Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d036396_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:6:86737134:86740900:1 gene:Zm00001d036396 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 2 chloroplastic
Sequence	ATGGCAGCTGCGACGGCGCCACCGCCGGCGGCGGTTGCCACCACCCTCTCGGGCCTCATG CGCTGCCAGAACATCCGTAGCAGCAGGCCTAGAGCCTTCTACGCGAGGTGCGCCTCCTCC AACGCGAGCGCGGAGGCGGCGGAGAGCCGGAAGGGAGGCCACGGCGGGACGCGCCTGGAG GAAGCCGTGCCCGTCGGCGAGGGGCGCTCGAGGGTAGACGCCTGGATATCGGCGCGTCTC GGCGGCGGGGGCGTTAGCCGCGCGCGCGTGCAGGCCAGCATCCGGGCCGGGCTTGTCGCC GTCAATGGCCGCCCGGTCTCCAAGGTTTCGCATACTGTGAAGGGAGGGGACTTGGTCAGC TGCACGGTGTCAGAGCTACAGCCGCTGAGGGCAGAGGCGGAGGACATCCCGCTGGACATC GTTTATGAGGATGACCATGTTCTTGTTGTCAACAAGCCGGCTCATATGGTTGTTCACCCG GCGCCAGGAAATGCCAAAGGCACATTAGTCAATGCTATACTTCATCACTGCAAGATCTCC ACATTTACCTGTTTAGCACGCAGCTCAGCTGGTGATGAATGCCCGGATTCTACGGATGAA GACACTGATGTATTTCATGTGGATCAGTTTGCTGCTGAAGATGTAAGTTCAGAAGTCCGG AATGCTCTTGTGCGCCCTGGTATTGTGCACAGGCTGGATAAGGGGACAAGTGGGCTTCTT GTTGTTGCTAAGGATGAGCATTCTCATGCTCGATTAGCAGAACAGTTCAAGCTGCATACA ATCCGTAGGGTATACATCAGTCTTACTTGTGGCGCACCTAATCCAAATTCTGGCAGGATT GAGGCTTCTATTGCACGTGATCCTAACAATCGGATTCGTATGACTGCTATTGCTGGATCA GGCCACAGATATGCACGGAATGCTGCTAGTACAAAGTAA

Peptide Sequence

PEP ID	Zm00001d036396_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:6:86737134:86740900:1 gene:Zm00001d036396 transcript:Zm00001d036396_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 2 chloroplastic
Sequence	MAAATAPPPAAVATTLSGLMRCQNIRSSRPRAFYARCASSNASAEAAESRKGGHGGTRLE EAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVS CTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNAKGTLVNAILHHCKIS TFTCLARSSAGDECPDSTDEDTDVFHVDQFAAEDVSSEVRNALVRPGIVHRLDKGTSGLL VVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRIRMTAIAGS GHRYARNAASTK

