Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036439_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:88560354:88561488:1 gene:Zm00001d036439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arogenate dehydrogenase isoform 2

Sequence

ATGCTGTCGTCTTCCACCTCCACCCTACGCCTCCACCAACCAACCCGCCCCCACCCGCCG
GCTGCGGCCGCGGGAGGCGCCACCCACCTGACCTCCCCGCGGCGGTGGCGCGGGCACTCC
CCGGCGCCCCTCCGCGCGCTGGACGCCGCCCAGCCGTTCGACTACGAGTCCCGCGCGGCG
GGGCCGCTGGAGGAGCGGCAGCGGCTGAAGATCGCCATCGTGGGGTTCGGCAACTTCGGG
CAGTTCCTGGCGCGCACGTTCGCGCGGCAGGGGCACACGCTGCTGGCGCACTCGCGGACG
GACCACTCGGCGGCGGCGTCCGCGCTGGGCGCCGCCTTCTTCACCGACCCGCACGACCTG
TGCGAGTGCCACCCGGACGTGGTGCTGCTCGCCACCTCCATCCTGTCCGCGGAGGCCGTG
CTGCGGTCGCTGCCCCTGCACCGGCTCCGCCGCAGCACCCTCTTCGCGGACGTGCTCTCC
GTGAAGGAGTTCCCCAGGAACCTGCTCCTGAGCTCGCTGCCGCCCGGCTTCGACGTGATC
TGCACGCACCCCATGTTCGGGCCGGAGTCGGCGCGCGACGGGTGGGACGGCCTGCCGCTG
GTGTTCGAGCGGGTGCGCGTCGGGGACTGCCCCGCGCGCCGCGCCCGCGCCGACGCGTTC
CTCGGCGCCTTCGAGCGCGAGGGGTGCCGGATGGTGGAGATGTCCTGCGCCGAGCACGAC
GCGCACGCCGCCGAGACCCAGTTCCTGACGCACACCGTCGGGCGGATGCTGGCCACGCTG
GAGCTGCGCTCCACGCCCGTCGACACCAGGGGGTACGAGACGCTGATCCGCCTCGTGGAC
AACACCTGCAGCGACAGCTTCGACCTGTACAACGGCCTCTTCATGTACAACAAGAACTCC
ACCGAGCTGCTCAACCGCCTCGAGTGGGCCATGGACTCCGTCAAGAAGAGGCTCTTCGAC
GGCCTCCACGACGTGCTCCGGAAGCAGCTCTTCGAGGGCTCCCCGCACGCCCCCAACGTC
TCCTCCTCCTCCTCCAACGTGCGCAAGTAG

Peptide Sequence

PEP ID

Zm00001d036439_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:88560354:88561488:1 gene:Zm00001d036439 transcript:Zm00001d036439_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arogenate dehydrogenase isoform 2

Sequence

MLSSSTSTLRLHQPTRPHPPAAAAGGATHLTSPRRWRGHSPAPLRALDAAQPFDYESRAA
GPLEERQRLKIAIVGFGNFGQFLARTFARQGHTLLAHSRTDHSAAASALGAAFFTDPHDL
CECHPDVVLLATSILSAEAVLRSLPLHRLRRSTLFADVLSVKEFPRNLLLSSLPPGFDVI
CTHPMFGPESARDGWDGLPLVFERVRVGDCPARRARADAFLGAFEREGCRMVEMSCAEHD
AHAAETQFLTHTVGRMLATLELRSTPVDTRGYETLIRLVDNTCSDSFDLYNGLFMYNKNS
TELLNRLEWAMDSVKKRLFDGLHDVLRKQLFEGSPHAPNVSSSSSNVRK

Transcript Sequence

Transcript ID

Zm00001d036439_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:88560354:88561488:1 gene:Zm00001d036439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arogenate dehydrogenase isoform 2

Sequence

GAGGAAACGCCAGAGCAAGCGGCAGCGGCAGCGGCAGCGGCAGCCAAGAGCAGGCGGCAG
CCCAACCCCAGGTCCCCAAGCAAAGATGCTGTCGTCTTCCACCTCCACCCTACGCCTCCA
CCAACCAACCCGCCCCCACCCGCCGGCTGCGGCCGCGGGAGGCGCCACCCACCTGACCTC
CCCGCGGCGGTGGCGCGGGCACTCCCCGGCGCCCCTCCGCGCGCTGGACGCCGCCCAGCC
GTTCGACTACGAGTCCCGCGCGGCGGGGCCGCTGGAGGAGCGGCAGCGGCTGAAGATCGC
CATCGTGGGGTTCGGCAACTTCGGGCAGTTCCTGGCGCGCACGTTCGCGCGGCAGGGGCA
CACGCTGCTGGCGCACTCGCGGACGGACCACTCGGCGGCGGCGTCCGCGCTGGGCGCCGC
CTTCTTCACCGACCCGCACGACCTGTGCGAGTGCCACCCGGACGTGGTGCTGCTCGCCAC
CTCCATCCTGTCCGCGGAGGCCGTGCTGCGGTCGCTGCCCCTGCACCGGCTCCGCCGCAG
CACCCTCTTCGCGGACGTGCTCTCCGTGAAGGAGTTCCCCAGGAACCTGCTCCTGAGCTC
GCTGCCGCCCGGCTTCGACGTGATCTGCACGCACCCCATGTTCGGGCCGGAGTCGGCGCG
CGACGGGTGGGACGGCCTGCCGCTGGTGTTCGAGCGGGTGCGCGTCGGGGACTGCCCCGC
GCGCCGCGCCCGCGCCGACGCGTTCCTCGGCGCCTTCGAGCGCGAGGGGTGCCGGATGGT
GGAGATGTCCTGCGCCGAGCACGACGCGCACGCCGCCGAGACCCAGTTCCTGACGCACAC
CGTCGGGCGGATGCTGGCCACGCTGGAGCTGCGCTCCACGCCCGTCGACACCAGGGGGTA
CGAGACGCTGATCCGCCTCGTGGACAACACCTGCAGCGACAGCTTCGACCTGTACAACGG
CCTCTTCATGTACAACAAGAACTCCACCGAGCTGCTCAACCGCCTCGAGTGGGCCATGGA
CTCCGTCAAGAAGAGGCTCTTCGACGGCCTCCACGACGTGCTCCGGAAGCAGCTCTTCGA
GGGCTCCCCGCACGCCCCCAACGTCTCCTCCTCCTCCTCCAACGTGCGCAAGTAG