Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d036741_T049
CDS Infomation	cds chromosome:B73_RefGen_v4:6:99532688:99541121:-1 gene:Zm00001d036741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase cytoplasmic
Sequence	ATGGACGACGTGTGCGAGGGGAAGGACTTCTCCTTCCCGGAGCAGGAGGAGCGGGTACTC GAGCTGTGGGCGAAGCTCGACGCCTTCCACGAGCAGCTCCGGCGCACGGAGGGCGGTGAG GAGTTCGTCTTCTATGACGGCCCCCCCTTCGCCACTGGTCTGCCCCACTACGGCCACATA CTCGCCGGCACCATCAAGGACGTGGTCACCCGGCACCAGTCGATGCGGGGCCGCCATGTC TCGCGACGGTTCGGGTGGGACTGTCACGGCCTCCCCGTCGAGTTTGAGATCGACAAGCTG CTCGGCATCACCAACCGGCAGCAGGTGTTCGACCTCGGCATCGGCAAGTACAACGAGACG TGCCGCAGCATCGTCACCAAGTACGTCTCTGAGTGGGAGGCCATGGTCACACGTACGGGG AGGTGGATTGACTTCAAGAACGACTACAAGACCATGGACCTCAACTTCATGGAGAGCGTC TGGTGGGTGTTTGCGCAGCTCTGGGAGAAGGACCTCGTCTATAAGGGCTTCAAGGTCATG CCTTACAGCACAGGATGCAAAACTGCACTGTCAAACTTTGAGGCAGCACTGGACTATAGG ACTGTTCCTGACCCAGCGGTGATGGTATCCTTCCCTATTGTTGGTGATATGGACAATGCA GCTTTTGTTGCATGGACTACAACACCCTGGACACTTCCAAGTAACCTAGCGCTGTGTATC AATGCCAATCTCATGTATGCAAAGGTTAGAGACAAGTCAAATGGAAAAGTATATGTTATT GCAGAATCTAGGCTTGGGCAGTTACCAGTTAAGGCCAAAGCTTCAGGAAAGAAGCAGGCA CCTTCAAAGGGAAGCAATGCTGAAGCTGCTCAGGATGGTTTGGATAAGGAATCATATGAG CTGCTGGTAAAGATTCCTGGGCCATATTTGGTTGGCTTAAAATATACTCCCCTATTTGAT TTTTTCATTGAACTACAAGAGACTGCCTTTAGAGTGATTGCGGATAACTATGTCACCGAT GATAGTGGAACTGGCGTTGTCCATTGTGCTCCTGCATTTGGTGAAGACGACCATCGTGTT TGCCTTGCTGCTGGGATATTTGAGACTGCTGGACTTGTTGTCGCTGTTGATGATGATGGG TGCTTTATTGAAAAAATATCTGATTTTAAAGGGCGATATGTCAAAGAAGCTGACAAGGAT ATCATCAGTGCTGTTAAGGATAAAGGAAGACTTGTTAGTAAAGGGAGCATTGAACACTCT TATCCATTTTGTTGGCGATCGGGTACTCCTCTTATTTATCGGGCTGTTCCAAGCTGGTTT GTCAAGGTTGAGAAGATTAAAGACCAATTGCTGGAATGTAACAAGGAGACTTACTGGGTG CCTGACTATGTTAAGGTATTTTATGGCTTTTTGCTCCTGGCAGGGCCATGA

Peptide Sequence

PEP ID	Zm00001d036741_P049
PEP Infomation	pep chromosome:B73_RefGen_v4:6:99532688:99541121:-1 gene:Zm00001d036741 transcript:Zm00001d036741_T049 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase cytoplasmic
