Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d036759_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:6:99946793:99956677:1 gene:Zm00001d036759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox (PX) domain-containing protein
Sequence	ATGCTTGATGGACAAAATTTGCTAACGCCATGCATATGTGGCAGAATTTCCATGAAAAGC TGTCCATGCTCTAGCAGGTTTCCATTAGTTAAGAAACATTCTATCTACTCACTATATTAT TTGTTTCAACACACCTCTGAAACTATCTTTTGGTCAACGCATCTCATGGGCTCATTGCCT ATTGACTGCATACAGGAGGGAAGGAACACCATATGGCCACATAATCCTCAAACAGGTTGG AGTTACTGTGTGATGATACCTTCTTGGATCACTCAAACACCTGAAACTGGTGTGACCGCT GATAGCTTTTTGAAATCTGTCGTTTTTTACAGGATACATGTCGGTATACAATCTCCAGAA GGCTTTAGCTCTAGCCATGGAATTCTCAGAAGGTTTAGTGACTTTCTGAATCTATCTTCT GATCTTAAGAGCGCATTTCCCAGAAAAGATGCCCCGTCGGCTCCTCCGAAGCATGCTTTC TTAAGAATAAATTCAAGCAGGTTGCTTCTAGAAGAGAGAAGGCATGCATTGGAGGAGTGG ATGCAAAAGTTACTTTCTGACATTGACTTGTCAAGAAGTGCTCCTGTTGCTGCTTTTTTT GAGCTTGAAGCTGCTGCACGTTCATATTTCCAAGAACGGAATGGGCGTCCTTCTGAAGTA GGTTCTTCTACAAAAAGCAGTACTGCCTCTTCTCCACATCCTGATGGACCTGCTTCTGGT TCTCTTGCTGAGTCCAATCAAATAAATCAAACTCTTACTCGTGGCAGCAGTCTGACAGGA GCAACTGGTAATGGTGTGCTTGGAGAAGCTATCTTAGATCAGTCCGATGAGCTTGTTAGT AATGCCTTGAATCACAGGAAAGGGAACCTTGTATTGGAACATGATGGTAGGAATGGTTCA GCAGCGTCTTATAGGGGAGTTGTTTCAGATGAGGACCGTGTATCTAATCCCGGCCATGCT AGGAAGGACTCTGCTGAAAGTATTGGGAGTGATTTGAGTTCTTTAAGAGGAATTGAATTA TCTATTCCAGGGGTTAGTAGTTCCCTTTGGGATGGTGCTGTGGTGGATGGACATATTAGT CAAACAGAACATCTTACTGGTTTAGATATGCATCTTTTGTATGATATGGATGCACAAGTC ATCCTTCCAAATGATCAAAAACAGAAGTTGACTAGACTTTTGATCACAATGCAACAAAGA ATAGGGGCAGCAAAAACTGATATGGAGGATCTCATAGCACGACTAAATCAGGAAGCAGCT GTTAAAGAATATCTTACTACAAAGGTTAAGGATTTGGAGGTTGAATTGGAAGCCGCAAAG CAAAAGGGTAGAGAGACACTGCAACAAGCTATCCTGACTGAAAGAGAGAGGATTACCCAG ATGCAGTGGGATATGGATGAGCTCCGTAGGAAGTATTCTGAGATGGAGTCAAACCTGAAG GCTGAACAAAATGAGAAAACTCGTGCAGAGTCAGAGAAAACAACCGCTAGTGATAAAAAT GAAACATTACTTGAAGAATTAGAAATCAAACGAAAAGAAGTCGAGACTTTGAAACATCAT CTTGTAGAAGCTGAGGCAAAGTCTAAAGCAGATAAGAAAGTTCTTGTAAAAGAGGTCAAG TCTCTTAGAAACTCCCAAACAGAGATGAAGAAAGTGTTGAATCAGTATCTTGAACAGAAG ACTGGTTTAGAGAGAGTTATTATTAGAGATAAACAGAGGTCAGCACGTGCAAAGTTATGC CGAGTGAAATTTCTTCATGAGTGTCGACTGCTGCATGAGCGTCTACTGGAATGTAGTGCT AAATTTCTAGCAGAAGAACAAGGCAATTTTACTATTGATCCTTCGTCCTTGCCTGATGCA TTAGATCTTCTAGCAACATCAGACAATAGAGTACGCTTACTCATTGCTGAGGCTCAACTT TTAGCACGAGATGATGAACAAGGCTCTTCTGATGATGGCGACAATTCTGATAGCATATCG TCATTAACTATGAGCTGGGAAGATGCAAAAGTTACAGATGAAGATGCAACGAAAATACTT TCTGATCTACTTATTGACAACGCGCAGCTGAGGCTGCGTCTTAATGCTGTCATCCGCAAC GCTGTAAATACTGCCGTGAAGCCAGAGAAAGAAGGTAGTGGCGAGGTTCTTCCCAAAAAG ACAGTCCTTAACTGGTTGTTAGACAGATGA

Peptide Sequence

