Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036641_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:95981467:95983819:1 gene:Zm00001d036641 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:math-btb23 description:Speckle-type POZ protein

Sequence

ATGGAACATGACGGCACAACGAACCTGGCTGTCACTGAGGCTGTGCGCTCGGTGCAGCTG
CTCAAGATCGACGGCTACTGCGCCACCGCTACCATGGGGGCATCGGAGTTCATCAAATTC
CGATGGCACATCGATGGCCACGAGTGGGAGGTCCGTTTCTATCCTGATTACTGGTACTTC
TTCGAGGACGAGGACTGCTTCGGCACTTATGGCGACGACGATCACTCCGAGTGGGTAGGT
CTGAAGCTCATCCTTGTCAGTGAACCCCAGAGGGACGACGACAAGGTGAGGGTGAACCTG
AGCTGCCGGCTTGTATGCCCCAGCCCCACCAGCCAGCGGCCGCATCTCGATACCTGCTGG
TCCGAAGAGAAGAGGGTGTCCCATGTGTTTGCCAGCGACTCGAAATGCTCGCCTGAACTT
CTCCTCATCCTGAAGCACGAGCTACCATCGTCAGGTTATCTCGTGGACGATTCACTGACC
GTGGAATGCACGGTCACCGTGCTACGCGACTTGGACGCCGCCACGGATAAGGCGCTGTCG
TCCCTGCCAGTGCCGCCACCCTCGGACCTACACCAGCACCTCGGCGACCTCCTGCAGAGC
GAGGACGGAGCGGACGTCACGTTCCGTGTCTCCGGGGAGTCCTTCGCCGCCCACAGGGCC
ATACTCGCCGCAAGGTCCCCTGTTTTTAAGGCCGAGTTCTTCGGAGGCATGGAGGAACGC
AGCTCCGCTTCTGTGGAGGTCAAAGGCATGGAGGCTGCTGTGTTCAGGTCCATGCTTCGC
TTCATCTATACCGACACGGCTCCAGAGCTCGACGGTGCCCAGGACCAGGAGCCTGAGGCG
GCGGTGGCCATGGCTCAGCACCTACTGGTAGCTGCTGACAGGTATGGGCTGAACAGACTG
AAGCTCATGTGCGAATGCAAGCTCTCTGGCGGCATCGACATCGGCACAGCGGCCGCGACG
TTGGCTCTCGCCGAGCAGCACAACTGCTCGCTGCTCAAAGCCAAGTGCCTTGAGTTCGTC
ACCAGGTCGCCTGAGACTCTCGATGCTATCCTGGCGACTGACGGCTACGAGCATCTGGTG
GCAAGCTGCCCCTCGGTGCTGGCTGAACTGCTGAGGGCTGCGCGTGGAAGGAAGATCTGA

Peptide Sequence

PEP ID

Zm00001d036641_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:95981467:95983819:1 gene:Zm00001d036641 transcript:Zm00001d036641_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:math-btb23 description:Speckle-type POZ protein

Sequence

MEHDGTTNLAVTEAVRSVQLLKIDGYCATATMGASEFIKFRWHIDGHEWEVRFYPDYWYF
FEDEDCFGTYGDDDHSEWVGLKLILVSEPQRDDDKVRVNLSCRLVCPSPTSQRPHLDTCW
SEEKRVSHVFASDSKCSPELLLILKHELPSSGYLVDDSLTVECTVTVLRDLDAATDKALS
SLPVPPPSDLHQHLGDLLQSEDGADVTFRVSGESFAAHRAILAARSPVFKAEFFGGMEER
SSASVEVKGMEAAVFRSMLRFIYTDTAPELDGAQDQEPEAAVAMAQHLLVAADRYGLNRL
KLMCECKLSGGIDIGTAAATLALAEQHNCSLLKAKCLEFVTRSPETLDAILATDGYEHLV
ASCPSVLAELLRAARGRKI

Transcript Sequence

Transcript ID

Zm00001d036641_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:95981467:95983819:1 gene:Zm00001d036641 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:math-btb23 description:Speckle-type POZ protein

