Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d036395_T016
CDS Infomation	cds chromosome:B73_RefGen_v4:6:86726861:86732776:1 gene:Zm00001d036395 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 48
Sequence	ATGCTAGTGAAATTGATGAACTTGTTACGGGCGTGCTGGCGACCGTCATCGAACCGGCAT GCCCGAACAGGCTCAGATGTTACCGGTAGGCAGGATGGACTTCTATGGTACAAGGACGCC GGGCAACATGTCAATGGGGAGTTCTCCATGGCTGTTGTTCAGGCAAATAACTTACTTGAG GACCAGTGTCAGATCGAGTCGGGCCCACTGAGTTTTCTAGATTCTGGACCATATGGCACT TTCGTTGGTGTTTACGATGGGCATGGTGGTCCAGAGACGGCCTGCTATATCAATGATCAT CTTTTCCAGAATCTGAAAATAGCACTATTCCCGTTTCTTAGCACTATATCTGCATTTGGC TTTCAGTTTGCACATAAAGGAGATCATCCATTTTTTCATGGCTTGTATTTAGGATTTGCA TCTGAGCAGAATGCAATGTCTGCTGATGTACTGAAGAAGGCATATGAAGCTACAGAAGAT GGATTCTTCTCCATTGTTACCAAACAATGGCCTGTAAAGCCTCAGATAGCAGCTGTCGGC TCATGCTGCCTGGTCGGTGTAATTTGTGGTGGCATGCTTTATGTTGCCAATGTTGGGGAT TCCCGTGTCGTTTTAGGAAAACATGTTAAGGCCACTGGAGAAGTTTTGGCTGTCCAACTG TCAGCAGAACATAATGTTAGTATTGCGTCCGTGAGAAAAGAACTGCAGTCAATGCACCCA GAAGATAGGCACATTGTTGTTCTCAAGCACAATGTTTGGCGTGTTAAAGGACTAATTCAG GTTTGTAGATCAATTGGTGATGCATATCTCAAAAAGCAAGAGTTCAACAGGGAACCCCTA TATGCAAAATTTCGCCTCCGTGAACCTTTTCACAAGCCAATACTAAGTTCAGAACCATCA ATCAGTGTGCAACCACTACAACCACACGACCAGTTTCTCATATTTGCATCTGATGGACTT TGGGAGCAGTTAACCAACCAAGAGGCAGTTGATATTGTTCGAAGTAGCCCCCGCAGTCGT CCAGTGCAGCAGGTTGCGGCTGTGGCGCGGCTGCAGGCAGCGACTTGTCGCCTTCAGGCC GCGACACGTGGCTTCCTGGCGCGACATCAAGCACGGCAAGCGGCAACGCGGCTGCAAGCC GTGGGCTGTCGTTCTCTGGCTCATCGACTTGCATCGATATTGTGCGTTGAACAACACGCA TCACTTGGGGCGGCAAGGCCTTCAGTAGGGTTGGCCGATCCTCCACTGCAGTTTACCGTC CTGATCCATGGCCATGTGGATGACAAGAACACGTCTAGTTGGGTGGCGCTGTCTCCACTG GAACTCGCGGTAGCTCAGGTCGTACAATTGGGCTGTGCTAGGAGGCTGATAAGAGCGGCA CTGCAAGAGGCAGCCAAGAAAAGAGAGATGAGGTACTCGGACCTCAAGAAGATTGACCGC GGTGTTCGCCGCCACTTCCACGACGACATAACAGTCATAGTAGTGTTCCTTGACTCCGGC CTCGTAAGCCAGGCGAGCACACACCGAGGTCCAACTCTTTCCTTGCGAGGCGGTGGCGGC AGCGCTGGCCTGCGCAGCAACACACTTGCACCTACGTGA

Peptide Sequence

PEP ID	Zm00001d036395_P016
PEP Infomation	pep chromosome:B73_RefGen_v4:6:86726861:86732776:1 gene:Zm00001d036395 transcript:Zm00001d036395_T016 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 48
Sequence	MLVKLMNLLRACWRPSSNRHARTGSDVTGRQDGLLWYKDAGQHVNGEFSMAVVQANNLLE DQCQIESGPLSFLDSGPYGTFVGVYDGHGGPETACYINDHLFQNLKIALFPFLSTISAFG FQFAHKGDHPFFHGLYLGFASEQNAMSADVLKKAYEATEDGFFSIVTKQWPVKPQIAAVG SCCLVGVICGGMLYVANVGDSRVVLGKHVKATGEVLAVQLSAEHNVSIASVRKELQSMHP EDRHIVVLKHNVWRVKGLIQVCRSIGDAYLKKQEFNREPLYAKFRLREPFHKPILSSEPS ISVQPLQPHDQFLIFASDGLWEQLTNQEAVDIVRSSPRSRPVQQVAAVARLQAATCRLQA ATRGFLARHQARQAATRLQAVGCRSLAHRLASILCVEQHASLGAARPSVGLADPPLQFTV LIHGHVDDKNTSSWVALSPLELAVAQVVQLGCARRLIRAALQEAAKKREMRYSDLKKIDR GVRRHFHDDITVIVVFLDSGLVSQASTHRGPTLSLRGGGGSAGLRSNTLAPT