Sequence	MDDVCEGKDFSFPEQEERVLELWAKLDAFHEQLRRTEGGEEFVFYDGPPFATGLPHYGHI LAGTIKDVVTRHQSMRGRHVSRRFGWDCHGLPVEFEIDKLLGITNRQQVFDLGIGKYNET CRSIVTKYVSEWEAMVTRTGRWIDFKNDYKTMDLNFMESVWWVFAQLWEKDLVYKGFKVM PYSTGCKTALSNFEAALDYRTVPDPAVMVSFPIVGDMDNAAFVAWTTTPWTLPSNLALCI NANLMYAKVRDKSNGKVYVIAESRLGQLPVKAKASGKKQAPSKGSNAEAAQDGLDKESYE LLVKIPGPYLVGLKYTPLFDFFIELQETAFRVIADNYVTDDSGTGVVHCAPAFGEDDHRV CLAAGIFETAGLVVAVDDDGCFIEKISDFKGRYVKEADKDIISAVKDKGRLVSKGSIEHS YPFCWRSGTPLIYRAVPSWFVKVEKIKDQLLECNKETYWVPDYVKVFYGFLLLAGP

Transcript Sequence

Transcript ID	Zm00001d036741_T049
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:99532688:99541121:-1 gene:Zm00001d036741 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isoleucine--tRNA ligase cytoplasmic
Sequence	AGCGCCCAGCTGACCTCTAAACCCTTGTCTCCCTCCCCCAAGTGAATCCGTGTTGTACCT CTCGCCGCCGCCGTACCATCGCCCGAAATCCTAGCCCCATTCACCGCCTCGCTCGGAATC CAAGCCCCATTCGGCGCCGCCGCGACCGCCGGACAGGAGGTCATGGACGACGTGTGCGAG GGGAAGGACTTCTCCTTCCCGGAGCAGGAGGAGCGGGTACTCGAGCTGTGGGCGAAGCTC GACGCCTTCCACGAGCAGCTCCGGCGCACGGAGGGCGGTGAGGAGTTCGTCTTCTATGAC GGCCCCCCCTTCGCCACTGGTCTGCCCCACTACGGCCACATACTCGCCGGCACCATCAAG GACGTGGTCACCCGGCACCAGTCGATGCGGGGCCGCCATGTCTCGCGACGGTTCGGGTGG GACTGTCACGGCCTCCCCGTCGAGTTTGAGATCGACAAGCTGCTCGGCATCACCAACCGG CAGCAGGTGTTCGACCTCGGCATCGGCAAGTACAACGAGACGTGCCGCAGCATCGTCACC AAGTACGTCTCTGAGTGGGAGGCCATGGTCACACGTACGGGGAGGTGGATTGACTTCAAG AACGACTACAAGACCATGGACCTCAACTTCATGGAGAGCGTCTGGTGGGTGTTTGCGCAG CTCTGGGAGAAGGACCTCGTCTATAAGGGCTTCAAGGTCATGCCTTACAGCACAGGATGC AAAACTGCACTGTCAAACTTTGAGGCAGCACTGGACTATAGGACTGTTCCTGACCCAGCG GTGATGGTATCCTTCCCTATTGTTGGTGATATGGACAATGCAGCTTTTGTTGCATGGACT ACAACACCCTGGACACTTCCAAGTAACCTAGCGCTGTGTATCAATGCCAATCTCATGTAT GCAAAGGTTAGAGACAAGTCAAATGGAAAAGTATATGTTATTGCAGAATCTAGGCTTGGG CAGTTACCAGTTAAGGCCAAAGCTTCAGGAAAGAAGCAGGCACCTTCAAAGGGAAGCAAT GCTGAAGCTGCTCAGGATGGTTTGGATAAGGAATCATATGAGCTGCTGGTAAAGATTCCT GGGCCATATTTGGTTGGCTTAAAATATACTCCCCTATTTGATTTTTTCATTGAACTACAA GAGACTGCCTTTAGAGTGATTGCGGATAACTATGTCACCGATGATAGTGGAACTGGCGTT GTCCATTGTGCTCCTGCATTTGGTGAAGACGACCATCGTGTTTGCCTTGCTGCTGGGATA TTTGAGACTGCTGGACTTGTTGTCGCTGTTGATGATGATGGGTGCTTTATTGAAAAAATA