTCTTCA
AGATACCAGAGGGTACTGAGAACTGAACGTGGAAGTTAAGATCCCTGGAATAGGTAGTTT
GCTGTAAGCCTGTAAAGATTGTATCCAAGCAATAAGAAAGCCCCTTATCACCTCCTCGGA
GGCGTGTTCCCCGCTCTGTAAATTTGACACCGGTAGGTTGCTCCAGTTGTATGTTTTGCG
AATCATGGGTAGTGGAAAATTGAAATGTTCATTGGTTCTTTAAC