PEP ID	Zm00001d036759_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:6:99946793:99956677:1 gene:Zm00001d036759 transcript:Zm00001d036759_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox (PX) domain-containing protein
Sequence	MLDGQNLLTPCICGRISMKSCPCSSRFPLVKKHSIYSLYYLFQHTSETIFWSTHLMGSLP IDCIQEGRNTIWPHNPQTGWSYCVMIPSWITQTPETGVTADSFLKSVVFYRIHVGIQSPE GFSSSHGILRRFSDFLNLSSDLKSAFPRKDAPSAPPKHAFLRINSSRLLLEERRHALEEW MQKLLSDIDLSRSAPVAAFFELEAAARSYFQERNGRPSEVGSSTKSSTASSPHPDGPASG SLAESNQINQTLTRGSSLTGATGNGVLGEAILDQSDELVSNALNHRKGNLVLEHDGRNGS AASYRGVVSDEDRVSNPGHARKDSAESIGSDLSSLRGIELSIPGVSSSLWDGAVVDGHIS QTEHLTGLDMHLLYDMDAQVILPNDQKQKLTRLLITMQQRIGAAKTDMEDLIARLNQEAA VKEYLTTKVKDLEVELEAAKQKGRETLQQAILTERERITQMQWDMDELRRKYSEMESNLK AEQNEKTRAESEKTTASDKNETLLEELEIKRKEVETLKHHLVEAEAKSKADKKVLVKEVK SLRNSQTEMKKVLNQYLEQKTGLERVIIRDKQRSARAKLCRVKFLHECRLLHERLLECSA KFLAEEQGNFTIDPSSLPDALDLLATSDNRVRLLIAEAQLLARDDEQGSSDDGDNSDSIS SLTMSWEDAKVTDEDATKILSDLLIDNAQLRLRLNAVIRNAVNTAVKPEKEGSGEVLPKK TVLNWLLDR

Transcript Sequence

Transcript ID	Zm00001d036759_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:99946793:99956677:1 gene:Zm00001d036759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phox (PX) domain-containing protein
Sequence	AGCCCAGTAGTGGCAGACTAGAATCGTGGGCGCGACGCCTCGGCTGATTCGTCCGCCCCG ATCCCACCACCACCGTACTCCGCGGGCGACGTCGGCCGCTAGCGATGGCGACGTCGTCGT CGGCGGGGGCGCGCAAGAAGGCCCCCAGCCCCCCGAAGCACCGCCACGATGGCACCTCGC CGCTGCCGCTCGGCATGGACTGGAGCCCTCCCCCGAAGAGATGGGTAAGCGCCCGCGACC CCCTCCCCCATCTCTCCTACCGAACCTCGTTGAGCTGCGCCGTCCGGCTCATCTCAATCT GTGTGCCGCTTTGATCACGGATGCAGACACGGGTCTCGCCAGGTGAGTTACTGCCTACTT CAAGGGCTAGATTTGGTGCTGGTTCGGTCCGCTCCGGGGATGTAGATGTGGTTTACTGGG TTGTCGATTATGGGCAAGCGTTTTCCACATGAATTTTGCTGCAGCTAGCGTGCTAGTATA TTGGTGCAACCTGTGTCCAGGTATCAATGTGCGGGCTGGGATCTGCAGTAAAATTCACCA AAAGGCGACCCGTTGTTGGTGTTGATGATTAAGTAACTTAGAGCTTTCCTTAAATTAGGG TTTTGGATTTCTCGTGTTTCACTGGCAAACAGTAGAATATGCCCTTCACAAATTAGTTTA CTTGGCGTGGGATTGAATGAGTCAATTTCATTTTTGCCCCTTTGTTCAGTTTACTAGGGT TTTGGATTATGTTTCTCTTGAAAGGAGTTGATTATATATTCCATGGTGTACTTTTGCTGA GTGGGATTGCGAAAATCAGATGTACCCAAGTTTCGAAAGATTTGGAGGAGTTTTATACGG AGTTGTATTTTGAAATATAGGACTAACGCCAAAAAACTGCTCCAACAGGGGTTCTATTTC ACAAAAAAACATCAAATAATTATTGGACTCGGCCTCTCAGGTCCTAAATATAGGACACCA TATGCTGGAGCCTTATCCTCGTTTTTGTATGTTATTACTAGCCTTTTATTTCCTAAATAA CATGATCTATTTCCTAACAACATTGGCATATGACTCAACTGTTGGAGCTGTAAATGTTTT TGTGGCCCTAAACACTTCAAATCGATCCTATTTTAATTTTTAGGTGTCAAATATAGGACT TCTGGTTGGAGATGCTCCTAGTCAGTAGCTGTCTTCTCTTCTGTGGAGTCTTGAGTGTAA CTTTGCTTACCTGGAATATAGCTGGCAAGTTGTAATTCATCTGGCTGATTGATTGATCCT