Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036984_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:108314918:108317096:-1 gene:Zm00001d036984 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid permease 6
Sequence

ATGCGTGACGGAGGAGGCGCCATGGACGTCGACATGCAAGCCCGCGGTGGCGGTGCTAGC
CATGGCGGCGAACTTGACGACGACGGCAAGGAGAAGAGGACAGGGACGGTGTGGACGGCG
TCGGCGCACATCATCACGGCGGTGATCGGGTCCGGCGTGCTGTCGCTGGCGTGGGCGATG
GCCCAGCTGGGCTGGGTGGCCGGGCCTGTGATCCTGCTGCTCTTCGCGGCCATCACCTAC
TACACCTCCTGCCTCCTCACCGACTGCTACCGCTTCGGCGACCCTGTCACCGGGAAGCGC
AACTACACCTACACTGAGGCCGTCGAGTCCTACCTAGGCGGCAGGTATGTCTGGTTCTGC
GGCTTCTGCCAGTACGCCAACATGTTCGGCACCGGCATCGGCTACACCATCACGGCTTCT
GCCAGCGCTGCGGCTATCCTCAAGTCCAACTGCTTCCACTGGCACGGGCACGACGCCGAC
TGCACCCAGAACACGGGCTCCTACATCGTCGGCTTCGGCGTGGTGCAGGTCATCTTCAGC
CAGCTCTCAAACTTCCACGAGCTCTGGTGGCTCTCCGTGCTCGCGGCCGCCATGTCCTTC
TGCTACTCCACCATCGCCGTCGGGCTCGCCCTCGGCCAGACCATCTCAGGTCCCACGGGC
AAGACGACGCTCTACGGCACGCAGGTCGGGGTGGACGTTGGTAGCGCGGAGGAGAAGATA
TGGCTGACGTTCCAGGCTCTCGGCAACATCGCGTTTGCCTACTCCTACACCATTGTTCTC
ATTGAAATCCAGGACACGCTGCGATCTCCGCCGGCCGAGAACAAGACGATGCGGCAGGCG
TCGGTCCTGGGCGTGGCGACGACCACGGCGTTCTACATGCTGTGCGGCTGCCTGGGCTAC
TCGGCGTTCGGCAACGCGGCGCCGGGTGACATCCTGTCGGGCTTCTACGAGCCCTACTGG
CTGGTGGACTTCGCCAACGTCTGCATCGTGATCCACCTCGTGGGCGGCTTCCAGGTGTTC
CTGCAGCCGCTGTTCGCCGCGGTCGAGGCCGACGTGGCGGCGCGCTGGCCGGCCTGCTCC
GCGCGGGAGCGCCGCGGCGGCGTCGACGTGTTCCGCCTGCTGTGGCGCACCGCGTTCGTC
GCGCTCATCACCCTGTGCGCCGTCCTGCTGCCCTTCTTCAACAGCATCCTGGGAATCCTC
GGCAGCATCGGCTTCTGGCCGCTCACCGTCTTCTTCCCCGTCGAGATGTACATCCGCCAG
CAGCAGATCCCGCGGTTCAGCGCCACGTGGCTGGCGCTGCAGGCCCTCAGCATCTTCTGC
TTCGTCATCACCGTCGCGGCCGGGGCTGCCTCGGTACAGGGCGTGCGCGACTCGCTCAAA
ACCTACGTGCCCTTCCAGACCAGGTCGTGA

Peptide Sequence

PEP ID

Zm00001d036984_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:108314918:108317096:-1 gene:Zm00001d036984 transcript:Zm00001d036984_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid permease 6
Sequence

MRDGGGAMDVDMQARGGGASHGGELDDDGKEKRTGTVWTASAHIITAVIGSGVLSLAWAM
AQLGWVAGPVILLLFAAITYYTSCLLTDCYRFGDPVTGKRNYTYTEAVESYLGGRYVWFC
GFCQYANMFGTGIGYTITASASAAAILKSNCFHWHGHDADCTQNTGSYIVGFGVVQVIFS
QLSNFHELWWLSVLAAAMSFCYSTIAVGLALGQTISGPTGKTTLYGTQVGVDVGSAEEKI
WLTFQALGNIAFAYSYTIVLIEIQDTLRSPPAENKTMRQASVLGVATTTAFYMLCGCLGY
SAFGNAAPGDILSGFYEPYWLVDFANVCIVIHLVGGFQVFLQPLFAAVEADVAARWPACS
ARERRGGVDVFRLLWRTAFVALITLCAVLLPFFNSILGILGSIGFWPLTVFFPVEMYIRQ
QQIPRFSATWLALQALSIFCFVITVAAGAASVQGVRDSLKTYVPFQTRS

