Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d036833_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:6:103277557:103280497:-1 gene:Zm00001d036833 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGTCGGACGCCGCCGCGGCCATCCGCCGACTCCTCGTCGCCGGCGTCCGCCCCAGCACC CACCTGCCGCCGCTCACCGTCAAGCTCCTCCACGCCCGCGTCCTCCGCCTGGACATCCTC GCCGACCTATCCCTGCTCCTCCTCCGCGCCACTACCTCCTCCGGCCTGCACCTCCACGCG CTCCGTCTCCACGCCCTCCTCCCCGAGCCCTCCCACCTCACCTTCCCGTTCGCACTCAAG TCCGCCTCGCGCCTCCCCTTCCCGCTCCCCGTCGGCGCGCAGCTCCACGCGCGCTCGCTC AAGCTCCCCTCCCACTCCAACCCGCACGTGCTCACCTCGCTCCTCGGCCTCTACGCGAAA TGCGGCCGCTTGCACGACGCGCAGAGGGCGTTCGACGAAATGCCCCACCCCAGCACCGTC TCCTGGACCGCGCTCATCGCCGCGTACATGGACGCGGGGCACGCTCTCGAAGCCATTGGG GTCGCCAGGAGGGCGTTCGCGAGCGGCATGCGCCCCGACAGCTTCACGGCGGTGCGGGTG CTCACCGCGTGCGCCCGCGTCGCAGATCTGGAGACCGGGGAGGCCGTGTGGGCGGCGGCG CGGCAGGAGGAGGGGGTCGCGGAGAGCGTGTTCGTGGCGACTGCGGCGTTGGACCTGTAC GTCAAGTGCGGGGAGATGGAGAAGGCTAGATCAGTGTTTGACGAGATGAAGAACAGGGAT GCGGTGGCCTGGGGCGCGATGGTCGGAGGGTACGCCTCCAACGGACATCCTCGGGAGGCT CTGGACCTTTTCTTCGCGATGCAGATGGAGGGAGCGAAGCCGGATTGTTACACGGTGGTC GGGGCGCTCTCAGCGTGCACGAGGTTAGGTGCGTTGGATTTGGGACGGCAGGCGGTTGGA ATGGTGCACTGGGATGAGGTCCTTGGCAACCCAGTCCTGGGTACTGCACTGATCGATATG TATGCCAAGTGTGGGAGCACAAGTGAGGCGTGGATGGTGTTCCAGCAGATGTTGGAGAGG GACATCATTGTCTGGAATGCGATGATCCTGGGGCTTGGCATGACTGGCCACGAGAAGATT GCATTTGCGCTTGTTGGTCAGATGAAGAAGTCGGGTGTGAAGCTGAATGATAATACCTTC ATTGGATTGCTCTGCAGCTGCACACATACTGGCCTTGTAAATGATGGGCGGCAGTACTTT CATAACATGACTCATGTATACCGTATAAGCCCTAGGATTGAGCATTATGGTTGTATGGTT GACCTATTCAGTCGTGCGGGATTGCTGGAAGAGGCTCATCAGCTGATTGGTGACATGCCA ATGCTGGCAAATGCCGTTGTATGGGGAGCACTCCTCGGTGGTTGCAAGATCCACCGGAAT GCTGACCTTGCTGAACATGCGTTGAAGCAGCTCATCCGACTGGAGCCATGGAATTCTGGG AACTATGTCATGCTTTCTAACATATACTCGAACAGTGGAAGATGGGAAGATGCTGCAAAG CTTAGGTTGGAAATGAAGGCAAAGGGGATTGAGAAGGTCCCTGCATCTAGCTGGGTTGAG CTTGATGGTAAGGTCCACAAGTTCTATGTTGGGGACGATTCACATCCTCTCTCAGATAAG ATTTATGCAAAGCTTGATGAATTGGGCATGGAAATGAAGGCCATGGGGTATGAACCCACT ACTGAGGTGGTGATGTTTGATGTCGAAAATGAGGAGAAGGAAAACACACTAGTGCATCAC AGCGAGAAGATTGCCATCGCATTCAGTCTCATCACTACTGAACCAGGAGAGACCATTAGG GTCACCAAAAACCTCCGAGTTTGCACTGACTGCCACTCTGCCATCAAGCTCATATCGAGG ATAACCTGTCGTGAAATTGTTGTACGAGATAACAATAGATTCCATTGCTTTAGAGATGGT CATTGTTCTTGCAATGACTACTGGTAG

