Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036531_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:91287268:91293442:1 gene:Zm00001d036531 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A 32 kDa subunit A
Sequence

ATGGCCTCCTACTTCGCCGGTCCGGCCATCGTGCCGTCGCAGCACGCCACCGCGGCGCCC
GACAATTCCGCGGTCGCCACCCCTTCTCCGGCTAAGTCGCGTGACCCCCGCTTCTCCGGA
TCCGCCTCCACCACCGTTCGTCACATCGCCCGCTCCTTCGCCGCCGCCGACGCCACCGGT
GATGGCGACCTTGTCATCCCTATCGACGGCGTCGACGCCACCAACGTTTGGATTCTGGGG
AGGGTGGTGAGCGTGGTGAACATGGAGGCCAGCGTGTCGTTCACGCTCGACGACGGCACC
GGGAAGATCGCGCTCACGCGGTGGATCGCTGAAGATATTGATGCTAAGGAAGTGGCTTTC
GTTCAGAATGGTATATACCTCAAGGTTCAAGTTACTCTCGTAGGGTTTCAAACTAAGCAG
TATGGTTTTGCTCGCGCTATTCGGCCTGTTACCAATTTCAATGAAGTGGCGCTGCACTTC
ATTGAGTGTATTTATTTGCATTTGGAAAATGTACGGCAAAAGATGCAAGGTCAATTCCCT
CGCTCCATTCAAGCAAATGTGTCTACTTATGAGATGCAAGCTCAAGTTGCTCACAGTATT
CAAACAAAATCACCTGCTTATATGCCCTTTTCTGGTGGAGCTAGAGAGCATCAAGTTGAT
TTTGCTCCTGAAGTAAACCATGGGCGATTCCTTTCATCAGTTCAAACAAACACACCTACT
CATGTACCCTTTTCTGGTGGAGCTAGAGAACAGCAAGTTCACTTTACTCCTCAACCAAAT
CAATTTTCAGCTTACCCAGGTACAGGTGGTCATCAGCACGATCTGCAGAGTATGGTTTTG
GAGGTTATGCAACGACCAGATATACTTGCACTTGAAAATGGAGTACATGTTGATGAAGTG
GCAAGGAGACTTGGAATGCCAAGCGCACAAATTCTGGCCACCGCCCAGCGTCTTGTCAAT
TTGGCATGCCTCTGTTCCACTATTGATGATTATCATTTCAAGTCTATTAAATGA

Peptide Sequence

PEP ID

Zm00001d036531_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:91287268:91293442:1 gene:Zm00001d036531 transcript:Zm00001d036531_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A 32 kDa subunit A
Sequence

MASYFAGPAIVPSQHATAAPDNSAVATPSPAKSRDPRFSGSASTTVRHIARSFAAADATG
DGDLVIPIDGVDATNVWILGRVVSVVNMEASVSFTLDDGTGKIALTRWIAEDIDAKEVAF
VQNGIYLKVQVTLVGFQTKQYGFARAIRPVTNFNEVALHFIECIYLHLENVRQKMQGQFP
RSIQANVSTYEMQAQVAHSIQTKSPAYMPFSGGAREHQVDFAPEVNHGRFLSSVQTNTPT
HVPFSGGAREQQVHFTPQPNQFSAYPGTGGHQHDLQSMVLEVMQRPDILALENGVHVDEV
ARRLGMPSAQILATAQRLVNLACLCSTIDDYHFKSIK

Transcript Sequence

Transcript ID

Zm00001d036531_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:91287268:91293442:1 gene:Zm00001d036531 gene_biotype:protein_coding transcript_biotype:protein_coding description:Replication protein A 32 kDa subunit A
Sequence

ACCCCACTCGAAACAAATCCCCTCGTCATCGTCCCCACCGAAACCGCAGTACCACCGTAC
CCGCGCCGACGTGAGTACGATGGCCTCCTACTTCGCCGGTCCGGCCATCGTGCCGTCGCA
GCACGCCACCGCGGCGCCCGACAATTCCGCGGTCGCCACCCCTTCTCCGGCTAAGTCGCG
TGACCCCCGCTTCTCCGGATCCGCCTCCACCACCGTTCGTCACATCGCCCGCTCCTTCGC
CGCCGCCGACGCCACCGGTGATGGCGACCTTGTCATCCCTATCGACGGCGTCGACGCCAC
CAACGTTTGGATTCTGGGGAGGGTGGTGAGCGTGGTGAACATGGAGGCCAGCGTGTCGTT
CACGCTCGACGACGGCACCGGGAAGATCGCGCTCACGCGGTGGATCGCTGAAGATATTGA
TGCTAAGGAAGTGGCTTTCGTTCAGAATGGTATATACCTCAAGGTTCAAGTTACTCTCGT
AGGGTTTCAAACTAAGCAGTATGGTTTTGCTCGCGCTATTCGGCCTGTTACCAATTTCAA
TGAAGTGGCGCTGCACTTCATTGAGTGTATTTATTTGCATTTGGAAAATGTACGGCAAAA
GATGCAAGGTCAATTCCCTCGCTCCATTCAAGCAAATGTGTCTACTTATGAGATGCAAGC
TCAAGTTGCTCACAGTATTCAAACAAAATCACCTGCTTATATGCCCTTTTCTGGTGGAGC
TAGAGAGCATCAAGTTGATTTTGCTCCTGAAGTAAACCATGGGCGATTCCTTTCATCAGT
TCAAACAAACACACCTACTCATGTACCCTTTTCTGGTGGAGCTAGAGAACAGCAAGTTCA
CTTTACTCCTCAACCAAATCAATTTTCAGCTTACCCAGGTACAGGTGGTCATCAGCACGA
TCTGCAGAGTATGGTTTTGGAGGTTATGCAACGACCAGATATACTTGCACTTGAAAATGG
AGTACATGTTGATGAAGTGGCAAGGAGACTTGGAATGCCAAGCGCACAAATTCTGGCCAC
CGCCCAGCGTCTTGTCAATTTGGCATGCCTCTGTTCCACTATTGATGATTATCATTTCAA
GTCTATTAAATGATTGATCAATGTTACCATCTTCAAGACTTGGCATTTTAGATTATTGGC
AGTTTTTAGGTACTGAATAGCATTCGTGTATATGCTTTAAGTATGCACATCTAGTACATG
CATTTTTCTTTGTACAGAGCACTGAACACCTGTTTTTAGTTGCCAAGCTAGTTACTCAGA
TTGTCAGACATGCAGATCGGTTAGAAACTTAGAATGTCAAACCATTGGCATGCTGCAGTT
GCTGGATGGATCTGCTTAGTACTGTTTACTTGTTTACTAGAATGTCAAACCATTGCCAGG
CAAGTTACTCATCCATTTCTTTTCATGCTTCCTTCCGGTTGTCATGCTTGATCATCTTTT
CTAGGCCCCTTTTTATTTTTTTCTCGAAAGGCGTAGGAAAACTGCACCCCCATATATTAA
GAAGAATGAAAGAAGGTTATGCTTATGAGTTATGAA