Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d035878_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:6:58271119:58276115:-1 gene:Zm00001d035878 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

ATGCTCCTCCTGCGCGCCAACGCGCTCGCCGCCGTACCGGTGTCCTTCTCCATAACGCCG
GCGGCCTCCTATAGCTGCTTCCCCTGGCCGTCTTCATCCACCACTGCCGCGAGCTGCTCC
GTCGGCTCCTCTGCCAGGCTCGACGCCGCCGTGCAGTACGACCCGCTCCGCCCCGGCTCC
GATGCGTGGGCCCATCCCGACGGCATGGTCACCGCGGAGGGTGACGAGGAGAAACAGCGC
TATGACACGGAGGGGGAGTCCAACGACTGGGAAGGGGAAGGGCCCCAAGGATCATCAGAC
CCCGAGGGCATCAACGTGCCGCGCCAGCGCTACATCGCCGTCCCCAAGGAGGCCCTCCTC
GATGCTGTCCTCTCGCAGTTCGCGTCCGACGACGACGACGCCGCGGACTTCAAGCGCTGC
GCCAGATGCTTGGACGCCATCCTTCACGCCGAGCACAAGAGGATGCTCGAGGAGATGCGC
ACCTCCTACATGCTCACGCAACGCCACCGGGACGAGGAAGAGGAGCAGGATGACACTGAC
ACCGCCTCGGGCTCGGACTACGTCAACGGCAAAGCCGGCTCCGGATTTTTCGGCATCACC
CAACTGGATGGCACGTTGTTCCTTACTAGAAGCGTGGACTTGAGAACTCTGCTCGGATTG
ACCCCAGACCCCGATTCCCAGACCAGAGTTGCTTTTGCAACTCAATTTCAGCGCTCATTC
ATGACCCTACTACGCAATGCTCAGTTTGAAGAACTCTCCGCACAAGATCTGCTCTTGACA
TATGCCCTAAATAACGATTACCTGCTCACGCTGCCCATTTATGTCGACTGGAAGAAGGCT
GCTCAATCTAATGCAATAATATTCAGGCGTGGATACGCGACTGAGAGGCAGAAAGGCCTC
CTGTTGGTTGAGAAACTTGATTACTTGCAATCAAAACTCTTGCAGAATGTCTTTTTCAGC
CTCTCCAAACCCTTGAAAAAGCCAGGGAAATGGCTTAATGAGGCTTTGAAAAGATCAACA
GATAACCAGGGATTTCAGATCTGGATAGACAAACTGAGACTATGGCTTAAAGAGCAAACT
TATGCAGATAATTCACTGCTGTTGATAGAAAGCTCTTCATGGGACAAGCTTAGTTCTGAT
CAGTTACCTGATGCAGATGTTCCTATTTGGATCGCTGCACAAAGGGCAGTCTCTCGTTAT
GAAGGAATTTTGTCACCTGTTGGTCCTCGTGGAAGACTGTTAAGAAGATTGCTTAAATGG
ACTGGACTAATACCTTCTCTGCCAGAAGCAACGATAAAATCCAACAATGAAACTAAACAT
CTTGAAGGACATGTGAGGCCAAACTTTCTACCAAGAATTACCCTTGCTAATATATGGGAA
CCTGCAAGCAGAGAATCTTGCAATAACAATATCTGGGAGATGGTGAAAGCTTCTTTTCGT
ATTCTGTTTGGGAGGTCTACTCTTCAGGAACCAGCATTCCAGGAGTTAATACTACTTTAC
ACTGATGAAGTTGTTCCAAGTGAAACGAAGGACGAGATGGTTCCGCTGCAACTGAAAATT
TATGAGAGGATTCCGATCCCAGATTTGCCAGTAGTTTTCCCCCACAAGAAATTGTCCTTC
CGCATCCTAGATACAGTAAGGCTAGATATTGCTACTGTAATAGGTCTATTGGCATATGTG
GTGAACTACAAATTTGAGAGTTTAGCCTCATCTCCGTAA

Peptide Sequence

PEP ID

Zm00001d035878_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:6:58271119:58276115:-1 gene:Zm00001d035878 transcript:Zm00001d035878_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

MLLLRANALAAVPVSFSITPAASYSCFPWPSSSTTAASCSVGSSARLDAAVQYDPLRPGS
DAWAHPDGMVTAEGDEEKQRYDTEGESNDWEGEGPQGSSDPEGINVPRQRYIAVPKEALL
DAVLSQFASDDDDAADFKRCARCLDAILHAEHKRMLEEMRTSYMLTQRHRDEEEEQDDTD
TASGSDYVNGKAGSGFFGITQLDGTLFLTRSVDLRTLLGLTPDPDSQTRVAFATQFQRSF
MTLLRNAQFEELSAQDLLLTYALNNDYLLTLPIYVDWKKAAQSNAIIFRRGYATERQKGL
LLVEKLDYLQSKLLQNVFFSLSKPLKKPGKWLNEALKRSTDNQGFQIWIDKLRLWLKEQT
YADNSLLLIESSSWDKLSSDQLPDADVPIWIAAQRAVSRYEGILSPVGPRGRLLRRLLKW
TGLIPSLPEATIKSNNETKHLEGHVRPNFLPRITLANIWEPASRESCNNNIWEMVKASFR
ILFGRSTLQEPAFQELILLYTDEVVPSETKDEMVPLQLKIYERIPIPDLPVVFPHKKLSF
RILDTVRLDIATVIGLLAYVVNYKFESLASSP

Transcript Sequence

Transcript ID

Zm00001d035878_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:6:58271119:58276115:-1 gene:Zm00001d035878 gene_biotype:protein_coding transcript_biotype:protein_coding description:aminopeptidases
Sequence

