Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036971_T052
CDS Infomation

cds chromosome:B73_RefGen_v4:6:107852873:107862334:-1 gene:Zm00001d036971 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP/GTP-binding protein family
Sequence

ATGTTTCCCCCCAAAGGGCCCAACCACTACGGGCAGCCGCCGCCTTACGGCGGGCAGCAG
CCGTACAGCCAAATCCCTAGTAGCACTGGATTTGCAGCCCCGACAGCAGCAGGTGGCACT
GATGGTGGTCGGTTTGGTGGGCGTGGAGGACAAGGGGCTGCTGCACAGTATGGAGGGCCT
TATGCATCAGTGTATGGCACCCAACAGGTTGGTGGACTTGGTGGCAAAGGTCCAGCTTCT
TCAAGTCTTCCTAGCTTGCCAAATCGTCCAACTTCTCTCACTGAGTCATCCAAGTTCACA
TCTGCACCTGTGGGGTCTGGCCTGGCAAGACCAAATGATGACTATATGGCTGTGCGAGGT
TATGCACAGAAGCAAGACCAATATGGCACAGATTATCCACTAGAGAGACGTATGTATGGT
GAACACTCGGCCAATCTTGGTAGAAGGGATGGTCTCAGTGATTTGGATAGAAGATACACT
GATCAGATAGCTGCTGGTCATCAGGTTTATGATCATATGGAGCAGAGTTCATCAATGCGC
CATCAGCAGCTCTTGAAAGGTCAGCTGCAGCCTGGATCTGATACGAGACAAGCCGATTAC
TTTGCAGGAAGGTCTGCTCCAGTTCATCAAGCATCCCAGGAAATTGGTGTATATGGAAGA
GTTGATGCTGATAACCACAACATGTCCATTCTTGGGACTACTCCATATGGAAGACAGCAA
GCAGCCTCATTGTTGGAAGGAGCTCCGAGGACAAACATTGACAGCCTCTATGGACAAAGA
TCATCAAGTGCTGGTTTTGGTGCAGGTCTTCCTCCTGGACGTGATTATGCCTCAGGGAAA
GGCCTGCTCCATCCATCTTCGGATCCTGATTACCGAGATAGCATCTTACCCCATGTACAT
CCAGGTGTATCAATGATTGATGACCGTAGAATTGATCGGATCGGTTCTCGTCGTGAATTG
GATCTAAGAGATGAAGAGCGCCGAAGGGACCTAATACTGGAAAGAGAGAAAGAGCTTGAG
TGGGAACGTGAACGTGAGTTACGGGATTTTCGAGACCGTGAAAGAGAAAGAGAACGTGAA
AGGGAAAGGGACCTTGAAAGACTACTAAGAGAACGCGAAAGAGAAAGGGAGCGCGAACAT
GAAAGAGAGCGTGAAAGAGAACGCCTTCGTGAGCGCCGGGAGAAGGAGAGAGAGCGGGAA
AGGAAGCGCGGAGCTGATCCAAGGCGGGAGCACACTCCATCTAGAGGTCCTGGTGACCGG
CGACACTCTTCTCTTAGATCTGAGAAGCCTGTGCGGCGAATCTCCCCTCGACGTGATGCT
GGGCATAGGCATCGTTCACCTGTTAAAGAAATAAAGAGAGAATATATTTGCAAGGTGTTT
CCATTTCGCTTCGTGGATGATGAGAGGGATTATCTGTCCTTGACAAAACGGTATCCCAGA
CTTGCAATTACTCCAGAATTTTCTAAGATTGTCTTGAACTGGGCTAAAGAAAACTTAAAT
CTTCCTCTGGATACACCAGTGAGTTTGGAGCACGATATCCATGATTCAGATGATGGTGCT
GATGAAGGAGCAATTATCTCTACTGAGAAAACATCAAGCTTCAATACTCCGGCCACCATT
TGGAATGCAAAGGTACTATTGATGAGTGGCATGAGCAAAGGTGCCTTTGCTAACATAACT
TCATTGAGAAGTACTGAGGAACGAGTTGTGCACTTGAACAATATCTTAAAATTTGCTGTA
TTCAAGAAGGATCGTTCTCTTTTTGCAATTGGAGGCCCTTGGAATGCAGATATAGATGGT
GGTGACCCATCAGCTGACTGTTCTTGCTTGATTCGAACTGCCATCAGATGCGTTAAGGAA
ACGGTTCACGTTGATCTATCTAGTTGCACCCACTGGAACCGGTTTGTCGAGGTACATTAC
AATAGAATAGGCAAAGATGGACTGTTCAGTCATAAAGAAATTACTGTTCTGTTTGTGCCA
AACTTGTTGGAATGCTTGCCTTCAGTGGATATATGGAAGAATAACTGGATTCTGTACAAA
AAATCAAAGGCAGAAAGGGAGCAGCTCACTGTTAAAAAGGTAAAGAGCCCTGGTGATCCA
AAAGAGCAGATGCAAGTTTCAGGGGAGCTGAACGATGGTAAAAATTTAGATGCTGATCAA
TTAAAAGAGGCTGATGTTGGTTGCAGTGATATGAAAAATGAGAAAGACGATGTTGATATC
AAACAGCAAGGCAATGATGGAGAGGGTACGGGTAAAGTTGAGGAACCTGTTCAGAAGATG
GGTGGGGATGTTGAAGGAAAAAGTACGGGTGACTCCTCTATTGACCATGCAACAACTGGG
GATAAAAAGCCCACAAAAAAGAAAATAATAAAAAAGGTTGTGAAAGTTGTTCGAAAAAAA
ATAACTGGACCTTCAGTTGATAAATCTTCTGAGGACAAGATTGTTGTAGCAGAATCTGCA
AACAAAACTGCAGAAGGGGGGCAAAGTCAACAAAAGAATGATGATGCTGGAAAACAACAG
GAGGGAGCTGGTATAAGTCAACAACCAGAAGCAAAGAAAACT