Transcript Sequence

Transcript ID

Zm00001d036984_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:108314918:108317096:-1 gene:Zm00001d036984 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid permease 6
Sequence

GGCGCTCGCTCCCTCGCCGGCGTCCCCTCGCCTATATATAGTTTCCCCGCCCCTATTCCG
TCTCCCGACCACTGGCCGGCCGGGCGGCACCGCCATCGGAGTACGTACACACGTCCTGCT
GTCCCGCATGCCACCGGCCGGGGGAGAAAACCAACAGCCAAGCCAAGCCCACATTGTTTC
CGCAGCTAGGTAGAGGGGCAAAGGAGGAGTATAGCGGAGAGGTTGATGCGTGACGGAGGA
GGCGCCATGGACGTCGACATGCAAGCCCGCGGTGGCGGTGCTAGCCATGGCGGCGAACTT
GACGACGACGGCAAGGAGAAGAGGACAGGGACGGTGTGGACGGCGTCGGCGCACATCATC
ACGGCGGTGATCGGGTCCGGCGTGCTGTCGCTGGCGTGGGCGATGGCCCAGCTGGGCTGG
GTGGCCGGGCCTGTGATCCTGCTGCTCTTCGCGGCCATCACCTACTACACCTCCTGCCTC
CTCACCGACTGCTACCGCTTCGGCGACCCTGTCACCGGGAAGCGCAACTACACCTACACT
GAGGCCGTCGAGTCCTACCTAGGCGGCAGGTATGTCTGGTTCTGCGGCTTCTGCCAGTAC
GCCAACATGTTCGGCACCGGCATCGGCTACACCATCACGGCTTCTGCCAGCGCTGCGGCT
ATCCTCAAGTCCAACTGCTTCCACTGGCACGGGCACGACGCCGACTGCACCCAGAACACG
GGCTCCTACATCGTCGGCTTCGGCGTGGTGCAGGTCATCTTCAGCCAGCTCTCAAACTTC
CACGAGCTCTGGTGGCTCTCCGTGCTCGCGGCCGCCATGTCCTTCTGCTACTCCACCATC
GCCGTCGGGCTCGCCCTCGGCCAGACCATCTCAGGTCCCACGGGCAAGACGACGCTCTAC
GGCACGCAGGTCGGGGTGGACGTTGGTAGCGCGGAGGAGAAGATATGGCTGACGTTCCAG
GCTCTCGGCAACATCGCGTTTGCCTACTCCTACACCATTGTTCTCATTGAAATCCAGGAC
ACGCTGCGATCTCCGCCGGCCGAGAACAAGACGATGCGGCAGGCGTCGGTCCTGGGCGTG
GCGACGACCACGGCGTTCTACATGCTGTGCGGCTGCCTGGGCTACTCGGCGTTCGGCAAC
GCGGCGCCGGGTGACATCCTGTCGGGCTTCTACGAGCCCTACTGGCTGGTGGACTTCGCC
AACGTCTGCATCGTGATCCACCTCGTGGGCGGCTTCCAGGTGTTCCTGCAGCCGCTGTTC
GCCGCGGTCGAGGCCGACGTGGCGGCGCGCTGGCCGGCCTGCTCCGCGCGGGAGCGCCGC
GGCGGCGTCGACGTGTTCCGCCTGCTGTGGCGCACCGCGTTCGTCGCGCTCATCACCCTG
TGCGCCGTCCTGCTGCCCTTCTTCAACAGCATCCTGGGAATCCTCGGCAGCATCGGCTTC
TGGCCGCTCACCGTCTTCTTCCCCGTCGAGATGTACATCCGCCAGCAGCAGATCCCGCGG
TTCAGCGCCACGTGGCTGGCGCTGCAGGCCCTCAGCATCTTCTGCTTCGTCATCACCGTC
GCGGCCGGGGCTGCCTCGGTACAGGGCGTGCGCGACTCGCTCAAAACCTACGTGCCCTTC
CAGACCAGGTCGTGATGAGCACTGCACGTACGGTCCCATATGTAGCTCAAAAACTTAATT
ACGTGCTCATCAAGCAGTCAGGCTCCTTCATTCAATTCCAAAGCAGGATTAATTTGGGAT
ACGTGGCTTAATTATATTGGTGTGTTTGCGATGGTATGGTACGATGGGTAGGAGCAGATC
CTCTTAGGCGTGTTTCGCAATCCTCCTCCAACATTATTGTAAATATGTGAATGATTGATT
GTATTCCAATACAGGGAATATGAGTACATATATACAGCG