Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036388_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:6:86354781:86356906:-1 gene:Zm00001d036388 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATGCGGCGTGGACCTCCGCGGTGAATCGGGCCACCGGCATGGCCGACTCCGCCAAG
CGCTTCCTCCTCCCCTTCCGCCGCCCGCCGCCGCCGCCGCCGCCATGTCCGGACCCCGAC
CCTAACCCCGTACAGATCTTGAAACGTTTGCAGCGACAAGCGTTTTACGACATTATGCAG
CTGAGGGAGAGGCAAGAGAAAGTTGAAAGAGTGATCTCGTTGTTCAAAGCTACCAAAGTT
GGTCCGTTCGCAGAAGAAAGCACTCGGGTCAAGGGCGTTGTCAATGTCGCTGGCTCGCTC
CCAAGAGACATCTCAGAAGCAGAATCTTGTATCAGTTCACGGTTTGTGTTTGAGGCTCCT
GTCAGGAAGAAGGATTCCCTGTTTGCCGAGCTCAGCACCGAACATAGATACGTGTCTCAG
GAAAACGATCACATCGAGACCCCTTTTGTGTTGTCAAAGTTGATGTACCTGTCGAACATC
AGTGACTCGTTTTCGGTTGCTGTTGTACCGAAAGGAGCTAGGTGTAAAGATTTTTCAACG
GACCAAAATATCCGAGAGGAACATTGGCTGGCCAGTTTGCGATCTTCGCTGAGGCCACCT
TTGCTGAGTAAAAGCCACAGATATGCTGGCGGCCTAATACTGAGATCGAAGAACTTCGCT
GTTTCTATAGCGCAGCTGATCTCAGTTGCCGCGAGGCCAGTAAACGGCGGTGAAGCCAGC
AGAGTCTGTACAGAGTTTGGGCAAATCTCGTACCAGTTCCCTGATGACATAAAGTTGACC
CTGTCTGCTGCTTTGCATGGACCCAGTGTAGTTCCTCGGAAGAGGAAACCAACTGCTGGA
GGTTGCGTTGGTCTTGAGCTGGAAATTGATGAGGACTCCAGAATCGGGGCCTGGATCGAG
TTGAACAAGAAGTCAAGCTCACGTTTGCTGAGATGGGCCCTCACACTGTCAGATACGCCG
GAAGGTGACCTTGGATGGGGCGTGAGCTTGCGTAGAGGCACTGAGGAAAAACCGCAACTG
TTTCAGGTGGAGGGATTTCTGAACTTGCATCTGGGGAAGGCTGCTGCCGTGCAGCCTGGC
ATCGTGTTCAACGTGGATGGCCGGAGGTGCAGACCTGGTCTCGTATTCCACTCGAGTTGG
TCCTTGTGA

Peptide Sequence

PEP ID

Zm00001d036388_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:6:86354781:86356906:-1 gene:Zm00001d036388 transcript:Zm00001d036388_T002 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDAAWTSAVNRATGMADSAKRFLLPFRRPPPPPPPCPDPDPNPVQILKRLQRQAFYDIMQ
LRERQEKVERVISLFKATKVGPFAEESTRVKGVVNVAGSLPRDISEAESCISSRFVFEAP
VRKKDSLFAELSTEHRYVSQENDHIETPFVLSKLMYLSNISDSFSVAVVPKGARCKDFST
DQNIREEHWLASLRSSLRPPLLSKSHRYAGGLILRSKNFAVSIAQLISVAARPVNGGEAS
RVCTEFGQISYQFPDDIKLTLSAALHGPSVVPRKRKPTAGGCVGLELEIDEDSRIGAWIE
LNKKSSSRLLRWALTLSDTPEGDLGWGVSLRRGTEEKPQLFQVEGFLNLHLGKAAAVQPG
IVFNVDGRRCRPGLVFHSSWSL

Transcript Sequence

Transcript ID

Zm00001d036388_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:86354781:86356906:-1 gene:Zm00001d036388 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCCAGTCGACCTCGAAGCATCCATCCATCCAGTGGAGTCGAGCCTCTCGCACGCTCTCCT
CCAGTGTCGCGGAGGGAAGCGTGGCCGACGGGGAAGAAGAGGATGGATGCGGCGTGGACC
TCCGCGGTGAATCGGGCCACCGGCATGGCCGACTCCGCCAAGCGCTTCCTCCTCCCCTTC
CGCCGCCCGCCGCCGCCGCCGCCGCCATGTCCGGACCCCGACCCTAACCCCGTACAGATC
TTGAAACGTTTGCAGCGACAAGCGTTTTACGACATTATGCAGCTGAGGGAGAGGCAAGAG
AAAGTTGAAAGAGTGATCTCGTTGTTCAAAGCTACCAAAGTTGGTCCGTTCGCAGAAGAA
AGCACTCGGGTCAAGGGCGTTGTCAATGTCGCTGGCTCGCTCCCAAGAGACATCTCAGAA
GCAGAATCTTGTATCAGTTCACGGTTTGTGTTTGAGGCTCCTGTCAGGAAGAAGGATTCC
CTGTTTGCCGAGCTCAGCACCGAACATAGATACGTGTCTCAGGAAAACGATCACATCGAG
ACCCCTTTTGTGTTGTCAAAGTTGATGTACCTGTCGAACATCAGTGACTCGTTTTCGGTT
GCTGTTGTACCGAAAGGAGCTAGGTGTAAAGATTTTTCAACGGACCAAAATATCCGAGAG
GAACATTGGCTGGCCAGTTTGCGATCTTCGCTGAGGCCACCTTTGCTGAGTAAAAGCCAC
AGATATGCTGGCGGCCTAATACTGAGATCGAAGAACTTCGCTGTTTCTATAGCGCAGCTG
ATCTCAGTTGCCGCGAGGCCAGTAAACGGCGGTGAAGCCAGCAGAGTCTGTACAGAGTTT
GGGCAAATCTCGTACCAGTTCCCTGATGACATAAAGTTGACCCTGTCTGCTGCTTTGCAT
GGACCCAGTGTAGTTCCTCGGAAGAGGAAACCAACTGCTGGAGGTTGCGTTGGTCTTGAG
CTGGAAATTGATGAGGACTCCAGAATCGGGGCCTGGATCGAGTTGAACAAGAAGTCAAGC
TCACGTTTGCTGAGATGGGCCCTCACACTGTCAGATACGCCGGAAGGTGACCTTGGATGG
GGCGTGAGCTTGCGTAGAGGCACTGAGGAAAAACCGCAACTGTTTCAGGTGGAGGGATTT
CTGAACTTGCATCTGGGGAAGGCTGCTGCCGTGCAGCCTGGCATCGTGTTCAACGTGGAT
GGCCGGAGGTGCAGACCTGGTCTCGTATTCCACTCGAGTTGGTCCTTGTGATTCTGGTGT
AGGAACTTTTGGTAGATCACAGAATGCTGATGAGATTGTATCAGCTGAAAGAGGCAAATG
ATTCATTTGAAAGTGCATGATGCTTTGGTGCTGATTATTTCCAGTTG