ACGTGGCTCCGGCAGGGCAGAGCGTTTATCCAACTCGGCTCTCAGCGACTGCCCACCACC
ACCACTGAGGATTCCTCTTCCGGCGGCGGCGGCGGCGGCAGCGATGCTCCTCCTGCGCGC
CAACGCGCTCGCCGCCGTACCGGTGTCCTTCTCCATAACGCCGGCGGCCTCCTATAGCTG
CTTCCCCTGGCCGTCTTCATCCACCACTGCCGCGAGCTGCTCCGTCGGCTCCTCTGCCAG
GCTCGACGCCGCCGTGCAGTACGACCCGCTCCGCCCCGGCTCCGATGCGTGGGCCCATCC
CGACGGCATGGTCACCGCGGAGGGTGACGAGGAGAAACAGCGCTATGACACGGAGGGGGA
GTCCAACGACTGGGAAGGGGAAGGGCCCCAAGGATCATCAGACCCCGAGGGCATCAACGT
GCCGCGCCAGCGCTACATCGCCGTCCCCAAGGAGGCCCTCCTCGATGCTGTCCTCTCGCA
GTTCGCGTCCGACGACGACGACGCCGCGGACTTCAAGCGCTGCGCCAGATGCTTGGACGC
CATCCTTCACGCCGAGCACAAGAGGATGCTCGAGGAGATGCGCACCTCCTACATGCTCAC
GCAACGCCACCGGGACGAGGAAGAGGAGCAGGATGACACTGACACCGCCTCGGGCTCGGA
CTACGTCAACGGCAAAGCCGGCTCCGGATTTTTCGGCATCACCCAACTGGATGGCACGTT
GTTCCTTACTAGAAGCGTGGACTTGAGAACTCTGCTCGGATTGACCCCAGACCCCGATTC
CCAGACCAGAGTTGCTTTTGCAACTCAATTTCAGCGCTCATTCATGACCCTACTACGCAA
TGCTCAGTTTGAAGAACTCTCCGCACAAGATCTGCTCTTGACATATGCCCTAAATAACGA
TTACCTGCTCACGCTGCCCATTTATGTCGACTGGAAGAAGGCTGCTCAATCTAATGCAAT
AATATTCAGGCGTGGATACGCGACTGAGAGGCAGAAAGGCCTCCTGTTGGTTGAGAAACT
TGATTACTTGCAATCAAAACTCTTGCAGAATGTCTTTTTCAGCCTCTCCAAACCCTTGAA
AAAGCCAGGGAAATGGCTTAATGAGGCTTTGAAAAGATCAACAGATAACCAGGGATTTCA
GATCTGGATAGACAAACTGAGACTATGGCTTAAAGAGCAAACTTATGCAGATAATTCACT
GCTGTTGATAGAAAGCTCTTCATGGGACAAGCTTAGTTCTGATCAGTTACCTGATGCAGA
TGTTCCTATTTGGATCGCTGCACAAAGGGCAGTCTCTCGTTATGAAGGAATTTTGTCACC
TGTTGGTCCTCGTGGAAGACTGTTAAGAAGATTGCTTAAATGGACTGGACTAATACCTTC
TCTGCCAGAAGCAACGATAAAATCCAACAATGAAACTAAACATCTTGAAGGACATGTGAG
GCCAAACTTTCTACCAAGAATTACCCTTGCTAATATATGGGAACCTGCAAGCAGAGAATC
TTGCAATAACAATATCTGGGAGATGGTGAAAGCTTCTTTTCGTATTCTGTTTGGGAGGTC
TACTCTTCAGGAACCAGCATTCCAGGAGTTAATACTACTTTACACTGATGAAGTTGTTCC
AAGTGAAACGAAGGACGAGATGGTTCCGCTGCAACTGAAAATTTATGAGAGGATTCCGAT
CCCAGATTTGCCAGTAGTTTTCCCCCACAAGAAATTGTCCTTCCGCATCCTAGATACAGT
AAGGCTAGATATTGCTACTGTAATAGGTCTATTGGCATATGTGGTGAACTACAAATTTGA
GAGTTTAGCCTCATCTCCGTAAGTCAGCTTTTCTTCTTGATATAGTTGCTGGTACTGCAC
TCGTCATACTTGTTTTCCGTGTAGCACTGGGCTACAAACAGACCCGGGATAGGTACCAGC
TTCTGGTGAATAAAACCCTCTATGAGAAGACATTGGCAAGTGGGTTCGGCTCGGTTTACT
TCCTTCTCGATGCTTCTGAGCAACAGCAGTACAAAGAAGCACTTTTGGCATATGCCATGT
TGCTCTGCAGAAAGAAGTATGAGGTCTCATCTCGTGCAAGCATAAGAGATGCATGCGAGC
AGTTTATGCACGAGAAATTCGAGGCAAAGATTGAGATGCCGATCGACAAGGCAATGGAGA
CACTGCTGCGGTTGGGGCTGGTGATTGAGCTTCCCACTGATGGTGGGTCGAGCGTGATTG
GTCTCCCATGCTCGGAGGCATACAGGATCCTGAAAAGCCGTTGGGACGGCTTGCTGGAAC
AAGATACAGAACAAGGCTGATTAGAACGAGACATGTACGTTGGTGGCTTGGAGTGGAGTG
GGATGGGATGCCGTGCTGGTACATACTCGACGCGTCGGCAAAGCTCACTCTTGTTTGTAT
GTATACGTACCAGTTGTTGCAGCAAGTGTATATGTGCTAGCTACGTGCATGTATAATCGT
GATCTAGTTTGTTGTACACAAACGATTGCAGTGTATGTATATGGGAGCACATGTTTTTT