TCTGATTTTAAAGGGCGATATGTCAAAGAAGCTGACAAGGATATCATCAGTGCTGTTAAG GATAAAGGAAGACTTGTTAGTAAAGGGAGCATTGAACACTCTTATCCATTTTGTTGGCGA TCGGGTACTCCTCTTATTTATCGGGCTGTTCCAAGCTGGTTTGTCAAGGTTGAGAAGATT AAAGACCAATTGCTGGAATGTAACAAGGAGACTTACTGGGTGCCTGACTATGTTAAGGTA TTTTATGGCTTTTTGCTCCTGGCAGGGCCATGAGGTCCATACCTTGTATGGAAAAATGTC ATATGTGAACACTCATAGCCCTGGACCGTATTTTGAGACCCACATTTAGAATTTAGATGG CTATGAGGGTATCTCACATGGGCTATAGGCTTGTACCAGCTCCTGGTTCACCGGGAACAA CTTCACTCCATGAATTTTTACCCAAACTCTATAGCTCCTCGAAATATGGATTCACCAAAA TGGTGGAGCTAGGAGACATATTCACCATTTTGGTGGAGCTCCTCAAGGGATGCTCCATGA AAGCTTGTTTCTTACCTCCTTGTGGAGTTGGGTGGAAATTACCTACCAATGCCACGGGTT ACACACTCCCATCTCATACAGTTTTGTTCTATTTGATTCTACCCTGTCGACCAAACCACC AACGAAAAAAGACCCTGTGGCTACCGTTTCTTGCCCCCTGCACTGGTGAGCCCCACAGCT CCATCAAGCCAGCGATGATCGGATCTGGTGGATCCGGTCGCCCTCTACCTCCCCCACCCC CTTCTTCATTGGTCGACTCCTTTGTTGTAGGGGAATGGGAGGGAGGTTCGCCGGGGTGCC TTGGGCGGCCAAGATGGGTGGCCGATGGTCTGGGAGATGGATATCTCCTGGGTCCTCATG GTCCGCATGAACCATTGAAGGGCATACGCAGGCCGCGCGATTGATTTCATGGGCCGACCA GTCGACTCAGGCCCGGAAATAGCATGAAGACTTGGGGACCAAGGCGAAGCAGCGACTCGA CTATTCCAGGATAAGGAAGCGCAGAGACTCACGTGCAACTCGAAAACAGACCCCCGAGAG CGTAGGGTTAGTGTTAAGGAAGGGAACTAACTTGTAACCCTAAACCTGTCGGCTTGTATA AGGCGGGTTAGGGACCCCTACGATCTAGATCGGATACCCTCACCTCGTAGCCCACTCACT CTGAAACTCTAGGCTAGCAGTGCGGCCTCTAGCCTAGTGGTTAAGGACTTCCGAGTAGCA CCTCCAAGTCCTGGGTTCGATTCCTCTCGGGAGCGAATTTTCAGGCTTGGTTAAAAAAAA TCCCCTCGCTGTGCCCCATCCGCTCTTGGGTTACGATGTCCTGTGTGCCACCCTCCGGTT GGGCCGTTGCAGAGTGGACAATTGACGCTGGCCCGTTAGTGATGGGGGGCCAAGGTTCGG GGATTTTCTTGGCCGGGAGCATTGTTTCGGTCTCTTCTTAATATAATATTGGAAGGGCGG TCTTTCCCTCCCCGGTCGAGTTTTTTATTGTAACTCTAGCTCAGAGCAATACAATCTCCA CCTCACATAGGACTTAGGGTTTTACGCCTTCTGGCTGCTTGAAATTGTATAATTCTTGTG TCCTGTCACGTTCCACGCGAACCATCGAGCTATAGTTGATCTCGCCAACCATCAAAAGTA CCGCATGGTATATCAGTGGTGTACTGCCCTGCCGGCACCAAACACTAATAGGTGGTGCTA CGCGTTCACACAAGGGCCATAGGGAATTAGGGATGGGCTTGAGCGGCCCACCCAGGGTGC TTCACCCAGTGGCGGTGGCTTGCTTCAACCAGAGTTGCGCGGGGCGGTAAAACGGATGGG AGCAAGACAAGAGCAATTGGCCGGTGGCGGATATGCTAGATATAGTTGGGCTGGGGCGCA