Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d036818_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:6:101960641:101962552:-1 gene:Zm00001d036818 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ATGCCACTGCGTTTAGCCGCTCTGCTTCTCCTGGCTACTACGGCGACGTGGACCGCAGGG GTCACCGCCGCTGCCGCCGGCCGCGTCTTCAATGTGTCGGACTTCGGCGCGGTCGCGGAC GGGCGCACGGACGACTCCGAGGCCTTCCTGAGGGCGTGGACGGAGGCGTGCGCGACGCCG GGGAGGCCGGCGGTCGTGGTCCCCAGGGGCGACTACCTGCTCCACCCGCTGGTGTTCCGG GGCCCGTGCAGGGGCTACGTGGAGGTCCACGTCGGTGGCGTCCTCCGCGCGCCGCCGGGG CTCGCCGCCTTCCGTGGCTGCCGCGAGTGGGTCCACTTCTCCAGCATCGACGGGCTGCTG GTCACCGGCGGCGGCACGTTCGATGGCCGCGGCGCCACCGCGTGGCCGCTCAATGAGTGC CCGCAGAAGCGCGACTGCAGGCTTCTCCCAACCTCCATCAAGCTCGGGCTGGTGAGGAAC GCGACCATCACGGGCGTGACGTCGCTGGACAGCAAGTTCTTCCACGTGGCCGTGGTGGGC AGCCAGGACGTGCGCATCCACGGCGTCAGCATCCGCGCGCCGCGCAGCAGCCCGAACACG GACGGCGTGCACATCCAGGGCTCGTCGAACGTGCGCGTGACGGACTCGGCCGTGGCCACG GGCGACGATTGCGTGTCCGTGGGGCCGGGCAGCTCGGACGTGCTGGTGTCCGGAGTGGCG TGCGGCCCGGGCCACGGCATCAGCGTGGGCAGCCTGGGCCGGTACCCCGGCGAGGGGGAC GTGCGGCGGCTGCGCGTGGCCAACTGCACCGTCGCCGGCACGTCCAACGGCGTGCGCATC AAGACGTGGCGCGGCGGGTCGTGGCCGCCCACGGCCGTGGCCGGGCTCGTCTTCGAGGAC ATCGTCATGAGGAAGGTCCGCAACCCCATCATCATCGACCAGGAGTACTGCCCCTACCCG TCCTGCCGCGAGTCGGAGCAGCGGCCGTCGGCGGTGAGGATAAGCGACGTCAAGTTCAGG AACATCCGGGGCGAGTCGGCGACCAAGGTGGCCGTGAAGCTGTCGTGCAGCGAGGCCAGC CCGTGCCGGGAGCTGGAGCTTAGGGACATCGACCTGCGCTACGTCAAGCGCGGGGTCGCC ACGCAGTCGCGCTGCGCGCACGTCGCCGGCGGTGTGGTCGGCGGCACGCTGGTCCCTCCC TCTTGCATATGA

Peptide Sequence

PEP ID	Zm00001d036818_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:6:101960641:101962552:-1 gene:Zm00001d036818 transcript:Zm00001d036818_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	MPLRLAALLLLATTATWTAGVTAAAAGRVFNVSDFGAVADGRTDDSEAFLRAWTEACATP GRPAVVVPRGDYLLHPLVFRGPCRGYVEVHVGGVLRAPPGLAAFRGCREWVHFSSIDGLL VTGGGTFDGRGATAWPLNECPQKRDCRLLPTSIKLGLVRNATITGVTSLDSKFFHVAVVG SQDVRIHGVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVATGDDCVSVGPGSSDVLVSGVA CGPGHGISVGSLGRYPGEGDVRRLRVANCTVAGTSNGVRIKTWRGGSWPPTAVAGLVFED IVMRKVRNPIIIDQEYCPYPSCRESEQRPSAVRISDVKFRNIRGESATKVAVKLSCSEAS PCRELELRDIDLRYVKRGVATQSRCAHVAGGVVGGTLVPPSCI