Peptide Sequence

PEP ID

Zm00001d036971_P052
PEP Infomation

pep chromosome:B73_RefGen_v4:6:107852873:107862334:-1 gene:Zm00001d036971 transcript:Zm00001d036971_T052 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP/GTP-binding protein family
Sequence

MFPPKGPNHYGQPPPYGGQQPYSQIPSSTGFAAPTAAGGTDGGRFGGRGGQGAAAQYGGP
YASVYGTQQVGGLGGKGPASSSLPSLPNRPTSLTESSKFTSAPVGSGLARPNDDYMAVRG
YAQKQDQYGTDYPLERRMYGEHSANLGRRDGLSDLDRRYTDQIAAGHQVYDHMEQSSSMR
HQQLLKGQLQPGSDTRQADYFAGRSAPVHQASQEIGVYGRVDADNHNMSILGTTPYGRQQ
AASLLEGAPRTNIDSLYGQRSSSAGFGAGLPPGRDYASGKGLLHPSSDPDYRDSILPHVH
PGVSMIDDRRIDRIGSRRELDLRDEERRRDLILEREKELEWERERELRDFRDRERERERE
RERDLERLLREREREREREHERERERERLRERREKERERERKRGADPRREHTPSRGPGDR
RHSSLRSEKPVRRISPRRDAGHRHRSPVKEIKREYICKVFPFRFVDDERDYLSLTKRYPR
LAITPEFSKIVLNWAKENLNLPLDTPVSLEHDIHDSDDGADEGAIISTEKTSSFNTPATI
WNAKVLLMSGMSKGAFANITSLRSTEERVVHLNNILKFAVFKKDRSLFAIGGPWNADIDG
GDPSADCSCLIRTAIRCVKETVHVDLSSCTHWNRFVEVHYNRIGKDGLFSHKEITVLFVP
NLLECLPSVDIWKNNWILYKKSKAEREQLTVKKVKSPGDPKEQMQVSGELNDGKNLDADQ
LKEADVGCSDMKNEKDDVDIKQQGNDGEGTGKVEEPVQKMGGDVEGKSTGDSSIDHATTG
DKKPTKKKIIKKVVKVVRKKITGPSVDKSSEDKIVVAESANKTAEGGQSQQKNDDAGKQQ
EGAGISQQPEAKKT

Transcript Sequence

Transcript ID

Zm00001d036971_T052
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:107852873:107862334:-1 gene:Zm00001d036971 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATP/GTP-binding protein family
Sequence

