Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036280_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:6:81598926:81601795:1 gene:Zm00001d036280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCACAATGAATGTGGAAGTATAATAATCATCACAACTCGTAATATTGATGTTGCAAAA
CAAGCTGGAAGTGTTTATCAAATGGAACCTCTTTCTCTCAGCGACTCAACAAAGTTATTC
TGCCAAATAATTTTTGGCAGTGAAGACAAATGTCCTCCAGCTAATTTAGCTGAAGTGGCT
GGTAAAATCTTACAGAAATGTGGTGGTGTACCATTAGCTATCATTACCATGGCAAGTATG
CTAGCCAATAAAACTGGAAAGGAAATAAACACACATAGCTATTGGTCACATGTGTACCAA
TCCATGGGTTATGGTCTAGATGGCAGTACTAATGTGAAGAATATGAGAAGGATACTATCA
GTTAGTTACTATGACCTACCTTCACATCTAAAGACTTGCTTGTTATACCTAAGTTTGTAT
CCAGAGGACTACAGGATTAGAACAAGAGGTCTGATATGGAAATGGATTGGTGAAGGTTTT
GTCCATGAAGAACAAGGGAAGAGCCTATATGAAGTAGGTAAGGATTATATTGAAGAGTTA
GTTAACACAAGTATGTTAGAACCTGTCGGGATTGGCCATGATGGTAAGACCGTATCTTGT
CGGATACATGATATGGTCCTTGATCTTATCAGTTTCTTGTCAAATGAGGAGCATTTTCTA
ACAAAAGTAGGTGGGCAACAACCCGTATCTCTTGATCTGCCTAAAAAGGTCCGCCGGTTA
TCCCTCCAAATTAGCCAGGAAGAGGAAGCCAAGCAGCTAGCTACAATGAGCTTCTCCCAC
GTAAGGTCACTTACTGTGTCCACTGAAGTTTTCCAGTTGACGCCAAAACTTTCGGCCTTT
CTGGTCTTACGTGTATTGAATTTAAAGAAATGTAATGGAGTGAACAATCACCACTTTAAA
GATATTTGCAATATGTTTCAGCTGAGATATTTGAGTCTCAATGCGAAATTTATTACTGAG
ATCCCAAGGGAGATTCGGAATCTGCAATTTTTGCAAGTACTTGACATAACTAATCTTGGG
CACAAAGTAAAGATGACAACCATTATTCACTTGCGACAGCTGTTGCGGCTTTGTTCTAGG
TCTGGGTGGAGCATAAAACAGCTAGACGGATTTGGAAAACTAACCTCTCTACAAGAAGTT
AAAGGGACCATAACTATCGAGTCACCAAGCATGCTGCATGATCTGGGGTGTCTGACCAAT
CTCAGGACCTTGGGCATCAACTTTCGTGATTGGGATGAGAGCTATGAGGAACCTTTCATC
CAATGTCTATCTAACCTTGTCAGCCTCAAATCCATGAAAATAAAAGGTACCATGATGAGC
AGCCTATGTTCCGAATGTGACAAATTGTACCCTGGTCCTCAACAACTTTGCTCCATTGAT
ATGAAGTCACTTAGTACCAAGATGGATGTCATCACTCTGCTCCCTGTCTAG

Peptide Sequence

PEP ID

Zm00001d036280_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:6:81598926:81601795:1 gene:Zm00001d036280 transcript:Zm00001d036280_T009 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MHNECGSIIIITTRNIDVAKQAGSVYQMEPLSLSDSTKLFCQIIFGSEDKCPPANLAEVA
GKILQKCGGVPLAIITMASMLANKTGKEINTHSYWSHVYQSMGYGLDGSTNVKNMRRILS
VSYYDLPSHLKTCLLYLSLYPEDYRIRTRGLIWKWIGEGFVHEEQGKSLYEVGKDYIEEL
VNTSMLEPVGIGHDGKTVSCRIHDMVLDLISFLSNEEHFLTKVGGQQPVSLDLPKKVRRL
SLQISQEEEAKQLATMSFSHVRSLTVSTEVFQLTPKLSAFLVLRVLNLKKCNGVNNHHFK
DICNMFQLRYLSLNAKFITEIPREIRNLQFLQVLDITNLGHKVKMTTIIHLRQLLRLCSR
SGWSIKQLDGFGKLTSLQEVKGTITIESPSMLHDLGCLTNLRTLGINFRDWDESYEEPFI
QCLSNLVSLKSMKIKGTMMSSLCSECDKLYPGPQQLCSIDMKSLSTKMDVITLLPV