Transcript Sequence

Transcript ID	Zm00001d036396_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:86737134:86740900:1 gene:Zm00001d036396 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 2 chloroplastic
Sequence	ATGGCAGCTGCGACGGCGCCACCGCCGGCGGCGGTTGCCACCACCCTCTCGGGCCTCATG CGCTGCCAGAACATCCGTAGCAGCAGGCCTAGAGCCTTCTACGCGAGGTGCGCCTCCTCC AACGCGAGCGCGGAGGCGGCGGAGAGCCGGAAGGGAGGCCACGGCGGGACGCGCCTGGAG GAAGCCGTGCCCGTCGGCGAGGGGCGCTCGAGGGTAGACGCCTGGATATCGGCGCGTCTC GGCGGCGGGGGCGTTAGCCGCGCGCGCGTGCAGGCCAGCATCCGGGCCGGGCTTGTCGCC GTCAATGGCCGCCCGGTCTCCAAGGTTTCGCATACTGTGAAGGGAGGGGACTTGGTCAGC TGCACGGTGTCAGAGCTACAGCCGCTGAGGGCAGAGGCGGAGGACATCCCGCTGGACATC GTTTATGAGGATGACCATGTTCTTGTTGTCAACAAGCCGGCTCATATGGTTGTTCACCCG GCGCCAGGAAATGCCAAAGGCACATTAGTCAATGCTATACTTCATCACTGCAAGATCTCC ACATTTACCTGTTTAGCACGCAGCTCAGCTGGTGATGAATGCCCGGATTCTACGGATGAA GACACTGATGTATTTCATGTGGATCAGTTTGCTGCTGAAGATGTAAGTTCAGAAGTCCGG AATGCTCTTGTGCGCCCTGGTATTGTGCACAGGCTGGATAAGGGGACAAGTGGGCTTCTT GTTGTTGCTAAGGATGAGCATTCTCATGCTCGATTAGCAGAACAGTTCAAGCTGCATACA ATCCGTAGGGTATACATCAGTCTTACTTGTGGCGCACCTAATCCAAATTCTGGCAGGATT GAGGCTTCTATTGCACGTGATCCTAACAATCGGATTCGTATGACTGCTATTGCTGGATCA GGCCACAGATATGCACGGAATGCTGCTAGTACAAAGTAAGAGAGGTCTTTGCTGGTGGCG GATCCGCACTAGTTGAGTGGAGACTAGAGACAGGACGCACTCATCAGATCCGGGCGCATG CAAAGTACATAGGGATCCCTCTTCTCGGCGACGAAACATATGGAGGTACCCAGAGCATGG CGTTATCGCTCCTGAGACCAAGGAGTCCTTCGAAATATCACAGCGGCCTTTCGAATCTGT TGTCTAAAGTGGACAGGCCTTGCCTTCATGCTGCATCGCTTGGGTAGGTATCATACAACA CAGGTATTTACTATTATAGTACTTCTTTTATCAGGCTTCTCTCTTCTAGTACTTATAATT TTATCTACTCTATAATAGTAATCATAAGTGAATCTATCCTATAAAATGGTACTCTAATCC ATTTTAAATTCTTTTCATTTTATTTTCTTATTTTTCACTACAGAATTACCATACTGCTCT ATCAGTTCTAGCAGGAATTAAATAAACTCACGAATAACTGCAAATTACTAATATCGGTGT GTTGCTTGTTTGGATGTTATTGGCCGGTTGAGACCTGCGAATCACGATTCTCACGAGCAA CTGTTTAAACTTTCTTGTCAAGATAGATAGTGTTCTTGTATATGTTTATTTTATTTGGCA TGCAGATGGAAAACGAACAACAAACAAGAGGATCGCTGGGACCTAGTCAGGCGGTTCATG TGAATGATAGCTATTGTGATATATATAACATAACCAGTCAGTTTGCCAGCAATAAACATG TATTTAGATATTACACTTGTTGTCTTGTTGATGCATCTGAGACTACACCTGCAATAGCTA GCTGAAGTTATGCATTCGTGATGAACAGAGGTGCGAAGGGAGAGATGAAAAGAAGTGAGT CAGGTTAATTGAAGTGGTGATAAATACTAAAAGAAAATAAAAATGATTAAAAAGTGGTTG GAGTATTATTTTAAAGGATATGTTCACTTATGAATACTATCACGGAGAAATTAAAATTGT AAGTACTAAAAGAGAGAAGCCTAATAAAATGAATATCATAATAGCAAAAAGCTCGAAACA TGTATGATGTATCTTGTGTTTTTTGAAAGTTCAGGATGTGATTACCGTCTTCTGATCTTC TCCCCCCAGATTCAAGCACCCACGTTCAGGAAAGGTCCTTGAGTTCTCGTGCCCCCCGCC AGATGATTTCTTGGAGGTGCTTGGTGAATTGCGACGTGTTACGTCTAGGTCCAGTGATGC CCCAAATGGTGATGGTGTTTTCCGGTGAGGGAGATGGATAGAACCAAGGCTGAGGATGTG GAACAAGACATGGGAACCCTTGGAGATTTGTTCCAGGCTCCTAGAAAGAGAAAAGTGTTT CGTACGAGTTTTCCTGATGGCTGGTGGAAGTGAGAGGGAAATGAGTAGGAGAATCTGTAT GCTTTCGGCTGGGCTCATCAGTACACACGCATTTGTTTTGGGCTCCGATTCATGGGCTTC CAGCAGGAAGAACTTCACGGGATTCGAT