GACACCATCTGGCCTTCTCTTCCATCTCGTGGGTGTTTGTTCGTGCGCGTGGATTGTTTT
GTCCGTGTCTGGTGCCCGTGCAAGAGCCCCTAAGCTGGTGCGTCCGCCATGTTTCCCCCC
AAAGGGCCCAACCACTACGGGCAGCCGCCGCCTTACGGCGGGCAGCAGCCGTACAGCCAA
ATCCCTAGTAGCACTGGATTTGCAGCCCCGACAGCAGCAGGTGGCACTGATGGTGGTCGG
TTTGGTGGGCGTGGAGGACAAGGGGCTGCTGCACAGTATGGAGGGCCTTATGCATCAGTG
TATGGCACCCAACAGGTTGGTGGACTTGGTGGCAAAGGTCCAGCTTCTTCAAGTCTTCCT
AGCTTGCCAAATCGTCCAACTTCTCTCACTGAGTCATCCAAGTTCACATCTGCACCTGTG
GGGTCTGGCCTGGCAAGACCAAATGATGACTATATGGCTGTGCGAGGTTATGCACAGAAG
CAAGACCAATATGGCACAGATTATCCACTAGAGAGACGTATGTATGGTGAACACTCGGCC
AATCTTGGTAGAAGGGATGGTCTCAGTGATTTGGATAGAAGATACACTGATCAGATAGCT
GCTGGTCATCAGGTTTATGATCATATGGAGCAGAGTTCATCAATGCGCCATCAGCAGCTC
TTGAAAGGTCAGCTGCAGCCTGGATCTGATACGAGACAAGCCGATTACTTTGCAGGAAGG
TCTGCTCCAGTTCATCAAGCATCCCAGGAAATTGGTGTATATGGAAGAGTTGATGCTGAT
AACCACAACATGTCCATTCTTGGGACTACTCCATATGGAAGACAGCAAGCAGCCTCATTG
TTGGAAGGAGCTCCGAGGACAAACATTGACAGCCTCTATGGACAAAGATCATCAAGTGCT
GGTTTTGGTGCAGGTCTTCCTCCTGGACGTGATTATGCCTCAGGGAAAGGCCTGCTCCAT
CCATCTTCGGATCCTGATTACCGAGATAGCATCTTACCCCATGTACATCCAGGTGTATCA
ATGATTGATGACCGTAGAATTGATCGGATCGGTTCTCGTCGTGAATTGGATCTAAGAGAT
GAAGAGCGCCGAAGGGACCTAATACTGGAAAGAGAGAAAGAGCTTGAGTGGGAACGTGAA
CGTGAGTTACGGGATTTTCGAGACCGTGAAAGAGAAAGAGAACGTGAAAGGGAAAGGGAC
CTTGAAAGACTACTAAGAGAACGCGAAAGAGAAAGGGAGCGCGAACATGAAAGAGAGCGT
GAAAGAGAACGCCTTCGTGAGCGCCGGGAGAAGGAGAGAGAGCGGGAAAGGAAGCGCGGA
GCTGATCCAAGGCGGGAGCACACTCCATCTAGAGGTCCTGGTGACCGGCGACACTCTTCT
CTTAGATCTGAGAAGCCTGTGCGGCGAATCTCCCCTCGACGTGATGCTGGGCATAGGCAT
CGTTCACCTGTTAAAGAAATAAAGAGAGAATATATTTGCAAGGTGTTTCCATTTCGCTTC
GTGGATGATGAGAGGGATTATCTGTCCTTGACAAAACGGTATCCCAGACTTGCAATTACT
CCAGAATTTTCTAAGATTGTCTTGAACTGGGCTAAAGAAAACTTAAATCTTCCTCTGGAT
ACACCAGTGAGTTTGGAGCACGATATCCATGATTCAGATGATGGTGCTGATGAAGGAGCA
ATTATCTCTACTGAGAAAACATCAAGCTTCAATACTCCGGCCACCATTTGGAATGCAAAG
GTACTATTGATGAGTGGCATGAGCAAAGGTGCCTTTGCTAACATAACTTCATTGAGAAGT
ACTGAGGAACGAGTTGTGCACTTGAACAATATCTTAAAATTTGCTGTATTCAAGAAGGAT
CGTTCTCTTTTTGCAATTGGAGGCCCTTGGAATGCAGATATAGATGGTGGTGACCCATCA
GCTGACTGTTCTTGCTTGATTCGAACTGCCATCAGATGCGTTAAGGAAACGGTTCACGTT
GATCTATCTAGTTGCACCCACTGGAACCGGTTTGTCGAGGTACATTACAATAGAATAGGC
AAAGATGGACTGTTCAGTCATAAAGAAATTACTGTTCTGTTTGTGCCAAACTTGTTGGAA
TGCTTGCCTTCAGTGGATATATGGAAGAATAACTGGATTCTGTACAAAAAATCAAAGGCA
GAAAGGGAGCAGCTCACTGTTAAAAAGGTAAAGAGCCCTGGTGATCCAAAAGAGCAGATG
CAAGTTTCAGGGGAGCTGAACGATGGTAAAAATTTAGATGCTGATCAATTAAAAGAGGCT
GATGTTGGTTGCAGTGATATGAAAAATGAGAAAGACGATGTTGATATCAAACAGCAAGGC
AATGATGGAGAGGGTACGGGTAAAGTTGAGGAACCTGTTCAGAAGATGGGTGGGGATGTT
GAAGGAAAAAGTACGGGTGACTCCTCTATTGACCATGCAACAACTGGGGATAAAAAGCCC
ACAAAAAAGAAAATAATAAAAAAGGTTGTGAAAGTTGTTCGAAAAAAAATAACTGGACCT
TCAGTTGATAAATCTTCTGAGGACAAGATTGTTGTAGCAGAATCTGCAAACAAAACTGCA
GAAGGGGGGCAAAGTCAACAAAAGAATGATGATGCTGGAAAACAACAGGAGGGAGCTGGT
ATAAGTCAACAACCAGAAGCAAAGAAAACTG