Sequence

AATTTGCCGACGTGGTAAAGCAGCCTGCCTGCTCATGTTCTTTCGGGTGCAAATCAGATA
GTAAAGCTGCGCTGAGTTACCATAAAAAGAAGAGAAAAAAACAGTCTATCCTGAGTTCTC
GATCGCGCCATTCAATCGGATAAAGCTGTGTTGAGTTGCAGAAAATCAGTCTTTGATCGT
CTGTGTTTTCCTGATTAAAGCAGCGCTTTGTTGCTTTAGATAGAGGTAGAGCCATGTGCG
GCGCTTTTCAGGCTGGTTCTTTTTCGAAAACCGGTTTCCCCCACTCCACACCACCACCAC
CACCATTGACGACTTGACTACAAAGCCCAGATCCATTCCTCGGGGTCGGGCGGCCGCCAA
TCCCGCCGCATACCGCTGGCCGAGTCCTCGTCGGCGCCGGACGGGGTGAAGTGAAGGCCG
ACTGGGAGAATTTTGTGGATCTTATCTGGTCTCCATCATGGAACATGACGGCACAACGAA
CCTGGCTGTCACTGAGGCTGTGCGCTCGGTGCAGCTGCTCAAGATCGACGGCTACTGCGC
CACCGCTACCATGGGGGCATCGGAGTTCATCAAATTCCGATGGCACATCGATGGCCACGA
GTGGGAGGTCCGTTTCTATCCTGATTACTGGTACTTCTTCGAGGACGAGGACTGCTTCGG
CACTTATGGCGACGACGATCACTCCGAGTGGGTAGGTCTGAAGCTCATCCTTGTCAGTGA
ACCCCAGAGGGACGACGACAAGGTGAGGGTGAACCTGAGCTGCCGGCTTGTATGCCCCAG
CCCCACCAGCCAGCGGCCGCATCTCGATACCTGCTGGTCCGAAGAGAAGAGGGTGTCCCA
TGTGTTTGCCAGCGACTCGAAATGCTCGCCTGAACTTCTCCTCATCCTGAAGCACGAGCT
ACCATCGTCAGGTTATCTCGTGGACGATTCACTGACCGTGGAATGCACGGTCACCGTGCT
ACGCGACTTGGACGCCGCCACGGATAAGGCGCTGTCGTCCCTGCCAGTGCCGCCACCCTC
GGACCTACACCAGCACCTCGGCGACCTCCTGCAGAGCGAGGACGGAGCGGACGTCACGTT
CCGTGTCTCCGGGGAGTCCTTCGCCGCCCACAGGGCCATACTCGCCGCAAGGTCCCCTGT
TTTTAAGGCCGAGTTCTTCGGAGGCATGGAGGAACGCAGCTCCGCTTCTGTGGAGGTCAA
AGGCATGGAGGCTGCTGTGTTCAGGTCCATGCTTCGCTTCATCTATACCGACACGGCTCC
AGAGCTCGACGGTGCCCAGGACCAGGAGCCTGAGGCGGCGGTGGCCATGGCTCAGCACCT
ACTGGTAGCTGCTGACAGGTATGGGCTGAACAGACTGAAGCTCATGTGCGAATGCAAGCT
CTCTGGCGGCATCGACATCGGCACAGCGGCCGCGACGTTGGCTCTCGCCGAGCAGCACAA
CTGCTCGCTGCTCAAAGCCAAGTGCCTTGAGTTCGTCACCAGGTCGCCTGAGACTCTCGA
TGCTATCCTGGCGACTGACGGCTACGAGCATCTGGTGGCAAGCTGCCCCTCGGTGCTGGC
TGAACTGCTGAGGGCTGCGCGTGGAAGGAAGATCTGAGCTGGACGATGATTTCATATTAT
GGTTTGCCTAAGATGTGTGTGAACTAAAAACCATGCATGATGAACTAGTAGTGCTTGCAG
TTGATTTCCTGCCCCTCCTTTCAGTTTGACCTGCGCTTGTCATACATGTATTGTATGCAC
ATACACGAGACGGGCAGCTAGCATTTTCTGTGGTTAGATCTCGTCTCGGCTTTGTGCCTG
TCATTTGGGGGCTTAATTGTACCGGTTGCCGTTTCTCGTTCTTCTCATGCATGTATTGTA
CGCGCAGCCACACGCATGACATGAGCAGACTGCTGCTGCTTCAGTCGCAACTAGTACACA
AGATTCAGAAAACTCATCTTTAGAGCAGTCAGTTTCTGGGGGAACAGGGCAACAGGCAAC
TCCAAAACTCGATCACAGTTGTCAACTGCAGTGTGGATTTCGAGGGCAGTTAGGCCTTAT
TCTATTATTTTCATTGGATGCGATTGGAAAAAAAATAAAAACAATTTTAAATTGATTGGA
ATTTAAATCCACTCAATCTTGTTCAATCCACATGGATTGAGATT