Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036496_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:6:90597019:90602294:-1 gene:Zm00001d036496 gene_biotype:protein_coding transcript_biotype:protein_coding description:Choline monooxygenase chloroplastic
Sequence

ATGATGGCGACTGGCCGATCGCTCGCCGGGGTATACTCCGCCAGAGCCACCCGCCCCATG
CCTCTACGCGCCGGCGCACGGGCGCCCTGCGCCGGTGCCGCCGCGGCCGAGCCTGCGGCC
GAGCACGTGCGGAGGCTCGTGGCGGAGTTCGACCCGGCGGTCCCGCTGGACTCCGCGGTC
ACGCCGCCGAGCGGGTGGTACACCGACCCGGATTTTCTCCAGCTCGAGATCGACAGCGTC
TTCTTCCGCGGGTGGCAGGCTGTCGGTCACATATGGCAAGTGAAGAACCCAAATGATTTC
TTCACAGGAAGGCTGGGAAATGTGGAATTTGTCGTATGTCGGGATGCAAATGGGAAACTT
CATGCTTTCCACAATGTGTGCCGACATCATGCTTCACTCCTTGCATGTGGAAGTGGTCAT
AAGACTTGCTTCCAGTGCCCTTACCATGGATGGACATATGGATTGGATGGCACCCTTCTG
AAGGCTACAAGAATATCAGGAATTAAAAACTTCAATAAGAATGATTTTGGTCTCATACCA
ATCAAGGTGGCTACTTGGGGACCTTTTGTGTTGATCAGATTTGATGATGAGTCCACTGAA
GATAATGTTTATGACACAGTTGGAAATGAATGGTTGGGTAGTGCTTCAGATCTGTTGGGT
ACAAATGGCATTGACACTTCACTGCCGCATATTTGCAGGCGAGAATATATTATCAACTGT
AACTGGAAGGTCTTCTGTGACAATTACCTAGACGGTGGATATCATGTTCCATACGCACAT
GGGGATCTTGCATCGGGTCTGCAGCTTCAATCCTATGAAACACTTACATATGAAAGAGTT
AGTGTTCAAAGATGTGAAAGTGCACCAGCAGAACCAGATGACTTCGATCGCTTAGGGACA
AAAGCTCTATATGCCTTTGTTTATCCAAACTTTATGATCAACAGATATGGTCCATGGATG
GACACTAATCTAGCTGTCCCATTAGATTCAACCAGATGCAAGGTGGTATTTGATTATTTT
CTTGACAAGTCTCTGCTGGATGACCAGTGCTTTATCAAGAAAAGCCTCGAAGACAGTGAG
CAAGTACAGATAGAAGACATTGCACTGTGTGAGGGGGTTCAGCGTGGCCTGGAATCGCCG
GCCTACAGTGTTGGAAGATACGCTCCGTCTGTGGAGATGGCCATGCACCACTTCCACCGC
CTCATGCATGCTAACCTTAGTGAGTACTGA

Peptide Sequence

PEP ID

Zm00001d036496_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:6:90597019:90602294:-1 gene:Zm00001d036496 transcript:Zm00001d036496_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Choline monooxygenase chloroplastic
Sequence

MMATGRSLAGVYSARATRPMPLRAGARAPCAGAAAAEPAAEHVRRLVAEFDPAVPLDSAV
TPPSGWYTDPDFLQLEIDSVFFRGWQAVGHIWQVKNPNDFFTGRLGNVEFVVCRDANGKL
HAFHNVCRHHASLLACGSGHKTCFQCPYHGWTYGLDGTLLKATRISGIKNFNKNDFGLIP
IKVATWGPFVLIRFDDESTEDNVYDTVGNEWLGSASDLLGTNGIDTSLPHICRREYIINC
NWKVFCDNYLDGGYHVPYAHGDLASGLQLQSYETLTYERVSVQRCESAPAEPDDFDRLGT
KALYAFVYPNFMINRYGPWMDTNLAVPLDSTRCKVVFDYFLDKSLLDDQCFIKKSLEDSE
QVQIEDIALCEGVQRGLESPAYSVGRYAPSVEMAMHHFHRLMHANLSEY

Transcript Sequence

Transcript ID

Zm00001d036496_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:90597019:90602294:-1 gene:Zm00001d036496 gene_biotype:protein_coding transcript_biotype:protein_coding description:Choline monooxygenase chloroplastic
Sequence

AGGAAGGACCGCACTCCTTAGTCCTTACACCCACCACCACCAGACCCCTGTCGCACTCGT
GTGCCGGCCGGCGACGGCGATGATGGCGACTGGCCGATCGCTCGCCGGGGTATACTCCGC
CAGAGCCACCCGCCCCATGCCTCTACGCGCCGGCGCACGGGCGCCCTGCGCCGGTGCCGC
CGCGGCCGAGCCTGCGGCCGAGCACGTGCGGAGGCTCGTGGCGGAGTTCGACCCGGCGGT
CCCGCTGGACTCCGCGGTCACGCCGCCGAGCGGGTGGTACACCGACCCGGATTTTCTCCA
GCTCGAGATCGACAGCGTCTTCTTCCGCGGGTGGCAGGCTGTCGGTCACATATGGCAAGT
GAAGAACCCAAATGATTTCTTCACAGGAAGGCTGGGAAATGTGGAATTTGTCGTATGTCG
GGATGCAAATGGGAAACTTCATGCTTTCCACAATGTGTGCCGACATCATGCTTCACTCCT
TGCATGTGGAAGTGGTCATAAGACTTGCTTCCAGTGCCCTTACCATGGATGGACATATGG
ATTGGATGGCACCCTTCTGAAGGCTACAAGAATATCAGGAATTAAAAACTTCAATAAGAA
TGATTTTGGTCTCATACCAATCAAGGTGGCTACTTGGGGACCTTTTGTGTTGATCAGATT
TGATGATGAGTCCACTGAAGATAATGTTTATGACACAGTTGGAAATGAATGGTTGGGTAG
TGCTTCAGATCTGTTGGGTACAAATGGCATTGACACTTCACTGCCGCATATTTGCAGGCG
AGAATATATTATCAACTGTAACTGGAAGGTCTTCTGTGACAATTACCTAGACGGTGGATA
TCATGTTCCATACGCACATGGGGATCTTGCATCGGGTCTGCAGCTTCAATCCTATGAAAC
ACTTACATATGAAAGAGTTAGTGTTCAAAGATGTGAAAGTGCACCAGCAGAACCAGATGA
CTTCGATCGCTTAGGGACAAAAGCTCTATATGCCTTTGTTTATCCAAACTTTATGATCAA
CAGATATGGTCCATGGATGGACACTAATCTAGCTGTCCCATTAGATTCAACCAGATGCAA
GGTGGTATTTGATTATTTTCTTGACAAGTCTCTGCTGGATGACCAGTGCTTTATCAAGAA
AAGCCTCGAAGACAGTGAGCAAGTACAGATAGAAGACATTGCACTGTGTGAGGGGGTTCA
GCGTGGCCTGGAATCGCCGGCCTACAGTGTTGGAAGATACGCTCCGTCTGTGGAGATGGC
CATGCACCACTTCCACCGCCTCATGCATGCTAACCTTAGTGAGTACTGAGTAATTATTCT
CATGGACGCATCTTGCAAAGTTGTACAGAACCAAACGCTTTTTTTTTGGCAGGACACTGC
ATGAACACTGTTCTCTATTGCAATCTTGTGAATTCAGCCACATTTCAGTTACACAAAAAA
CATGTTTGCTGGTTATGAATTTTTTAGATGCATAAAATACTTTC