Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d036008_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:6:65514626:65517557:-1 gene:Zm00001d036008 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase14 description: calcium dependent protein kinase14
Sequence

ATGGCCAGCGGCGGCTCCTCCAGGTACAGCTCGTACAAGGCGCCGGGGCTGCGCGGCGCG
CTGCTGGAGGCGGCGCACGTGTCGTGCCTCGAGGACCGGTACGCGCTGGGCCCGCAGCTG
GGGTGGGGCCAGTTCGGCGTGATCCGGTCCTGCTCCGACCTGGTCACCGGCGAGGCGCTG
GCCTGCAAGTCCATCGCCAAGGGCCGGCTCGTGTCCCCCGACGACGTGCGCGGGGTCAGG
CTGGAGATCGACGTCATGGCGCGCCTGGCGGGCCACCCCAACGTCGTGGGGCTCAAGGCC
GTGTACGAGGACCGCGACTCGGTGCACCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTC
TTCCACCGCCTCCACGAGCGCGGCTGCTTCCCCGAGCGCGAGGCCGCCGCGCTCTTCCGC
CACCTCATGGAGGTCGTCGCGCACTGCCACGCCAAGGGGATCGTGCACCGCGACCTCAAG
CCCGAGAACATCCTCCTCGTCAGCAGGTCGCCCCAGTCGCCGATCAAACTCGCGGACTTT
GGACTCGCCACCTACACCCAGCCTGGCCGAAGCTTGAGCGGCATGGTAGGCAGCCCGTTC
TACATTGCGCCGGAGGTGCTCTCCGGCGGGTACAACGAGGCCGCCGACGTCTGGAGCGCG
GGGGTCATACTCTACATCCTCCTCAGCGGCATCCCGCCGTTTTGGGGCAAGACCAAGTCC
AAGATCTTCGACTGCATCAGGTCCATGGAGCTGCGGTTCCCTTCTGACCCATGGGACAGG
GTTTCTGATTCCGCCAAGGAGCTCGTCACCGGGATGCTGCGGCGCGACCCTAGGCTGCGG
CTCACGGCCAAGCAGGTTCTAGAGCATCCGTGGATGCAGGAACACGCGGACCCACAAGAC
TCGTGCGGGCAGTGCCACGAGACCGGCCTCCAACGGGAGGGCGCCGGCTCGTGCTCCTTC
TCCACGCCGTTGGCGTCGCGGAGCAGGGACGTGAGCTTTGACACGCGTGGCCCCATCGCG
TGGAGGGGTGGGGGCGAGGACGAGGCGACCTGCTGCTCGCCCACGTTCGCCGCCGTCTGC
AGGTCGTCGTTCTCGGCGTTCATCACCGACCCGGCCCCGCCGCCCTGCTCGGCCTCCTCC
GCCTTGGGTGGCTCTGGCTTCTCGTTCGGTGAGCCCTGCGAACCACTTGACGGAGGAGGA
GGAGGAGGGTTCCCGATGCCCATGGCTTCCATGCCGAGCTTCTCGTTCTTCTGCGCGCGG
GACAGCAGCGAGCCAGCTGAGCCACAGCCGGTCGCTGCCTCCTCGACTCCGAGGACGGCG
AGGGGATCCACGCCACGGGGCGTCAACGGCAGGCGGAACCACACGATCGGCGGCGGCGGG
CGGGAGCACCTGGACGTGGCGGTGGAGTCTGTCATCCGCTGGGCGTCGTGCACCAACTTC
TCCACGGCGCCCTCACTTCGGGCCTCCCTCGTATGCTAG

Peptide Sequence

PEP ID

Zm00001d036008_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:6:65514626:65517557:-1 gene:Zm00001d036008 transcript:Zm00001d036008_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase14 description: calcium dependent protein kinase14
Sequence

MASGGSSRYSSYKAPGLRGALLEAAHVSCLEDRYALGPQLGWGQFGVIRSCSDLVTGEAL
ACKSIAKGRLVSPDDVRGVRLEIDVMARLAGHPNVVGLKAVYEDRDSVHLVMELCAGGEL
FHRLHERGCFPEREAAALFRHLMEVVAHCHAKGIVHRDLKPENILLVSRSPQSPIKLADF
GLATYTQPGRSLSGMVGSPFYIAPEVLSGGYNEAADVWSAGVILYILLSGIPPFWGKTKS
KIFDCIRSMELRFPSDPWDRVSDSAKELVTGMLRRDPRLRLTAKQVLEHPWMQEHADPQD
SCGQCHETGLQREGAGSCSFSTPLASRSRDVSFDTRGPIAWRGGGEDEATCCSPTFAAVC
RSSFSAFITDPAPPPCSASSALGGSGFSFGEPCEPLDGGGGGGFPMPMASMPSFSFFCAR
DSSEPAEPQPVAASSTPRTARGSTPRGVNGRRNHTIGGGGREHLDVAVESVIRWASCTNF
STAPSLRASLVC