Transcript Sequence

Transcript ID

Zm00001d036280_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:81598926:81601795:1 gene:Zm00001d036280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCTCTACCAGCTTGATGGAGACAAATACAGGGACATCAATCAAGGAACATGGAGTGAAGA
ACAACTAATCTGGGAACTGAGGAAGTTCCTTCTACACAAGAGGTACTTTATTGTCATTGA
TGACATATGGAATACTTCTGTGTGGGAAACAATCCAATGTTCTTTGATGCACAATGAATG
TGGAAGTATAATAATCATCACAACTCGTAATATTGATGTTGCAAAACAAGCTGGAAGTGT
TTATCAAATGGAACCTCTTTCTCTCAGCGACTCAACAAAGTTATTCTGCCAAATAATTTT
TGGCAGTGAAGACAAATGTCCTCCAGCTAATTTAGCTGAAGTGGCTGGTAAAATCTTACA
GAAATGTGGTGGTGTACCATTAGCTATCATTACCATGGCAAGTATGCTAGCCAATAAAAC
TGGAAAGGAAATAAACACACATAGCTATTGGTCACATGTGTACCAATCCATGGGTTATGG
TCTAGATGGCAGTACTAATGTGAAGAATATGAGAAGGATACTATCAGTTAGTTACTATGA
CCTACCTTCACATCTAAAGACTTGCTTGTTATACCTAAGTTTGTATCCAGAGGACTACAG
GATTAGAACAAGAGGTCTGATATGGAAATGGATTGGTGAAGGTTTTGTCCATGAAGAACA
AGGGAAGAGCCTATATGAAGTAGGTAAGGATTATATTGAAGAGTTAGTTAACACAAGTAT
GTTAGAACCTGTCGGGATTGGCCATGATGGTAAGACCGTATCTTGTCGGATACATGATAT
GGTCCTTGATCTTATCAGTTTCTTGTCAAATGAGGAGCATTTTCTAACAAAAGTAGGTGG
GCAACAACCCGTATCTCTTGATCTGCCTAAAAAGGTCCGCCGGTTATCCCTCCAAATTAG
CCAGGAAGAGGAAGCCAAGCAGCTAGCTACAATGAGCTTCTCCCACGTAAGGTCACTTAC
TGTGTCCACTGAAGTTTTCCAGTTGACGCCAAAACTTTCGGCCTTTCTGGTCTTACGTGT
ATTGAATTTAAAGAAATGTAATGGAGTGAACAATCACCACTTTAAAGATATTTGCAATAT
GTTTCAGCTGAGATATTTGAGTCTCAATGCGAAATTTATTACTGAGATCCCAAGGGAGAT
TCGGAATCTGCAATTTTTGCAAGTACTTGACATAACTAATCTTGGGCACAAAGTAAAGAT
GACAACCATTATTCACTTGCGACAGCTGTTGCGGCTTTGTTCTAGGTCTGGGTGGAGCAT
AAAACAGCTAGACGGATTTGGAAAACTAACCTCTCTACAAGAAGTTAAAGGGACCATAAC
TATCGAGTCACCAAGCATGCTGCATGATCTGGGGTGTCTGACCAATCTCAGGACCTTGGG
CATCAACTTTCGTGATTGGGATGAGAGCTATGAGGAACCTTTCATCCAATGTCTATCTAA
CCTTGTCAGCCTCAAATCCATGAAAATAAAAGGTACCATGATGAGCAGCCTATGTTCCGA
ATGTGACAAATTGTACCCTGGTCCTCAACAACTTTGCTCCATTGATATGAAGTCACTTAG
TACCAAGATGGATGTCATCACTCTGCTCCCTGTCTAGCATAAAGATCACATTATTAGCTC
TGGGAGTACAAGATATCCATGTCCTTGGGAGCATACCATCTCTACGTTGTCTCAGTGTAC
ATGTGAAGGAAACCAGAGATGAAAGGTTGGTCATTGACAAGTGTTATCCATTCCGGTGCC
TAACTGAGATGCAAATCGATTATGAATCCATGGCGGTGGTGTTCGCACCAGGGAGTATGC
AAAACCTCAAAGAACTCCATTTATTGTTCGGGGTGAAAGAGGTAATGCATAAGTACGGTG
ATTGTAACTTTGGTTTGGAGCACCTCATGTCACTTGAGCATGTCTCTGTTAAAACAATGT
ACACTATCATGCCCGAGGAGGTGGAGGCCGTAAAAGATGAATTCCAGAAATCCCTGGACA
TGAATCCTGGCAAGCCCACGTTGATAGTAGATTATTTGTATCCGAAAGAAAGGAAGATTA
GGTCTCAAGCACAAGCAATAAGAGCAGCAATTTTGTTCGCTAATGCAGGCCGCATCCCTG
CTACTGACTGAAGGATTATAAACATTCTCTATCGCCTTGCTAATAAACTGCATATTCCCT
TCTCTAATTGGCACTGCATTCTCAACGTCGCATGGGTACTAGTGGCAAATAAGCTCTCTG
AAGTCATGAATTTTCTACAGATAATGTAACTGCAGTAAATGTCTACGCGCGTGTTTGTAA
AAAAGAGTTCAATATCTACCTTGTAAATACGCCATGTTCATACTCATACAGTA