Transcript Sequence

Transcript ID	Zm00001d036395_T016
Transcript Infomation	cdna chromosome:B73_RefGen_v4:6:86726861:86732776:1 gene:Zm00001d036395 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 48
Sequence	TTTTCCCCCCATCCCTCCCGCTCCCCCTTCTTGGAGCCGCGTACCCCAGCCCCCAGGATT GGTGACAGGCACCCTCCCTCCTGATCTCAATCAGTTCTCGGCGCTTGAGTGCCGTGGACA GATAGAAGAAAATTATTGGCGCTCTGACAAATCCAACTGAGGTTTTCTTGGACTACAGAT GAAGCGGGCTCGAAGGGCGTATGTGCAAGAGATGACTGATGAGGGATGCTAGTGAAATTG ATGAACTTGTTACGGGCGTGCTGGCGACCGTCATCGAACCGGCATGCCCGAACAGGCTCA GATGTTACCGGTAGGCAGGATGGACTTCTATGGTACAAGGACGCCGGGCAACATGTCAAT GGGGAGTTCTCCATGGCTGTTGTTCAGGCAAATAACTTACTTGAGGACCAGTGTCAGATC GAGTCGGGCCCACTGAGTTTTCTAGATTCTGGACCATATGGCACTTTCGTTGGTGTTTAC GATGGGCATGGTGGTCCAGAGACGGCCTGCTATATCAATGATCATCTTTTCCAGAATCTG AAAATAGCACTATTCCCGTTTCTTAGCACTATATCTGCATTTGGCTTTCAGTTTGCACAT AAAGGAGATCATCCATTTTTTCATGGCTTGTATTTAGGATTTGCATCTGAGCAGAATGCA ATGTCTGCTGATGTACTGAAGAAGGCATATGAAGCTACAGAAGATGGATTCTTCTCCATT GTTACCAAACAATGGCCTGTAAAGCCTCAGATAGCAGCTGTCGGCTCATGCTGCCTGGTC GGTGTAATTTGTGGTGGCATGCTTTATGTTGCCAATGTTGGGGATTCCCGTGTCGTTTTA GGAAAACATGTTAAGGCCACTGGAGAAGTTTTGGCTGTCCAACTGTCAGCAGAACATAAT GTTAGTATTGCGTCCGTGAGAAAAGAACTGCAGTCAATGCACCCAGAAGATAGGCACATT GTTGTTCTCAAGCACAATGTTTGGCGTGTTAAAGGACTAATTCAGGTTTGTAGATCAATT GGTGATGCATATCTCAAAAAGCAAGAGTTCAACAGGGAACCCCTATATGCAAAATTTCGC CTCCGTGAACCTTTTCACAAGCCAATACTAAGTTCAGAACCATCAATCAGTGTGCAACCA CTACAACCACACGACCAGTTTCTCATATTTGCATCTGATGGACTTTGGGAGCAGTTAACC AACCAAGAGGCAGTTGATATTGTTCGAAGTAGCCCCCGCAGTCGTCCAGTGCAGCAGGTT GCGGCTGTGGCGCGGCTGCAGGCAGCGACTTGTCGCCTTCAGGCCGCGACACGTGGCTTC CTGGCGCGACATCAAGCACGGCAAGCGGCAACGCGGCTGCAAGCCGTGGGCTGTCGTTCT CTGGCTCATCGACTTGCATCGATATTGTGCGTTGAACAACACGCATCACTTGGGGCGGCA AGGCCTTCAGTAGGGTTGGCCGATCCTCCACTGCAGTTTACCGTCCTGATCCATGGCCAT GTGGATGACAAGAACACGTCTAGTTGGGTGGCGCTGTCTCCACTGGAACTCGCGGTAGCT CAGGTCGTACAATTGGGCTGTGCTAGGAGGCTGATAAGAGCGGCACTGCAAGAGGCAGCC AAGAAAAGAGAGATGAGGTACTCGGACCTCAAGAAGATTGACCGCGGTGTTCGCCGCCAC TTCCACGACGACATAACAGTCATAGTAGTGTTCCTTGACTCCGGCCTCGTAAGCCAGGCG AGCACACACCGAGGTCCAACTCTTTCCTTGCGAGGCGGTGGCGGCAGCGCTGGCCTGCGC AGCAACACACTTGCACCTACGTGACTATAAAGTGCCTGGTGGAGTGGAGGCTACTGACTG AAGGTGGTTTTCTTTCCTTGTGTCGAATGTGTTATATATGTACTTGTACCAGCCAAGATC ATTCATCCCCCCCCCTAAAATGGTGTAAAGAAGTAGGAGAGGCGCCGAAGTTCCTCACCA GCGTATCTGAATGCCCTCAATGGTGTCAAGTTGTGGACTCAAGTGGATAGCTTCGCTGAA TCTTCTGATGATGCTCTGTGGAAAGCTCGAATCCTTTCCACCTGAAAAAGCAAGTAATAT GTCTTCCAGTGCTGGAATTAACCCCTAGTGCATATATATATGTATGAAATAATAATAAGG CAAAAGGAGGAGTAACTTATTTAACTAATGCTGTGAGGTGTATTTATGTTTTGTATGTGT ACTGCTTTTGACTGCTACTGCATCTACTGTTGTTAATTGACCACTGGTGAAGTGAAATCA CTGGTTTCGTCTTGCTGTC