Transcript Sequence

Transcript ID

Zm00001d036008_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:65514626:65517557:-1 gene:Zm00001d036008 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium dependent protein kinase14 description: calcium dependent protein kinase14
Sequence

GGTGTGGTGGCGCCTCCCCACCATCACCACCAGCCAGCACCACCCCTCCTGCCCCTCTGC
GCTGGCGGGCCGAGCGCCGCGAGCGAGCTGGGCCGCGGGCGGAGGAGGAGTCGAGGCTGA
CCGACCCCGCGGCCGGCGGCGACGAGCGGACGCAGATTCGGCAGCCGTGCGCGGAATGCC
CGTGGAAGGAGGGGAGAGAGGGAGGGCGCAGGCGCAGCTGAGCTGAGCTGAGCCCGCGAG
GTTCGCGGTCTGCGGTGCGGCGGCAGAGGTCTCGCCAGCGCGATGGCCAGCGGCGGCTCC
TCCAGGTACAGCTCGTACAAGGCGCCGGGGCTGCGCGGCGCGCTGCTGGAGGCGGCGCAC
GTGTCGTGCCTCGAGGACCGGTACGCGCTGGGCCCGCAGCTGGGGTGGGGCCAGTTCGGC
GTGATCCGGTCCTGCTCCGACCTGGTCACCGGCGAGGCGCTGGCCTGCAAGTCCATCGCC
AAGGGCCGGCTCGTGTCCCCCGACGACGTGCGCGGGGTCAGGCTGGAGATCGACGTCATG
GCGCGCCTGGCGGGCCACCCCAACGTCGTGGGGCTCAAGGCCGTGTACGAGGACCGCGAC
TCGGTGCACCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCCACCGCCTCCACGAG
CGCGGCTGCTTCCCCGAGCGCGAGGCCGCCGCGCTCTTCCGCCACCTCATGGAGGTCGTC
GCGCACTGCCACGCCAAGGGGATCGTGCACCGCGACCTCAAGCCCGAGAACATCCTCCTC
GTCAGCAGGTCGCCCCAGTCGCCGATCAAACTCGCGGACTTTGGACTCGCCACCTACACC
CAGCCTGGCCGAAGCTTGAGCGGCATGGTAGGCAGCCCGTTCTACATTGCGCCGGAGGTG
CTCTCCGGCGGGTACAACGAGGCCGCCGACGTCTGGAGCGCGGGGGTCATACTCTACATC
CTCCTCAGCGGCATCCCGCCGTTTTGGGGCAAGACCAAGTCCAAGATCTTCGACTGCATC
AGGTCCATGGAGCTGCGGTTCCCTTCTGACCCATGGGACAGGGTTTCTGATTCCGCCAAG
GAGCTCGTCACCGGGATGCTGCGGCGCGACCCTAGGCTGCGGCTCACGGCCAAGCAGGTT
CTAGAGCATCCGTGGATGCAGGAACACGCGGACCCACAAGACTCGTGCGGGCAGTGCCAC
GAGACCGGCCTCCAACGGGAGGGCGCCGGCTCGTGCTCCTTCTCCACGCCGTTGGCGTCG
CGGAGCAGGGACGTGAGCTTTGACACGCGTGGCCCCATCGCGTGGAGGGGTGGGGGCGAG
GACGAGGCGACCTGCTGCTCGCCCACGTTCGCCGCCGTCTGCAGGTCGTCGTTCTCGGCG
TTCATCACCGACCCGGCCCCGCCGCCCTGCTCGGCCTCCTCCGCCTTGGGTGGCTCTGGC
TTCTCGTTCGGTGAGCCCTGCGAACCACTTGACGGAGGAGGAGGAGGAGGGTTCCCGATG
CCCATGGCTTCCATGCCGAGCTTCTCGTTCTTCTGCGCGCGGGACAGCAGCGAGCCAGCT
GAGCCACAGCCGGTCGCTGCCTCCTCGACTCCGAGGACGGCGAGGGGATCCACGCCACGG
GGCGTCAACGGCAGGCGGAACCACACGATCGGCGGCGGCGGGCGGGAGCACCTGGACGTG
GCGGTGGAGTCTGTCATCCGCTGGGCGTCGTGCACCAACTTCTCCACGGCGCCCTCACTT
CGGGCCTCCCTCGTATGCTAGCACTAGCAACGTCGTTCCGCGCGCCGGCGCCGCCAACGC
CGGGCTGAGGGTGAGGAGGAGAATTCCGACGAGACGAGCGGTAGAGAGTGTGCAGTAGCC
TCGAATTGTATAATATATATACAGACACAGTGCTGTTATAGTGGTGATGATAGATTAGAG
AGTGAAGGTGAAGTTGCTACGGAGGGATGGATGCATGGAGATGGAGAGCGAGTGGCAGAG
CTGGAACTGATGTGTTTTATTCTTCGCTGTCACGCTGCTGGTCAGATAAGATTTGGGAAC
GCTGCTGGTCAGATAAGATTTGGGAACACACCTGGCGACGGAGAGAGAAGGCGTCTGATA
ATTTGATATGAACAAGAAGCAACAATGTTCAGGATG