TTCCATGTTATCATTTAAATTTCTTCCTATGTTGTTCCAATGATCACTACTGGCTGAAAT AATTATGCATGCTTGATGGACAAAATTTGCTAACGCCATGCATATGTGGCAGAATTTCCA TGAAAAGCTGTCCATGCTCTAGCAGGTTTCCATTAGTTAAGAAACATTCTATCTACTCAC TATATTATTTGTTTCAACACACCTCTGAAACTATCTTTTGGTCAACGCATCTCATGGGCT CATTGCCTATTGACTGCATACAGGAGGGAAGGAACACCATATGGCCACATAATCCTCAAA CAGGTTGGAGTTACTGTGTGATGATACCTTCTTGGATCACTCAAACACCTGAAACTGGTG TGACCGCTGATAGCTTTTTGAAATCTGTCGTTTTTTACAGGATACATGTCGGTATACAAT CTCCAGAAGGCTTTAGCTCTAGCCATGGAATTCTCAGAAGGTTTAGTGACTTTCTGAATC TATCTTCTGATCTTAAGAGCGCATTTCCCAGAAAAGATGCCCCGTCGGCTCCTCCGAAGC ATGCTTTCTTAAGAATAAATTCAAGCAGGTTGCTTCTAGAAGAGAGAAGGCATGCATTGG AGGAGTGGATGCAAAAGTTACTTTCTGACATTGACTTGTCAAGAAGTGCTCCTGTTGCTG CTTTTTTTGAGCTTGAAGCTGCTGCACGTTCATATTTCCAAGAACGGAATGGGCGTCCTT CTGAAGTAGGTTCTTCTACAAAAAGCAGTACTGCCTCTTCTCCACATCCTGATGGACCTG CTTCTGGTTCTCTTGCTGAGTCCAATCAAATAAATCAAACTCTTACTCGTGGCAGCAGTC TGACAGGAGCAACTGGTAATGGTGTGCTTGGAGAAGCTATCTTAGATCAGTCCGATGAGC TTGTTAGTAATGCCTTGAATCACAGGAAAGGGAACCTTGTATTGGAACATGATGGTAGGA ATGGTTCAGCAGCGTCTTATAGGGGAGTTGTTTCAGATGAGGACCGTGTATCTAATCCCG GCCATGCTAGGAAGGACTCTGCTGAAAGTATTGGGAGTGATTTGAGTTCTTTAAGAGGAA TTGAATTATCTATTCCAGGGGTTAGTAGTTCCCTTTGGGATGGTGCTGTGGTGGATGGAC ATATTAGTCAAACAGAACATCTTACTGGTTTAGATATGCATCTTTTGTATGATATGGATG CACAAGTCATCCTTCCAAATGATCAAAAACAGAAGTTGACTAGACTTTTGATCACAATGC AACAAAGAATAGGGGCAGCAAAAACTGATATGGAGGATCTCATAGCACGACTAAATCAGG AAGCAGCTGTTAAAGAATATCTTACTACAAAGGTTAAGGATTTGGAGGTTGAATTGGAAG CCGCAAAGCAAAAGGGTAGAGAGACACTGCAACAAGCTATCCTGACTGAAAGAGAGAGGA TTACCCAGATGCAGTGGGATATGGATGAGCTCCGTAGGAAGTATTCTGAGATGGAGTCAA ACCTGAAGGCTGAACAAAATGAGAAAACTCGTGCAGAGTCAGAGAAAACAACCGCTAGTG ATAAAAATGAAACATTACTTGAAGAATTAGAAATCAAACGAAAAGAAGTCGAGACTTTGA AACATCATCTTGTAGAAGCTGAGGCAAAGTCTAAAGCAGATAAGAAAGTTCTTGTAAAAG AGGTCAAGTCTCTTAGAAACTCCCAAACAGAGATGAAGAAAGTGTTGAATCAGTATCTTG AACAGAAGACTGGTTTAGAGAGAGTTATTATTAGAGATAAACAGAGGTCAGCACGTGCAA AGTTATGCCGAGTGAAATTTCTTCATGAGTGTCGACTGCTGCATGAGCGTCTACTGGAAT GTAGTGCTAAATTTCTAGCAGAAGAACAAGGCAATTTTACTATTGATCCTTCGTCCTTGC CTGATGCATTAGATCTTCTAGCAACATCAGACAATAGAGTACGCTTACTCATTGCTGAGG CTCAACTTTTAGCACGAGATGATGAACAAGGCTCTTCTGATGATGGCGACAATTCTGATA GCATATCGTCATTAACTATGAGCTGGGAAGATGCAAAAGTTACAGATGAAGATGCAACGA AAATACTTTCTGATCTACTTATTGACAACGCGCAGCTGAGGCTGCGTCTTAATGCTGTCA TCCGCAACGCTGTAAATACTGCCGTGAAGCCAGAGAAAGAAGGTAGTGGCGAGGTTCTTC CCAAAAAGACAGTCCTTAACTGGTTGTTAGACAGATGAGAACACCTATGTATATTCCTGT GATTTAGGTTTCAAACTTACGCGGCTTGACCAAAATTATATGATGAGCATACCTATATAG TGCCAGGGCAGCATCAGGATAAAAGTTTCCGGCCATGAGGGAAGAAGATCCTGGAGAAGC GTGCGTTGCTGCTGTACGGTTGTTTATTTACACATGGAAATATCGGAGGATAGTATATTT AGGCCCGTTTGGTTCAGGG