Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036340_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:84776706:84778799:1 gene:Zm00001d036340 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystem II1 description: photosystem II1
Sequence

ATGGCCACCAGCTCCACCGCCTTGCTGCACCTTGTCATACCGGCCTCCCGCCGCCGCCGG
CACTTGGTGCCTCGGGCCGCACACTCCGAGTCCGCCCCGCCCGCCGCCTCCGTCGACCGC
CGCCGCTTCATCGCCCACACCGCCGCCGCGGCCGCCGTCTCCCCTCTCGTCTTGCCCCGC
TGGACCCCCGCGGCTCGCGCGGACGAAGCGCCGGCGCTCTCCGAGTGGGAGCGCATCTTC
CTGCCCATCGACTCCGGCGTCGTCCTCCTCGACATCGCCTTCGTCCCAGACGACCCCTCC
CATGGTTTTCTCCTTGGAACAAGACAGACAATACTGGAGACGAAAGACGGCGGCAACACC
TGGTTCCCTCGCTCCATCCCTTCCGCAGAGGACGAAGATTTCAACTACAGGTTCAACTCG
GTAAGCTTCAAGGGCAGAGAGGGATGGATTATCGGCAAGCCTGCAATTCTACTGCACACC
TCAGATGCTGGCGAGAGCTGGGAAAGAATACCCCTGAGTGCCCAACTTCCTGGGAACATG
GTTTACATAAAAGCTACTGGGGAGCAGAGCGCAGAGATGGTTACCGATGAGGGAGCAATC
TATGTTACCTCTAACCGTGGATACAACTGGAAGGCTGCCGTGCAGGAGACCGTTTCAGCT
ACTCTGAACAGAACAGTTTCAAGTGGCATTAGCGGTGCAAGCTACTACACTGGGACTTTC
AACACGGTGAACAGATCGGCCGACGGGCGCTACGTGGCTGTGTCCAGCCGAGGGAACTTC
TATCTGACGTGGGAGCCCGGGCAGCCGTTCTGGCAACCCCACAACAGGGCGGTGGCACGG
AGGATTCAGAACATGGGGTGGAGAGCGGACGGTGGACTTTGGCTGCTGGTGCGCGGTGGT
GGCCTCTTCCTCAGCAGAGGAACCGGGATAACTGAAGATTTTGAGGAGGTGCAGGTGCAG
AGCCGGGGGTTTGGGATCCTGGACGTGGGCTACCGCTCGCAGGAGGAGGCCTGGGCTGCT
GGTGGCAGCGGCGTGCTGCTCAAGACCACAAACGGAGGGAAGAGCTGGATGCGCGACAAG
GCTGCCGACAACATCGCCGCCAATCTCTACTCCGTCAAGTTCCTTGATGACAGGAAAGGC
TTCGTGCTGGGCAACGACGGCGTGTTGCTTCGGTATCTTGGCTGA

Peptide Sequence

PEP ID

Zm00001d036340_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:84776706:84778799:1 gene:Zm00001d036340 transcript:Zm00001d036340_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystem II1 description: photosystem II1
Sequence

MATSSTALLHLVIPASRRRRHLVPRAAHSESAPPAASVDRRRFIAHTAAAAAVSPLVLPR
WTPAARADEAPALSEWERIFLPIDSGVVLLDIAFVPDDPSHGFLLGTRQTILETKDGGNT
WFPRSIPSAEDEDFNYRFNSVSFKGREGWIIGKPAILLHTSDAGESWERIPLSAQLPGNM
VYIKATGEQSAEMVTDEGAIYVTSNRGYNWKAAVQETVSATLNRTVSSGISGASYYTGTF
NTVNRSADGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGG
GLFLSRGTGITEDFEEVQVQSRGFGILDVGYRSQEEAWAAGGSGVLLKTTNGGKSWMRDK
AADNIAANLYSVKFLDDRKGFVLGNDGVLLRYLG

