Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036830_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:6:103104797:103107600:-1 gene:Zm00001d036830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent lipid-binding (CaLB domain) family protein

Sequence

ATGGCGAGGAAGCTGAGAGAGTTGCTGCAGAAGAGCGGCAACCGCGTATGTGCCGACTGC
GGCGCACCTGATCCCAAATGGGCATCGGCTAACATTGGAGTATTCATTTGCCTAAAGTGT
TCTGGTGTTCACAGAAGCCTCGGGACACATGTTTCAAAGGTGCTGTCAGTCACACTAGAT
CAATGGACGGATGATGAGATCAACTCCATGATAGAAGTTGGTGGAAACTCTTATGCCAAT
GCTATATATGAAGCATTTCTGCCAGAGGGCTATCAGAAGCCGCATCCAGATTCTAGCCAA
GAAGAGAGAGCTGATTTCATCAGGTCGAAGTATGAGTTGCAAGAATTCCTGAAGCCAAGC
CTAAGGTTAGTTTCCAGCAATAAGGGCTCTTTAGAGGCGACCAGCTCTCGAAAGCATATG
GATAATTCTGTGTCTCTTTCTGCTAGTTTCAGCAGTGAGGCTGGAATGGTTGAGTTCATT
GGAATACTAAAAGTTAAAGTGATAAGAGGGACTAAACTAGCTGTAAGAGACCTGATGAGT
AGTGACCCCTATGTTGTACTGACCCTAGGACAGCAGAAAGCAAAAACTTCTGTGAGTAAA
CGTAATCTGAATCCTGTTTGGAATGAAGAGCTTAAGCTGTCAGTTCCCCAGCACTACGGG
CCTCTGAAACTTCAAGTGTTCGACCACGACATGCTATCGAAGGATGACGAGATGGGTGAC
GCAGAGATTGACCTGCAGCCGATGATCAGTGCAGCTACAGCGTTTGGCGACCCTGATCTG
CTCGCGGACATGCAGATCGGCAAGTGGCTCAGGTCCCCAGATAATGCGCTGGCAAGGGAC
AGCGCCGTCAATGTCGTTGGTGGCAAGGTCAAGCAGGAGGTCTCTCTGAGGCTGCAGAAC
GTGGAATCGGGGGAGGTGGAACTGGAGCTGGAGTGGATACCACTCAATCAGTAG

Peptide Sequence

PEP ID

Zm00001d036830_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:6:103104797:103107600:-1 gene:Zm00001d036830 transcript:Zm00001d036830_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent lipid-binding (CaLB domain) family protein

Sequence

MARKLRELLQKSGNRVCADCGAPDPKWASANIGVFICLKCSGVHRSLGTHVSKVLSVTLD
QWTDDEINSMIEVGGNSYANAIYEAFLPEGYQKPHPDSSQEERADFIRSKYELQEFLKPS
LRLVSSNKGSLEATSSRKHMDNSVSLSASFSSEAGMVEFIGILKVKVIRGTKLAVRDLMS
SDPYVVLTLGQQKAKTSVSKRNLNPVWNEELKLSVPQHYGPLKLQVFDHDMLSKDDEMGD
AEIDLQPMISAATAFGDPDLLADMQIGKWLRSPDNALARDSAVNVVGGKVKQEVSLRLQN
VESGEVELELEWIPLNQ

Transcript Sequence

Transcript ID

Zm00001d036830_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:103104797:103107600:-1 gene:Zm00001d036830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative calcium-dependent lipid-binding (CaLB domain) family protein

Sequence

GCTCATGTTAGAGAACCCCCTGGGAAAACGCAGCGGAGAAACTCTGGAGATCGAAACCCC
GGCACGCAGCTAGGCGAACTGCACGCAACTGCAGGTCGACGTCTGATCCATTTCTTGTCG
CTTCAGCTTCTGGTGCTGGTCTTCTTCCAGTTGCATCCTGGTTACCTGTGTCAAGGGGCG
GTTGGTGTCTGGTGTAGTTGGAGGGCAGAGCTTCGCGGGCGGCGAAGAAGAAGAGCAGCA
GAGAGACTCTGCTGACACTGACCGAGGGAGATATGGCGAGGAAGCTGAGAGAGTTGCTGC
AGAAGAGCGGCAACCGCGTATGTGCCGACTGCGGCGCACCTGATCCCAAATGGGCATCGG
CTAACATTGGAGTATTCATTTGCCTAAAGTGTTCTGGTGTTCACAGAAGCCTCGGGACAC
ATGTTTCAAAGGTGCTGTCAGTCACACTAGATCAATGGACGGATGATGAGATCAACTCCA
TGATAGAAGTTGGTGGAAACTCTTATGCCAATGCTATATATGAAGCATTTCTGCCAGAGG
GCTATCAGAAGCCGCATCCAGATTCTAGCCAAGAAGAGAGAGCTGATTTCATCAGGTCGA
AGTATGAGTTGCAAGAATTCCTGAAGCCAAGCCTAAGGTTAGTTTCCAGCAATAAGGGCT
CTTTAGAGGCGACCAGCTCTCGAAAGCATATGGATAATTCTGTGTCTCTTTCTGCTAGTT
TCAGCAGTGAGGCTGGAATGGTTGAGTTCATTGGAATACTAAAAGTTAAAGTGATAAGAG
GGACTAAACTAGCTGTAAGAGACCTGATGAGTAGTGACCCCTATGTTGTACTGACCCTAG
GACAGCAGAAAGCAAAAACTTCTGTGAGTAAACGTAATCTGAATCCTGTTTGGAATGAAG
AGCTTAAGCTGTCAGTTCCCCAGCACTACGGGCCTCTGAAACTTCAAGTGTTCGACCACG
ACATGCTATCGAAGGATGACGAGATGGGTGACGCAGAGATTGACCTGCAGCCGATGATCA
GTGCAGCTACAGCGTTTGGCGACCCTGATCTGCTCGCGGACATGCAGATCGGCAAGTGGC
TCAGGTCCCCAGATAATGCGCTGGCAAGGGACAGCGCCGTCAATGTCGTTGGTGGCAAGG
TCAAGCAGGAGGTCTCTCTGAGGCTGCAGAACGTGGAATCGGGGGAGGTGGAACTGGAGC
TGGAGTGGATACCACTCAATCAGTAGAGTTTAAATCCACCTGTAGGCTATATGTGATGCA
TGTTTCATGTGTGCGACACAAGTCCTGATGCTCTTGATCATCTTCAGTTTGTCAGGGTGC
CTGCAGTGTTGTAGACTATCTTTGCGGTTGTAGAATCAGTGTCGGAGCCCGGGCACCTTG
ACTGGCTCGGCAACTCGGTACAATGATAGTTTGAGGACTCAATGACTTGTTAGTACAAGT
ATGAGACTGTTGTTTGTATGCGTTTGCTGGTAATGAAATCTTAGGTGGGGGACCCTCCCC
CTCAACTTT