Transcript Sequence

Transcript ID	Zm00001d036818_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:101960641:101962552:-1 gene:Zm00001d036818 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	GTAAAACCATGCATGCTCGGAGCAATCCGTGATGCCAACTGCATGTTAGGCATGTAGCTT AATTTTATTCGATCTGTTCTCTTCCAGATCGAGCTGAGGTAAGGTACCGACGCAGCCATG CCACTGCGTTTAGCCGCTCTGCTTCTCCTGGCTACTACGGCGACGTGGACCGCAGGGGTC ACCGCCGCTGCCGCCGGCCGCGTCTTCAATGTGTCGGACTTCGGCGCGGTCGCGGACGGG CGCACGGACGACTCCGAGGCCTTCCTGAGGGCGTGGACGGAGGCGTGCGCGACGCCGGGG AGGCCGGCGGTCGTGGTCCCCAGGGGCGACTACCTGCTCCACCCGCTGGTGTTCCGGGGC CCGTGCAGGGGCTACGTGGAGGTCCACGTCGGTGGCGTCCTCCGCGCGCCGCCGGGGCTC GCCGCCTTCCGTGGCTGCCGCGAGTGGGTCCACTTCTCCAGCATCGACGGGCTGCTGGTC ACCGGCGGCGGCACGTTCGATGGCCGCGGCGCCACCGCGTGGCCGCTCAATGAGTGCCCG CAGAAGCGCGACTGCAGGCTTCTCCCAACCTCCATCAAGCTCGGGCTGGTGAGGAACGCG ACCATCACGGGCGTGACGTCGCTGGACAGCAAGTTCTTCCACGTGGCCGTGGTGGGCAGC CAGGACGTGCGCATCCACGGCGTCAGCATCCGCGCGCCGCGCAGCAGCCCGAACACGGAC GGCGTGCACATCCAGGGCTCGTCGAACGTGCGCGTGACGGACTCGGCCGTGGCCACGGGC GACGATTGCGTGTCCGTGGGGCCGGGCAGCTCGGACGTGCTGGTGTCCGGAGTGGCGTGC GGCCCGGGCCACGGCATCAGCGTGGGCAGCCTGGGCCGGTACCCCGGCGAGGGGGACGTG CGGCGGCTGCGCGTGGCCAACTGCACCGTCGCCGGCACGTCCAACGGCGTGCGCATCAAG ACGTGGCGCGGCGGGTCGTGGCCGCCCACGGCCGTGGCCGGGCTCGTCTTCGAGGACATC GTCATGAGGAAGGTCCGCAACCCCATCATCATCGACCAGGAGTACTGCCCCTACCCGTCC TGCCGCGAGTCGGAGCAGCGGCCGTCGGCGGTGAGGATAAGCGACGTCAAGTTCAGGAAC ATCCGGGGCGAGTCGGCGACCAAGGTGGCCGTGAAGCTGTCGTGCAGCGAGGCCAGCCCG TGCCGGGAGCTGGAGCTTAGGGACATCGACCTGCGCTACGTCAAGCGCGGGGTCGCCACG CAGTCGCGCTGCGCGCACGTCGCCGGCGGTGTGGTCGGCGGCACGCTGGTCCCTCCCTCT TGCATATGAACGCCGGCCGCTCGCTCGCGCTACGTCAAGAGATGGCTTGCTGCTGACTAG CTATGTGGACTGAAATACGGGTTAGCTAGTGAAAGAACGATGTACGGGCACAACAGTGCC GTATTGTAGGTTGTAGTCGAGTTTTTTTTTTCTTGAATTTTGTGGCTAGTAGTGGTTCTC ACCTCCGCTCCAACGCGACCTGGATTTGCTGACGACTCAGCTGTTGACTGCATCTGGATC TCGTCACCCTCCAGGATGATAGGATATATGCATGTGCTCAATGTAGAAATGGAGCTCAAA TCCTGAAATTTGCGAAGCAGTAGAACTTCTTCAGTC