Transcript Sequence

Transcript ID

Zm00001d036340_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:84776706:84778799:1 gene:Zm00001d036340 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:photosystem II1 description: photosystem II1
Sequence

CGGATCCGGCGGGCCCTGCAACGGCGCGGCAGCAGGATAAGAGGACGCGGCGCGCGCATC
CACAAGCAGCGGAGGAGCCCGACCACGCCAGTGAGCCCGCCCGATTCGCCGTCGCGGCGG
CCACGTTTCCCCTCCAATGGCCACCAGCTCCACCGCCTTGCTGCACCTTGTCATACCGGC
CTCCCGCCGCCGCCGGCACTTGGTGCCTCGGGCCGCACACTCCGAGTCCGCCCCGCCCGC
CGCCTCCGTCGACCGCCGCCGCTTCATCGCCCACACCGCCGCCGCGGCCGCCGTCTCCCC
TCTCGTCTTGCCCCGCTGGACCCCCGCGGCTCGCGCGGACGAAGCGCCGGCGCTCTCCGA
GTGGGAGCGCATCTTCCTGCCCATCGACTCCGGCGTCGTCCTCCTCGACATCGCCTTCGT
CCCAGACGACCCCTCCCATGGTTTTCTCCTTGGAACAAGACAGACAATACTGGAGACGAA
AGACGGCGGCAACACCTGGTTCCCTCGCTCCATCCCTTCCGCAGAGGACGAAGATTTCAA
CTACAGGTTCAACTCGGTAAGCTTCAAGGGCAGAGAGGGATGGATTATCGGCAAGCCTGC
AATTCTACTGCACACCTCAGATGCTGGCGAGAGCTGGGAAAGAATACCCCTGAGTGCCCA
ACTTCCTGGGAACATGGTTTACATAAAAGCTACTGGGGAGCAGAGCGCAGAGATGGTTAC
CGATGAGGGAGCAATCTATGTTACCTCTAACCGTGGATACAACTGGAAGGCTGCCGTGCA
GGAGACCGTTTCAGCTACTCTGAACAGAACAGTTTCAAGTGGCATTAGCGGTGCAAGCTA
CTACACTGGGACTTTCAACACGGTGAACAGATCGGCCGACGGGCGCTACGTGGCTGTGTC
CAGCCGAGGGAACTTCTATCTGACGTGGGAGCCCGGGCAGCCGTTCTGGCAACCCCACAA
CAGGGCGGTGGCACGGAGGATTCAGAACATGGGGTGGAGAGCGGACGGTGGACTTTGGCT
GCTGGTGCGCGGTGGTGGCCTCTTCCTCAGCAGAGGAACCGGGATAACTGAAGATTTTGA
GGAGGTGCAGGTGCAGAGCCGGGGGTTTGGGATCCTGGACGTGGGCTACCGCTCGCAGGA
GGAGGCCTGGGCTGCTGGTGGCAGCGGCGTGCTGCTCAAGACCACAAACGGAGGGAAGAG
CTGGATGCGCGACAAGGCTGCCGACAACATCGCCGCCAATCTCTACTCCGTCAAGTTCCT
TGATGACAGGAAAGGCTTCGTGCTGGGCAACGACGGCGTGTTGCTTCGGTATCTTGGCTG
ACATTCTATGTATATGTGTGTACAGCGAACGGCATGTGCTGCTGCTACTACTACTGTAAA
AGGCTGCTTACTGTGCTTGCGTTCTCTCTTCTGCAACCCAAATTGAGTGTAAAGATGCAT
GTGCTGCTTGCTAGGAACTTGAAAACCTTGTATACCCGTATCTACTATCTATATATATGC
TACCTTGTTGCAAACAACCCTCAAACCATTGAGAAGCTCTCCATTCTCAATGCCTGGGAC
AAATCATTCTACTCAATCTATTTGCATTTTTCTACGAAGACCCATATTAACAAAGGCCAT
CTTTCAGAGCCAATAAAATTCCCTGCAT