CCGGAGGTGGTGCTGTAGGGCAGAGGCTCGACCGGGATGGCCGTGATGGGCAAAACAGGC CAATCCATCTAAAAGCTCGGTTTTGTGGATATGGCACTGCTGTGTAGCCAAACAGTTCCC TGGTAGATCCACGGTGGATCTCAGATCTATGGTAGAGCTGCCCCATGGTGAATTGGTATT CAGATTCACTTTTCTAGTGCTAGAGCTCTGCCAAAGAGGCCCTATATAGGTTCTGTATTT TGTGACTATGGAGGTATATTGCAGGGAGGCATGTACTCCTGTCCCAACTAAACACACACC TTGCACTTTGAGGGATCATCCAGTCTCAAATTTGACCACAATATGTACAATAAGCACTAA TGTTTATGATACCAAATAAGTGTCATTAGATTAATTACTCCATATATTTTCATAGTAAAC CAATTTAGAAATACAATTGTTGATACTATTTTTTATAAACCTAGTCAAACTTGAGATTGG TTGAATCCTTGGATGTATTCTACATTGCTACAAGCCTACAACTTGTGTTAAGGCTTGTTG AAGGACCTGTTGATGTATCGTATGGCATGGGTCAAAGCTCAACAGGCCAAGTAGGCGTGT AGCAACCAAATATAGTAACTCCTGAATTAGTTTTTTTTCTGAAGATAAGATTAACTAAGA GCATCAGATTACTCCCTCCTTTTAGCAGGTGTATTTTATTTCGTTAAGGTGAGCATTTGT CCAACAATTTCTTTATTAATACATGACTTTGCAGTATAAATTGATGCAGCTAGTTTTGTA TTGAAAAAAATACTTGTGATTATGATTTTGGTTTATCACATTAATGGCATGCTAATAGAG TAATTGTTGTTCAAAGTTTTATCCTAACGAAACTAAATACACCTACTAATTTAAGCAGAT GGATACTTAGTTTGTTCTCACTTCTCAGTGATTTTCTGCTGTACTGGCCATACCCTTTTA AGGGGCTGTATGAGTCGCCTACACTTATTCTTCTTTATAATGATATGCAGCTCTCTGCCT CTCCGCATGTTCAAGAAAAAAATTAAGCGGATGTAGTAGATTTGAGTATTTACATGAGTC ATTTGAGTGCTAGGGCTAGCTGTATATGTAATAATCTAGATGTATCAGTTTTATTAATGA AGAATGGCCCTGTTTGGTTTCGAAGTGAGTGACCACAGCGTGCAGTGGGTGAGCGTGGTA CAAAGAATCAAAGTCACAGTTCATTCTCGTGGTGGATGGGAGGGGGGAATGGAACAATCG AGGCTATCGCAGGGTGTTTGGCGACTTCTGCTCGACTGTTGTGTTCAACATAATGAACCA TTAGGAATAAGTGGCCAGTACCTGAAATTTTATAGTCTAGATCAAGATCTGCTGATCTGC ATAAGAGCATTTCCAAAAGTCTGCATAATATTAGATATCCTATTTTCTCATATAGCGTCC ATCCTAAACATAAATCCACCTTAAATTCTTTTTTCCCATAGCAGTTCCCCTAAAATCAAC CTCCTATTTTTCTTAAGATAGGGTGGATGGGTAGTGTCTTTGAGGTAGGAGGATGATTTA GGGTGCCACTAAATTTAGGTTGTTGGACACAAGTACTGTTGGAGATTGCATAAACGGATA AATCTTATTTTTTACAATAGTATGGTTTTTTTCTTGAACGCACATGAGAGCTGCGCATCA TTAAATTAAGAGAAGAAAAGAGTCCAAAATAGACCGAAGTACAAAGCCGAAAAGGCAGAA CAAACAGACCCATCAACTTCCTGTTGAGCACAGTGCCCCAGCCTTCTCTTGCGCATGAAA AACAGCACGAAACAAGAGGAGGCAAACAGCAAAAGTGCCAGCAATCTCCACATGCACATC TCCACTACTCACCCAGAAACTCCCTGGACCTAATAATGGCAGCACCTAGACCTAAGCCCT CAAGATGCTTGCCACTGGCTAAACCCCAACAATCTAACTCTTCCAAGAAAACTCTTTTAG TTCTGC