Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d036823_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:102273075:102274307:-1 gene:Zm00001d036823 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polygalacturonase2 description:Pectin lyase-like superfamily protein
Sequence	ATGGCGTGCACAAACAATGCGATGAGAGCCTTGTTCCTCCTGGTCCTCTTCTGCATCGTG CATGGTGAGAAGGAAGAGTCAAAGGGCATCGATGCGAAAGCGTCCGGGCCTGGTGGGTCC TTCGACATCACCAAGTTGGGCGCCTCCGGCAATGGCAAGACAGACAGCACGAAGGCTGTG CAGGAGGCATGGGCATCGGCGTGCGGCGGCACTGGGAAGCAGACAATCCTCATACCCAAG GGCGACTTCCTTGTCGGACAACTCAACTTTACAGGCCCTTGCAAGGGCGACGTGACCATC CAGGTGGATGGCAATCTGCTGGCGACCACGGACCTAAGCCAGTACAAGGACCATGGTAAT TGGATCGAGATTCTACGCGTGGATAACCTGGTCATCACCGGCAAGGGAAACCTTGACGGG CAGGGCCCAGCCGTGTGGAGCAAGAACTCCTGCACCAAGAAGTACGACTGCAAGATCCTT CCCAACTCGCTGGTGATGGACTTCGTGAACAACGGGGAGGTGTCCGGGGTCACGCTGCTC AACTCCAAGTTCTTCCACATGAACATGTACCGGTGCAAGGACATGCTGATCAAGGACGTG ACCGTGACGGCGCCCGGGGACAGCCCCAACACGGATGGCATCCACATGGGCGACTCATCC GGGATCACCATCACCAACACCGTCATTGGCGTCGGCGACGACTGCATCTCCATCGGCCCC GGGACCTCCAAGGTGAACATCACCGGCGTGACCTGTGGCCCTGGCCACGGCATCAGCATC GGCAGCCTAGGGCGGTACAAGGACGAGAAGGACGTCACGGACATCAACGTCAAGGATTGC ACTCTTAAGAAGACGATGTTCGGCGTCCGCATCAAGGCGTACGAGGACGCCGCCTCCGTG CTCACCGTCTCCAAGATCCACTACGAGAATATCAAGATGGAGGACTCAGCCAACCCCATC TTCATCGACATGAAGTACTGCCCCAACAAGTTGTGTACCGCCAACGGCGCCTCCAAGGTC ACCGTCAAGGACGTCACCTTCAAGAACATCACCGGCACCTCCTCCACCCCGGAGGCCGTT AGCCTGCTCTGCACTGCCAAGGTCCCATGCACCGGCGTCACCATGGATGACGTCAACGTC GAGTATAGCGGCACCAACAACAAGACCATGGCTATATGCACGAACGCCAAGGGCAGCACC AAGGGTTGCCTCAAGGAGCTTGCATGCTTCTAG

Peptide Sequence

PEP ID	Zm00001d036823_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:102273075:102274307:-1 gene:Zm00001d036823 transcript:Zm00001d036823_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polygalacturonase2 description:Pectin lyase-like superfamily protein
Sequence	MACTNNAMRALFLLVLFCIVHGEKEESKGIDAKASGPGGSFDITKLGASGNGKTDSTKAV QEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYKDHGN WIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLL NSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGP GTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASV LTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAV SLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF

Transcript Sequence

Transcript ID	Zm00001d036823_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:102273075:102274307:-1 gene:Zm00001d036823 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:polygalacturonase2 description:Pectin lyase-like superfamily protein
Sequence	ATGGCGTGCACAAACAATGCGATGAGAGCCTTGTTCCTCCTGGTCCTCTTCTGCATCGTG CATGGTGAGAAGGAAGAGTCAAAGGGCATCGATGCGAAAGCGTCCGGGCCTGGTGGGTCC TTCGACATCACCAAGTTGGGCGCCTCCGGCAATGGCAAGACAGACAGCACGAAGGCTGTG CAGGAGGCATGGGCATCGGCGTGCGGCGGCACTGGGAAGCAGACAATCCTCATACCCAAG GGCGACTTCCTTGTCGGACAACTCAACTTTACAGGCCCTTGCAAGGGCGACGTGACCATC CAGGTGGATGGCAATCTGCTGGCGACCACGGACCTAAGCCAGTACAAGGACCATGGTAAT TGGATCGAGATTCTACGCGTGGATAACCTGGTCATCACCGGCAAGGGAAACCTTGACGGG CAGGGCCCAGCCGTGTGGAGCAAGAACTCCTGCACCAAGAAGTACGACTGCAAGATCCTT CCCAACTCGCTGGTGATGGACTTCGTGAACAACGGGGAGGTGTCCGGGGTCACGCTGCTC AACTCCAAGTTCTTCCACATGAACATGTACCGGTGCAAGGACATGCTGATCAAGGACGTG ACCGTGACGGCGCCCGGGGACAGCCCCAACACGGATGGCATCCACATGGGCGACTCATCC GGGATCACCATCACCAACACCGTCATTGGCGTCGGCGACGACTGCATCTCCATCGGCCCC GGGACCTCCAAGGTGAACATCACCGGCGTGACCTGTGGCCCTGGCCACGGCATCAGCATC GGCAGCCTAGGGCGGTACAAGGACGAGAAGGACGTCACGGACATCAACGTCAAGGATTGC ACTCTTAAGAAGACGATGTTCGGCGTCCGCATCAAGGCGTACGAGGACGCCGCCTCCGTG CTCACCGTCTCCAAGATCCACTACGAGAATATCAAGATGGAGGACTCAGCCAACCCCATC TTCATCGACATGAAGTACTGCCCCAACAAGTTGTGTACCGCCAACGGCGCCTCCAAGGTC ACCGTCAAGGACGTCACCTTCAAGAACATCACCGGCACCTCCTCCACCCCGGAGGCCGTT AGCCTGCTCTGCACTGCCAAGGTCCCATGCACCGGCGTCACCATGGATGACGTCAACGTC GAGTATAGCGGCACCAACAACAAGACCATGGCTATATGCACGAACGCCAAGGGCAGCACC AAGGGTTGCCTCAAGGAGCTTGCATGCTTCTAG