Peptide Sequence

PEP ID	Zm00001d036833_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:6:103277557:103280497:-1 gene:Zm00001d036833 transcript:Zm00001d036833_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MSDAAAAIRRLLVAGVRPSTHLPPLTVKLLHARVLRLDILADLSLLLLRATTSSGLHLHA LRLHALLPEPSHLTFPFALKSASRLPFPLPVGAQLHARSLKLPSHSNPHVLTSLLGLYAK CGRLHDAQRAFDEMPHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRV LTACARVADLETGEAVWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRD AVAWGAMVGGYASNGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVG MVHWDEVLGNPVLGTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKI AFALVGQMKKSGVKLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMV DLFSRAGLLEEAHQLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSG NYVMLSNIYSNSGRWEDAAKLRLEMKAKGIEKVPASSWVELDGKVHKFYVGDDSHPLSDK IYAKLDELGMEMKAMGYEPTTEVVMFDVENEEKENTLVHHSEKIAIAFSLITTEPGETIR VTKNLRVCTDCHSAIKLISRITCREIVVRDNNRFHCFRDGHCSCNDYW

Transcript Sequence

Transcript ID	Zm00001d036833_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:103277557:103280497:-1 gene:Zm00001d036833 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	GGTGGGTACTGGGGAGGACAAACTGCTGGCGTGAGATATCGTAACCGCCTTCCGACCACC GAACCAGCAATCCACGGGGCTCAGGCTCAGGCTCAGGTTCAGGCTCACTCACGTCCGCTC TTGCCCCGTGCCTTCCACGAACGCGCGCATCCACACCGCGTTTATGTCGGACGCCGCCGC GGCCATCCGCCGACTCCTCGTCGCCGGCGTCCGCCCCAGCACCCACCTGCCGCCGCTCAC CGTCAAGCTCCTCCACGCCCGCGTCCTCCGCCTGGACATCCTCGCCGACCTATCCCTGCT CCTCCTCCGCGCCACTACCTCCTCCGGCCTGCACCTCCACGCGCTCCGTCTCCACGCCCT CCTCCCCGAGCCCTCCCACCTCACCTTCCCGTTCGCACTCAAGTCCGCCTCGCGCCTCCC CTTCCCGCTCCCCGTCGGCGCGCAGCTCCACGCGCGCTCGCTCAAGCTCCCCTCCCACTC CAACCCGCACGTGCTCACCTCGCTCCTCGGCCTCTACGCGAAATGCGGCCGCTTGCACGA CGCGCAGAGGGCGTTCGACGAAATGCCCCACCCCAGCACCGTCTCCTGGACCGCGCTCAT CGCCGCGTACATGGACGCGGGGCACGCTCTCGAAGCCATTGGGGTCGCCAGGAGGGCGTT CGCGAGCGGCATGCGCCCCGACAGCTTCACGGCGGTGCGGGTGCTCACCGCGTGCGCCCG