Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036480_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:6:89895237:89897189:1 gene:Zm00001d036480 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:eukaryotic initiation factor4a description: eukaryotic initiation factor4a
Sequence

ATGGGCCTTCAAGAGAATCTTCTGAGAGGCATTTATGCATATGGTTTTGAGAAACCATCT
GCAATTCAGCAGAGAGGAATTGTTCCCTTCTGCAAGGGGCTTGATGTCATTCAGCAAGCA
CAATCTGGTACAGGAAAGACAGCAACCTTCTGTTCTGGGATCTTGCAGCAGCTTGACTAT
GGTCTGGTTGAATGCCAGGCCCTGGTTCTTGCTCCCACCCGTGAGCTTGCACAGCAAATT
GAGAAAGTTATGCGCGCACTTGGTGACTACCTTGGTGTTAAAGTCCATGCATGCGTTGGA
GGAACATCTGTTCGTGAGGACCAAAGGATTCTCGCCAGTGGTGTGCATGTTGTTGTTGGT
ACACCTGGTCGTGTGTTTGACATGCTGCGTAGACAGTCCCTCCGCCCTGATAACATCAAG
ATGTTTGTTCTTGACGAAGCTGATGAAATGCTTTCTCGTGGTTTCAAGGATCAGATTTAT
GACATCTTCCAGCTTCTGCCATCCAAGATTCAGGTTGGAGTCTTCTCTGCTACCATGCCA
CCTGAGGCCCTTGAGATTACCCGCAAGTTCATGAACAAACCAGTGAGAATTCTTGTGAAG
AGAGATGAGCTGACCCTTGAGGGTATCAAGCAGTTCTATGTGAATGTGGACAAGGAAGAC
TGGAAGCTGGACACACTGTGTGACCTGTATGAGACCCTGGCCATTACCCAGAGTGTCATC
TTTGTCAACACCCGCCGCAAGGTGGACTGGCTCACTGACAAGATGAGGAGCAGGGACCAC
ACCGTTTCTGCCACTCATGGTGACATGGACCAGAACACTAGAGACATCATCATGAGGGAG
TTCCGGTCTGGCTCCTCCCGTGTGCTCATCACCACTGACCTGCTTGCTCGTGGTATTGAT
GTTCAGCAGGTGTCCCTGGTCATCAACTATGATCTTCCCACCCAGCCAGAGAACTACCTG
CATCGTATTGGTCGTAGTGGTCGTTTTGGTAGGAAGGGTGTTGCCATCAACTTTGTGACC
CGCGACGACGAACGTATGCTGTTTGACATTCAGAAGTTCTACAACGTGTTGATTGAGGAG
CTGCCTGCCAATGTTGCTGACCTTCTGTGA

Peptide Sequence

PEP ID

Zm00001d036480_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:6:89895237:89897189:1 gene:Zm00001d036480 transcript:Zm00001d036480_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:eukaryotic initiation factor4a description: eukaryotic initiation factor4a
Sequence

MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY
GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVG
TPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMP
PEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLDTLCDLYETLAITQSVI
FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID
VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVLIEE
LPANVADLL

Transcript Sequence

Transcript ID

Zm00001d036480_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:89895237:89897189:1 gene:Zm00001d036480 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:eukaryotic initiation factor4a description: eukaryotic initiation factor4a
Sequence

CACTATGATTCTAAAATGCAGGAGCTGCTACTGAGGAGTTCTTCACTTCATATGATGAAG
TTTTTGAAAGTTTTGATGACATGGGCCTTCAAGAGAATCTTCTGAGAGGCATTTATGCAT
ATGGTTTTGAGAAACCATCTGCAATTCAGCAGAGAGGAATTGTTCCCTTCTGCAAGGGGC
TTGATGTCATTCAGCAAGCACAATCTGGTACAGGAAAGACAGCAACCTTCTGTTCTGGGA
TCTTGCAGCAGCTTGACTATGGTCTGGTTGAATGCCAGGCCCTGGTTCTTGCTCCCACCC
GTGAGCTTGCACAGCAAATTGAGAAAGTTATGCGCGCACTTGGTGACTACCTTGGTGTTA
AAGTCCATGCATGCGTTGGAGGAACATCTGTTCGTGAGGACCAAAGGATTCTCGCCAGTG
GTGTGCATGTTGTTGTTGGTACACCTGGTCGTGTGTTTGACATGCTGCGTAGACAGTCCC
TCCGCCCTGATAACATCAAGATGTTTGTTCTTGACGAAGCTGATGAAATGCTTTCTCGTG
GTTTCAAGGATCAGATTTATGACATCTTCCAGCTTCTGCCATCCAAGATTCAGGTTGGAG
TCTTCTCTGCTACCATGCCACCTGAGGCCCTTGAGATTACCCGCAAGTTCATGAACAAAC
CAGTGAGAATTCTTGTGAAGAGAGATGAGCTGACCCTTGAGGGTATCAAGCAGTTCTATG
TGAATGTGGACAAGGAAGACTGGAAGCTGGACACACTGTGTGACCTGTATGAGACCCTGG
CCATTACCCAGAGTGTCATCTTTGTCAACACCCGCCGCAAGGTGGACTGGCTCACTGACA
AGATGAGGAGCAGGGACCACACCGTTTCTGCCACTCATGGTGACATGGACCAGAACACTA
GAGACATCATCATGAGGGAGTTCCGGTCTGGCTCCTCCCGTGTGCTCATCACCACTGACC
TGCTTGCTCGTGGTATTGATGTTCAGCAGGTGTCCCTGGTCATCAACTATGATCTTCCCA
CCCAGCCAGAGAACTACCTGCATCGTATTGGTCGTAGTGGTCGTTTTGGTAGGAAGGGTG
TTGCCATCAACTTTGTGACCCGCGACGACGAACGTATGCTGTTTGACATTCAGAAGTTCT
ACAACGTGTTGATTGAGGAGCTGCCTGCCAATGTTGCTGACCTTCTGTGAT