Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036454_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:6:89086029:89089687:1 gene:Zm00001d036454 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

ATGGCTAGCGAGGAAGTACTCCACAAGGTCCAGAATCTTATAGAGCGCTGCCTTCAGATG
TACATGAACAAGAAAGAAGTGGTTGATGCCCTCTCCCACCACTCCAGGATAGAGCCTTGT
ATCACTGAACTTGTTTGGCAACAACTTGAGCAACAGAATCCTCTGTTTTTCAAAGCATAC
GATATGAGGCTAATGCTTAAGAATCAAATAATGGTCTTCAACAGGCTTCTCCAGGATCAG
TTCGAGATTATGAATAAAGAGTTTTCTTCAGGGATCCCTTCTATGTCTCTTCCTAATGAC
TCTAATTCCAACCTATTGAAGCAAGATTCATGCTTTTTGCCAGAGACTGCTCCTGGAAAT
GCAATGCCAGATGGTATAATGCACAATGGAAGTTCAAGTGGTATAATAAATGACACACCA
TCTGGCGATCAGTTACTTAATGCTAGTAAAGACTTGCATGGCCTTCATAGTCAAATAGAT
GCTTCAACTAGTCTACAGTCAGACCAGAATGCAACTGCTGTGCTGTATGGTGTAGACAAC
GAGACAAGCGCAACAATAAAGACCGAGTCTTGCTACTCGAGTAATGCTGATTTTGCCTTC
TGTGGGAACACTTTCCTGGAATCATGCCAGTCGATAGGTGATGCATCTGGTGGTGGATCC
TTCAGCAGCTCAGAGTTGAATGGGCAACCACTAAACGATTCAATTTTGGATATGGAGTCA
TCATCATTTAGCTTCTTGAACCAAATGCCCCAAAGCTTCATGTTTTCAGACCTGGCAGAT
GATTTCAACCAAAATGCAGGTACCTTACCATGCAGGTTGAGCGGGTCATGCACAGCGTAC
CAACCATTTGTACATAGGCACATGGGCAGTCGAATCTGCATTGGTGAAGAACTTGAGGAC
CTTTTGATCTAG

Peptide Sequence

PEP ID

Zm00001d036454_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:6:89086029:89089687:1 gene:Zm00001d036454 transcript:Zm00001d036454_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

MASEEVLHKVQNLIERCLQMYMNKKEVVDALSHHSRIEPCITELVWQQLEQQNPLFFKAY
DMRLMLKNQIMVFNRLLQDQFEIMNKEFSSGIPSMSLPNDSNSNLLKQDSCFLPETAPGN
AMPDGIMHNGSSSGIINDTPSGDQLLNASKDLHGLHSQIDASTSLQSDQNATAVLYGVDN
ETSATIKTESCYSSNADFAFCGNTFLESCQSIGDASGGGSFSSSELNGQPLNDSILDMES
SSFSFLNQMPQSFMFSDLADDFNQNAGTLPCRLSGSCTAYQPFVHRHMGSRICIGEELED
LLI

Transcript Sequence

Transcript ID

Zm00001d036454_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:89086029:89089687:1 gene:Zm00001d036454 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tetratricopeptide repeat (TPR)-like superfamily protein
Sequence

GCAGGAGCTAGGGCGGGTGGAGGAGCCTTTGCCCGGGAACGAGGAGAGGAGGTGGCAGTG
GCACCCCGCGGCTAGGGCAGCGAGAGAGGGGCGAAGAGGAAGGCGGCGGGCGCGTCCGCC
ATGGCTAGCGAGGAAGTACTCCACAAGGTCCAGAATCTTATAGAGCGCTGCCTTCAGATG
TACATGAACAAGAAAGAAGTGGTTGATGCCCTCTCCCACCACTCCAGGATAGAGCCTTGT
ATCACTGAACTTGTTTGGCAACAACTTGAGCAACAGAATCCTCTGTTTTTCAAAGCATAC
GATATGAGGCTAATGCTTAAGAATCAAATAATGGTCTTCAACAGGCTTCTCCAGGATCAG
TTCGAGATTATGAATAAAGAGTTTTCTTCAGGGATCCCTTCTATGTCTCTTCCTAATGAC
TCTAATTCCAACCTATTGAAGCAAGATTCATGCTTTTTGCCAGAGACTGCTCCTGGAAAT
GCAATGCCAGATGGTATAATGCACAATGGAAGTTCAAGTGGTATAATAAATGACACACCA
TCTGGCGATCAGTTACTTAATGCTAGTAAAGACTTGCATGGCCTTCATAGTCAAATAGAT
GCTTCAACTAGTCTACAGTCAGACCAGAATGCAACTGCTGTGCTGTATGGTGTAGACAAC
GAGACAAGCGCAACAATAAAGACCGAGTCTTGCTACTCGAGTAATGCTGATTTTGCCTTC
TGTGGGAACACTTTCCTGGAATCATGCCAGTCGATAGGTGATGCATCTGGTGGTGGATCC
TTCAGCAGCTCAGAGTTGAATGGGCAACCACTAAACGATTCAATTTTGGATATGGAGTCA
TCATCATTTAGCTTCTTGAACCAAATGCCCCAAAGCTTCATGTTTTCAGACCTGGCAGAT
GATTTCAACCAAAATGCAGGTACCTTACCATGCAGGTTGAGCGGGTCATGCACAGCGTAC
CAACCATTTGTACATAGGCACATGGGCAGTCGAATCTGCATTGGTGAAGAACTTGAGGAC
CTTTTGATCTAGCTTGTTTATTTCTCTAGTTTTTGCGTCTTGATATTGTGGTAGTTTGGG
GCTTCGGGTCTGGTGGGTTGTCTAGCCCATCAGAACGCGTAATGGGTACGGAGTATTGGT
CTTCCAGTATGTTTTCAGCGTTAATTTGGCTAATTTCCCCCGCTTGGCTTGTACAACAAA
TTTTATCAGTACTGAGTACCATGAGTTGTACTGCTGTATATGCTGCTTCCCACTCTCTGA
ATTGGCAGAATGATTGATG