CGTCGCAGATCTGGAGACCGGGGAGGCCGTGTGGGCGGCGGCGCGGCAGGAGGAGGGGGT CGCGGAGAGCGTGTTCGTGGCGACTGCGGCGTTGGACCTGTACGTCAAGTGCGGGGAGAT GGAGAAGGCTAGATCAGTGTTTGACGAGATGAAGAACAGGGATGCGGTGGCCTGGGGCGC GATGGTCGGAGGGTACGCCTCCAACGGACATCCTCGGGAGGCTCTGGACCTTTTCTTCGC GATGCAGATGGAGGGAGCGAAGCCGGATTGTTACACGGTGGTCGGGGCGCTCTCAGCGTG CACGAGGTTAGGTGCGTTGGATTTGGGACGGCAGGCGGTTGGAATGGTGCACTGGGATGA GGTCCTTGGCAACCCAGTCCTGGGTACTGCACTGATCGATATGTATGCCAAGTGTGGGAG CACAAGTGAGGCGTGGATGGTGTTCCAGCAGATGTTGGAGAGGGACATCATTGTCTGGAA TGCGATGATCCTGGGGCTTGGCATGACTGGCCACGAGAAGATTGCATTTGCGCTTGTTGG TCAGATGAAGAAGTCGGGTGTGAAGCTGAATGATAATACCTTCATTGGATTGCTCTGCAG CTGCACACATACTGGCCTTGTAAATGATGGGCGGCAGTACTTTCATAACATGACTCATGT ATACCGTATAAGCCCTAGGATTGAGCATTATGGTTGTATGGTTGACCTATTCAGTCGTGC GGGATTGCTGGAAGAGGCTCATCAGCTGATTGGTGACATGCCAATGCTGGCAAATGCCGT TGTATGGGGAGCACTCCTCGGTGGTTGCAAGATCCACCGGAATGCTGACCTTGCTGAACA TGCGTTGAAGCAGCTCATCCGACTGGAGCCATGGAATTCTGGGAACTATGTCATGCTTTC TAACATATACTCGAACAGTGGAAGATGGGAAGATGCTGCAAAGCTTAGGTTGGAAATGAA GGCAAAGGGGATTGAGAAGGTCCCTGCATCTAGCTGGGTTGAGCTTGATGGTAAGGTCCA CAAGTTCTATGTTGGGGACGATTCACATCCTCTCTCAGATAAGATTTATGCAAAGCTTGA TGAATTGGGCATGGAAATGAAGGCCATGGGGTATGAACCCACTACTGAGGTGGTGATGTT TGATGTCGAAAATGAGGAGAAGGAAAACACACTAGTGCATCACAGCGAGAAGATTGCCAT CGCATTCAGTCTCATCACTACTGAACCAGGAGAGACCATTAGGGTCACCAAAAACCTCCG AGTTTGCACTGACTGCCACTCTGCCATCAAGCTCATATCGAGGATAACCTGTCGTGAAAT TGTTGTACGAGATAACAATAGATTCCATTGCTTTAGAGATGGTCATTGTTCTTGCAATGA CTACTGGTAGTAGACCTACATGTTGCAGTTGCGAGCGGCATGGAGAGCTGGAAGCATGTC CAGTCCATTTTTGTTTGATGTAAAACTTTTATCACCTAGAATTTTGACCGGGCATAGAAG AGGCAGAGTATTAGGCGTTTGGATGTCAGTTCCTTTCCCAGTGTATAATTTCTGCTAGAG CCCTCCGGCATTCTGAAAGATCTGGATACAGTGATACACGGCAGCGGTGGTATAGATATA TGCAAGTTCTGAGAAGACAATTGTTCTGCTGACATACACATTCTTGCTTCCTTGGCAGCC AGTAAAAAACACCGGCGTGTTCGGCTGGCTACAAGCCGACACTGTTGCAGCTGTTTGGAT TGCTGCAGCTGCAATCCATAGAGAGAAAAATACTGTAGAAGCCGCAGCCGCAGCCGGATT GCAGCCGCAGCAAGCCGCAGCGAACAAGCTGCACATCTGAAACTCTTTGTCATGTTGCGG CATCTGGCTCTGGACTGGAAACAGTTTGACTTGTTTTTTTTTTGTAATAACGTTTATCTG TGAATTCTAGCTCAAAGTTCTGAGGCTGCAATCCAATTTTGCCGCATTCT